Contig 010337:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005E07Sequence311010337 (8)ref|XP_009619069.1|2e-32PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]724007001 (2)ref|XP_006348372.1|6e-125PREDICTED: vam6/Vps39-like protein-like [Solanum tuberosum]
JMFF010J09Sequence549010337 (8)ref|XP_009619069.1|6e-93PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]722010465 (3)ref|XP_004243182.1|4e-80PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]
JMFF050K12Sequence582010337 (8)ref|XP_009777137.1|1e-76PREDICTED: vam6/Vps39-like protein [Nicotiana sylvestris]616007001 (2)ref|XP_009777137.1|3e-74PREDICTED: vam6/Vps39-like protein [Nicotiana sylvestris]
JMFS091F05Sequence621010337 (8)ref|XP_009619069.1|1e-111PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]
JMFS096C08Sequence605010337 (8)ref|XP_009619069.1|1e-107PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]
JMFS134A04Sequence621010337 (8)ref|XP_009619069.1|8e-111PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]
JMSF023C06Sequence664010337 (8)ref|XP_009619069.1|4e-118PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]711010465 (3)ref|XP_004243182.1|4e-79PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]
JMSF033J15Sequence677010337 (8)ref|XP_009619069.1|1e-118PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]214007615 (3)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+             CCCCAAAAGAAGTTCTCCAGATGGAAGTGACACCACAAGAGGGGGGGCAGTCCTCCCT
JMFS091F05+                       AGTTCTCCAGATGGAAGTGACACCACAAGAGGGGGGGCAGTCCTCCCT
JMFS134A04+                                                     GGGGGGGCAGTCCTCCCT
JMFS096C08+                                                                      T
JMSF033J15+              CCCAAAAGAAGTTCTCCAGATGGAAGTGACACCACAAGAGGGGGGGCAGTCCTCCCT
                      ____________________________________________________________
consensus               CCCCAAAAGAAGTTCTCCAGATGGAAGTGACACCACAAGAGGGGGGGCAGTCCTCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           GAAGGAAACACNTCAGACATTGCTCCATTTGTGGTATTCAATATCATGTAATCTCTTCTA
JMFS091F05+           GAAGGAAACACCTCAGACATTGCTCCATTTGTGGTATTCAATATCATGTAATCTCTTCTA
JMFS134A04+           GAAGGAAACACCTCAGACATTGCTCCATTTGTGGTATTCAATATCATGTAATCTCTTCTA
JMFS096C08+           GAAGGAAACACCTCAGACATTGCTCCATTTGTGGTATTCAATATCATGTAATCTCTTCTA
JMSF033J15+           GAAGGAAACACNTCAGACATTGCTCCATTTGTGGTATTCAATATCATGTAATCTCTTCTA
                      ____________________________________________________________
consensus             GAAGGAAACACCTCAGACATTGCTCCATTTGTGGTATTCAATATCATGTAATCTCTTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           ATTCCCAAGCAAATATTATCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
JMFS091F05+           ATTCCCAAGCAAATATTATCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
JMFS134A04+           ATTCCCAAGCAAATATTATCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
JMFS096C08+           ATTCCCAAGCAAATATTATCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
JMFF010J09+            TTCCCAAGCAAATATTATCGCCGCACCAAGACATTGACTTAACCGTATCTGGTACTCCA
JMSF033J15+           ATTCCCAAGCAAATATTATCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
JMFF050K12+                             TCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
                      ____________________________________________________________
consensus             ATTCCCAAGCAAATATTATCGCCGCACCAAGCCATTGACTTAACCGTATCTGGTACTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
JMFS091F05+           AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
JMFS134A04+           AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
JMFS096C08+           AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
JMFF010J09+           AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
JMSF033J15+           AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
JMFF050K12+           AATTCTTNAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
                      ____________________________________________________________
consensus             AATTCTTTAACCTCTACGAAACCCCTTCCTCCGTCATGTCTGAAAATACAAACTCTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
JMFS091F05+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
JMFS134A04+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
JMFS096C08+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
JMFF010J09+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
JMSF033J15+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
JMFF050K12+           TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
                      ____________________________________________________________
consensus             TGTCTCGCGAAGCAAAGATACCCTCTCCTATCGTCCCACGAGTACACATTCGCCCCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
JMFS091F05+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
JMFS134A04+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
JMFS096C08+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
JMFF010J09+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
JMSF033J15+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
JMFF050K12+           GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
                      ____________________________________________________________
consensus             GCCTTCGTAATCACGGCCAGGGTCTCCAAATTGGGCAACCGATGGAACGCGATGGACTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCCCTTG
JMFS091F05+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
JMFS134A04+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
JMFS096C08+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
JMFF010J09+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
JMSF033J15+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
JMFF005E07+                                                           ATAGCCCTCTTG
JMFF050K12+           GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
                      ____________________________________________________________
consensus             GAGAGCGATAAAAGCAGCTCCCGCGACGCGATCACCTCCATTGCCAGCATAGCCCTCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMFS091F05+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMFS134A04+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMFS096C08+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMFF010J09+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMSF033J15+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMFF005E07+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
JMFF050K12+           GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
                      ____________________________________________________________
consensus             GAGAATCCGTTCACAGTCCGTTCCAGGACGTAGCGTTCCTTGCGAAGCTCTGAGGTGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMFS091F05+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMFS134A04+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMFS096C08+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMFF010J09+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMSF033J15+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMFF005E07+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
JMFF050K12+           TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
                      ____________________________________________________________
consensus             TGATGGAACTCCGACGCCGTCGACCGGTCGGAGCGGGTGGATTCGGGTACGTACACGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMFS091F05+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMFS134A04+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMFS096C08+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMFF010J09+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMSF033J15+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMFF005E07+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
JMFF050K12+           AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
                      ____________________________________________________________
consensus             AGCGATCCATCCGAGCAGACGATGAATAAGTTTGAGCCGTACGATTCGACGGCGTCGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
JMFS091F05+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAG                           
JMFS134A04+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
JMFS096C08+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
JMFF010J09+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
JMSF033J15+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
JMFF005E07+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
JMFF050K12+           TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
                      ____________________________________________________________
consensus             TTCGTGGGGCAATCATTGAGGAGCACGAATGAGTCGTAAGCGCTATGCACCATTGTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023C06+           CTCTCC                                                      
JMFS134A04+           CTC                                                         
JMFS096C08+           CTCT                                                        
JMFF010J09+           CTCTCCCCT                                                   
JMSF033J15+           CTCTCCCCTGTCGATCGCT                                         
JMFF005E07+           CTCTCCCCTGTCGATCGCTGAGCTTTCTCAGACGAAAAAGTTGCCAAACTGGCAAAGGT 
JMFF050K12+           CTCTCCCCTGTCGATCGCTGAGCTTTCTCAGACGAAAAAGTTGCCAAACTGGCAAAGGTC
                      ____________________________________________________________
consensus             CTCTCCCCTGTCGATCGCTGAGCTTTCTCAGACGAAAAAGTTGCCAAACTGGCAAAGGTC