Contig 010311:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046B24Sequence437010311 (2)ref|XP_009594035.1|185PREDICTED: uncharacterized protein LOC104090605 [Nicotiana tomentosiformis]396004130 (2)
JMFF049K13Sequence512010311 (2)ref|XP_009594035.1|255PREDICTED: uncharacterized protein LOC104090605 [Nicotiana tomentosiformis]509004130 (2)emb|CDP00268.1|1e-28unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF049K13+ GAT
                      ____________________________________________________________
consensus GAT
 
. : . : . : . : . : . :
JMFF049K13+ GAGGGATATCGTGCGTAACAGAGTTCCTCCACGGCGGCAAGCCTCCGTTGGCCCTCAAGA
                      ____________________________________________________________
consensus GAGGGATATCGTGCGTAACAGAGTTCCTCCACGGCGGCAAGCCTCCGTTGGCCCTCAAGA
 
. : . : . : . : . : . :
JMFF049K13+ ACTGCCCATACCTTGTTCTGAGCTTCACCTGATTCCCATCCCTAACCGGCTCCCACTCGA
JMFF046B24+ AACCGGCTCCCACTCGA
                      ____________________________________________________________
consensus ACTGCCCATACCTTGTTCTGAGCTTCACCTGATTCCCATCCCTAACCGGCTCCCACTCGA
 
. : . : . : . : . : . :
JMFF049K13+ CGGAGGAATCAAGGCGGCGGGGCAAAGTTTGCAGCACTTTCCGGCCGGTCATGCCGAGCA
JMFF046B24+ CGGAGGAATCAAGGCGGCGGGGCAAAGTTGNCAGCACTTTCCGGCCGGTCATGCCGAGCA
                      ____________________________________________________________
consensus CGGAGGAATCAAGGCGGCGGGGCAAAGTTTGCAGCACTTTCCGGCCGGTCATGCCGAGCA
 
. : . : . : . : . : . :
JMFF049K13+ GAAACGGCTGGTTGGAAGCCGTCAAGTACTTGCCGTAACAGCTCTTAAGGCGGACGGCGT
JMFF046B24+ GAAACGGCTGGTTGGAAGCCGTCAAGTACTTGCCGTAACAGCTCTTAAGGCGGACGGCGT
                      ____________________________________________________________
consensus GAAACGGCTGGTTGGAAGCCGTCAAGTACTTGCCGTAACAGCTCTTAAGGCGGACGGCGT
 
. : . : . : . : . : . :
JMFF049K13+ TGTCGGTGTTCTCCGGGAACTCCACCGTCCACCGCGCGCTCTTGGCGTTGCCGTTACGGT
JMFF046B24+ TGTCGGTGTTCTCCGGGAACTCCACCGTCCACCGCGCGCTCTTGGCGTTGCCGTTACGGT
                      ____________________________________________________________
consensus TGTCGGTGTTCTCCGGGAACTCCACCGTCCACCGCGCGCTCTTGGCGTTGCCGTTACGGT
 
. : . : . : . : . : . :
JMFF049K13+ CTTGGGTCACCGACTCTTCGTGTTCCTCGGCGGTCAAGTACTTGTCGTGGTGGCTCCTCA
JMFF046B24+ CTTGGGTCACCGACTCTTCGTCTTCCTCGGCGGTCAAGTACTTGTCGTGGTGGCTCCTCA
                      ____________________________________________________________
consensus CTTGGGTCACCGACTCTTCGTGTTCCTCGGCGGTCAAGTACTTGTCGTGGTGGCTCCTCA
 
. : . : . : . : . : . :
JMFF049K13+ ACCGCACCGTCTTAGCTCGGTGGAACATCTCCATGGCTGGGAGATTGAACGAAGGGGTAG
JMFF046B24+ ACCGCACCGTCTTAGCTCGGTGGAACATCTCCATGGCTGGGAGATTGAACGAAGGGGTAG
                      ____________________________________________________________
consensus ACCGCACCGTCTTAGCTCGGTGGAACATCTCCATGGCTGGGAGATTGAACGAAGGGGTAG
 
. : . : . : . : . : . :
JMFF049K13+ TCTGTAGATTATTATAAGGTATATTACAAGCACAAAATGTTAGGAAATTTTGAGGTTTTG
JMFF046B24+ TCTGTGGATTATTATAAGGTATATTACAAGCACAAAATGTTAGGAAATTTTGAGGTTTTG
                      ____________________________________________________________
consensus TCTGTGGATTATTATAAGGTATATTACAAGCACAAAATGTTAGGAAATTTTGAGGTTTTG
 
. : . : . : . : . : . :
JMFF049K13+ AAGAAAAAAATTGGATTAGATGAGACTAT
JMFF046B24+ AAGAAAAAAATTGGATTAGATGAGACTATGATGTTTTGTTTTTCTATTTCTAGTTAACAT
                      ____________________________________________________________
consensus AAGAAAAAAATTGGATTAGATGAGACTATGATGTTTTGTTTTTCTATTTCTAGTTAACAT