Contig 010336:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041O03Sequence645010336 (14)ref|NP_001235332.1|3e-103uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin446010336 (14)ref|XP_006385788.1|1e-47hypothetical protein POPTR_0003s13600g [Populus trichocarpa] gb|ERP63585.1| hypo
JMFF050J02Sequence640010336 (14)ref|NP_001235332.1|2e-103uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin431010336 (14)ref|XP_006385788.1|5e-43hypothetical protein POPTR_0003s13600g [Populus trichocarpa] gb|ERP63585.1| hypo
JMFN008A17Sequence545010336 (14)ref|XP_002303624.1|6e-70ubiquitin conjugating-like enzyme family protein [Populus trichocarpa] gb|ABK955
JMFN011N20Sequence634010336 (14)ref|NP_001235332.1|2e-103uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMFN012O11Sequence625010336 (14)ref|NP_001235332.1|2e-102uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMFN013G17Sequence642010336 (14)ref|NP_001235332.1|3e-103uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMFN032E02Sequence447010336 (14)ref|XP_009604386.1|8e-46PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Nicotiana tomentosiform
JMFN032N21Sequence615010336 (14)ref|NP_001235332.1|2e-102uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMFN033J08Sequence623010336 (14)ref|NP_001235332.1|7e-104uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMFN034O05Sequence643010336 (14)ref|NP_001235332.1|9e-104uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMFN045K01Sequence628010336 (14)ref|NP_001235332.1|8e-104uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin
JMSF013L02Sequence663010336 (14)ref|NP_001235332.1|2e-102uncharacterized protein LOC100305945 [Glycine max] ref|XP_002299494.1| ubiquitin

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032E02+                                                   GAAGAGTATTGCAGAAACCA
                      ____________________________________________________________
consensus                                                     GAAGAGTATTGCAGAAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-              TAGCAACCCCATTAGAGGAGTTGTGAAAAAACAGAATTTGCATTACAAACTTAAAG
JMFN032E02+           CATGTAGCAACCCCATTAGAGGAGTTGTGAAAAAACAGAATTTGCATTACAAACTTAAAG
rJMFF041O03-              TAGCAACCCCATTAGAGGAGTTGTGAAAAAACAGAATTTGCATTACAAACTTAAAG
JMFN034O05+                                                         TTACAAACTTAAAG
rJMSF013L02-                                                  TTTGCATTACAAACTTAGAG
                      ____________________________________________________________
consensus             CATGTAGCAACCCCATTAGAGGAGTTGTGAAAAAACAGAATTTGCATTACAAACTTAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-          TAGAGTTTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
JMFN032E02+           TAGAGTTTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
rJMFF041O03-          TAGAGTTTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
JMFN034O05+           TAGAGTTTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
rJMSF013L02-          TAGAGTTTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTAGTATGGA
JMFN033J08+                  TTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
JMFN045K01+                 TTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
JMFN013G17+               GTTTTAAATAGGGGCAGATTGAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
JMFN011N20+                       TAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
JMFN012O11+                                                                 TATGGA
JMFF041O03+                      ATAGGGGCAGATTCAACCTTGCCCCTCATGTTCAATCATCTA-TATGGA
JMFF050J02+                             CAGATTCAACCTTCCCCNTCATGTTCAATCATCTA-TATGGA
                      ____________________________________________________________
consensus             TAGAGTTTTAAATAGGGGCAGATTCAACCTTTCCCCTCATGTTCAATCATCTA-TATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-          ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN032E02+           ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
rJMFF041O03-          ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN008A17+                                                                 AAGGAG
JMFN034O05+           ACACATACAC-TTCATTNTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
rJMSF013L02-          ACACATACACTTTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN033J08+           ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN045K01+           ACACATACAC-TTCATTNTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN013G17+           ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN011N20+           ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN032N21+               ATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFN012O11+           ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFF041O03+           ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
JMFF050J02+           ACACATACAC-TTCATTTCNATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
                      ____________________________________________________________
consensus             ACACATACAC-TTCATTTTCATAAGTTGTATATAGTGAACAAAGTCACGAGGGGAAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-          CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN032E02+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
rJMFF041O03-          CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN008A17+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN034O05+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
rJMSF013L02-          CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN033J08+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN045K01+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN013G17+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN011N20+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN032N21+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFN012O11+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFF041O03+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
JMFF050J02+           CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
                      ____________________________________________________________
consensus             CTCTCCTCTCTCACAAGGTAGAAACTAACCCATCGCATACTTCTGGGTCCAGCTCCGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-          AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN032E02+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
rJMFF041O03-          AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN008A17+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN034O05+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
rJMSF013L02-          AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN033J08+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN045K01+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN013G17+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN011N20+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN032N21+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFN012O11+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFF041O03+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
JMFF050J02+           AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
                      ____________________________________________________________
consensus             AGTAGTCTCATACTTGCTTCGGTCCGTCTTGTACATGTGAGCGATCTCTGGCACCAGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-          ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN032E02+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
rJMFF041O03-          ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN008A17+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN034O05+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
rJMSF013L02-          ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN033J08+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN045K01+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN013G17+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN011N20+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN032N21+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFN012O11+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFF041O03+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
JMFF050J02+           ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
                      ____________________________________________________________
consensus             ATCATCGGGGTTGGGGTCTGTTAACAGAGAGCAGATAGACAGTAGCACCTTGGAGATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050J02-          AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN032E02+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
rJMFF041O03-          AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN008A17+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN034O05+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
rJMSF013L02-          AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCNAGACAAATGCTCCCATTGCTGTTGAT
JMFN033J08+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN045K01+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN013G17+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN011N20+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFN032N21+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAATTGCTCCCATTGCTGTTGAT
JMFN012O11+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAATTGCTCCCATTGCTGTTGAT
JMFF041O03+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
JMFF050J02+           AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
                      ____________________________________________________________
consensus             AAGTGCTGGACTCCACTGTTCCTTCAAAATGTCAAGACAAATGCTCCCATTGCTGTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032E02+           ATTTGGGTG                                                   
rJMFF041O03-          ATTTGGGTGAAAAAC                                             
JMFN008A17+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN034O05+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
rJMSF013L02-          ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN033J08+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN045K01+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN013G17+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN011N20+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN032N21+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFN012O11+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFF041O03+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
JMFF050J02+           ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
                      ____________________________________________________________
consensus             ATTTGGGTGAAAAACCTTTGTCCTAAAAGCAACCTTAGGTGGCTTGAATGGATAATCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN008A17+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGAC                
JMFN034O05+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
rJMSF013L02-          TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFN033J08+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFN045K01+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFN013G17+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFN011N20+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFN032N21+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFN012O11+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFF041O03+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
JMFF050J02+           TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
                      ____________________________________________________________
consensus             TGGGAAATGAATGGTAACAAGAAATACTCCGCCTGCATAAGGACTGTCAGGTGGACCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034O05+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
rJMSF013L02-          TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFN033J08+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFN045K01+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFN013G17+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFN011N20+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFN032N21+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFN012O11+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFF041O03+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
JMFF050J02+           TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
                      ____________________________________________________________
consensus             TATTGTTGCTTGCCAGTGAAACATATCTTCAGCAACTGGGCCAGCACTGCAAGAGGTAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034O05+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
rJMSF013L02-          AGGATCTTTCTGGAGATCCTTGAGCTCTTTCANAATTCGCTTCGAGGCCATGTCGAACCA
JMFN033J08+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFN045K01+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFN013G17+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFN011N20+           AGGATCTTTCTGGAGATCCTTCAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFN032N21+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFN012O11+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFF041O03+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
JMFF050J02+           AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
                      ____________________________________________________________
consensus             AGGATCTTTCTGGAGATCCTTGAGCTCTTTCAGAATTCGCTTCGAGGCCATGTCGAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034O05+           AAACCCTGAGAGATCCTCCTACTGCGAAA                               
rJMSF013L02-          AAANCCTGAGAGATCCTCCTACTGCGAANGGAGAGATTCTGAG                 
JMFN033J08+           AAACCCTGAGAGATCCTCCTACTGCGAAAGGA                            
JMFN045K01+           AAACCCTGAGAGATCCTCCTACTGCGAAAGGAGA                          
JMFN013G17+           AAACCCTGAGAGATCCTCCTACTGCGAAAGGAGAGATTCTGAGCACCG            
JMFN011N20+           AAACCCTGAGAGATCCTCCTACTGCGAAAGGAGAGATTCTGAGCACCG            
JMFN032N21+           AAACCCT                                                     
JMFN012O11+           AAACCCT                                                     
JMFF041O03+           AAACCCTGAGAGATCCTCCTACTGCGAAAGGAGAGATTCTGAGCACCGAGACTGCGGG  
JMFF050J02+           AAACCCTGAGAGATCCTCCTACTGCGAAAGGAGAGATTCTGAGCACCGAGACTGCGGGGC
                      ____________________________________________________________
consensus             AAACCCTGAGAGATCCTCCTACTGCGAAAGGAGAGATTCTGAGCACCGAGACTGCGGGGC