Contig 010303:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043D05Sequence602010303 (5)ref|XP_009789240.1|4e-55PREDICTED: probable calcium-binding protein CML36 [Nicotiana sylvestris]541017015ref|XP_011078930.1|9e-35PREDICTED: probable calcium-binding protein CML36 [Sesamum indicum]
JMFF044B01Sequence632010303 (5)ref|XP_009789240.1|8e-48PREDICTED: probable calcium-binding protein CML36 [Nicotiana sylvestris]
JMFN025G17Sequence638010303 (5)ref|XP_009789240.1|5e-68PREDICTED: probable calcium-binding protein CML36 [Nicotiana sylvestris]
JMFN041K20Sequence388010303 (5)ref|XP_009789240.1|1e-14PREDICTED: probable calcium-binding protein CML36 [Nicotiana sylvestris]
JMFS001E02Sequence563010303 (5)ref|XP_009789240.1|3e-49PREDICTED: probable calcium-binding protein CML36 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN025G17+                 TCATGCGCCGGCAGTCCTCTAGCGTGCACCGGGAGTCCCCGATGGTTTTAAACA
JMFF043D05+                                                            GGTTTAAAACA
                      ____________________________________________________________
consensus                   TCATGCGCCGGCAGTCCTCTAGCGTGCACCGGGAGTCCCCGATGGTTTTAAACA
 
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JMFN025G17+           CGCTGAACAACTCCTCCGCCGTGATCTTCCCGTCGTGATCCGTGTCGAAGAAGTCGAATG
JMFS001E02+                                      TCCCGTCGTGATCCGTGTCGAAGAAGTCGAATG
JMFF043D05+           CGCTGAACAACTCTTCCGCCGTGATCTTCCCGTCGTGATCCGTGTCGAAGAAGTCGAATG
                      ____________________________________________________________
consensus             CGCTGAACAACTCTTCCGCCGTGATCTTCCCGTCGTGATCCGTGTCGAAGAAGTCGAATG
 
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JMFN025G17+           CGGCTCTCATCTCGGAGTCGCAGGACGGCGGCGCGAAAGCCGAGCTGAGCGCGCTGAACT
JMFS001E02+           CGGCTCTCATCTCGGAGTCGCAGGACGGCGGCGCGAAAGCCGAGCTGAGCGCGCTGAACT
JMFF043D05+           CGGCTCTCATCTCGGAGTCGCAGGACGGCGGCGCGAAAGCCGAGCTGAGCGCGCTGAACT
JMFF044B01+                                       CGGCGCGAAAGCCGAGCTGAGCGCGCTGAACT
                      ____________________________________________________________
consensus             CGGCTCTCATCTCGGAGTCGCAGGACGGCGGCGCGAAAGCCGAGCTGAGCGCGCTGAACT
 
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JMFN025G17+           CCTCGAGGCTGATGCAGCCGTCGCCGTCCCTGTCCACCTCGCTCAGCATCATTCTCAGCT
JMFS001E02+           CCTCGAGGCTGATGCAGCCGTCGCCGTCCCTGTCCACCTCGCTCAGCATCATTCTCAGCT
JMFF043D05+           CCTCGAGGCTGATGCAGCCGTCGCCGTCCCTGTCCACCTCGCTCAGCATCATTCTCAGCT
JMFF044B01+           CCTCGAGGCTGATGCAGCCGTCGCCGTCCCTGTCCACCTCGCTCAGCATCATTCTCAGCT
                      ____________________________________________________________
consensus             CCTCGAGGCTGATGCAGCCGTCGCCGTCCCTGTCCACCTCGCTCAGCATCATTCTCAGCT
 
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JMFN025G17+           CCTCCTCGCTGGGCGGCTCGGCTCCCACCCGGCTCAGCAGAGCCTCCAGCTCCTCGCTCT
JMFS001E02+           CCTCCTCGCTGGGCGGCTCGGCTCCCACCCGGCTCAGCAGAGCCTCCAGCTCCTCGCTCT
JMFF043D05+           CCTCCTCGCTGGGCGGCTCGGCTCCCACCCGGCTCAGCAGAGCCTCCAGCTCCTCGCTCT
JMFN041K20+                                         GGCTCAGCAGAGCCTCCAGCTCCTCGCTCT
JMFF044B01+           CCTCCTCGCTGGGCGGCTCGGCTCCCACCCGGCTCAGCAGAGCCTCCAGCTCCTCGCTCT
                      ____________________________________________________________
consensus             CCTCCTCGCTGGGCGGCTCGGCTCCCACCCGGCTCAGCAGAGCCTCCAGCTCCTCGCTCT
 
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JMFN025G17+           TAATCTTCCCGTCGTCGTCCCTGTCTATCAGCTTGAACGCCTGCACCAGCTCCGCGTAAA
JMFS001E02+           TAATCTTCCCGTCGTCGTCCCTGTCTATCAGCTTGAACGCCTGCACCAGCTCCGCGTAAA
JMFF043D05+           TAATCTTCCCGTCGTCGTCCCTGTCTATCAGCTTGAACGCCTGCACCAGCTCCGCGTAAA
JMFN041K20+           TAATCTTCCCGTCGTCGTCCCTGTCTATCAGCTTGAACGCCTGCACCAGCTCCGCGTAAA
JMFF044B01+           TAATCTTCCCGTCGTCGTCCCTGTCTATCAGCTTGAACGCCTGCACCAGCTCCGCGTAAA
                      ____________________________________________________________
consensus             TAATCTTCCCGTCGTCGTCCCTGTCTATCAGCTTGAACGCCTGCACCAGCTCCGCGTAAA
 
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JMFN025G17+           CCTCGGAGGAAATCTCCGACCACTCGTCGGGGGAGATCTCGCTGGACAACGCCGGGAGCA
JMFS001E02+           CCTCGGAGGAAATCTCCGACCACTCGTCGGGGGAGATCTCGCTGGACAACGCCGGGAGCA
JMFF043D05+           CCTCGGAGGAAATCTCCGACCACTCGTCGGGGGAGAACTCGCTGGACAACGCCGGGAGCA
JMFN041K20+           CCTCGGAGGAAATCTCCGACCACTCGTCGGGGGAGATCTCGCTGGACAAC-CCGGGAGCA
JMFF044B01+           CCTCGGAGGAAATCTCCGACCACTCGTCGGGGGAGATCTCGCTGGACAACGCCGGGAGCA
                      ____________________________________________________________
consensus             CCTCGGAGGAAATCTCCGACCACTCGTCGGGGGAGATCTCGCTGGACAACGCCGGGAGCA
 
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JMFN025G17+           CGCTGGTGGGCGTCGACAAACCGTTCTTCTTCTTAAAGCCGTTAACCAAGTCACACGAAT
JMFS001E02+           CGCTGGTGGGCGTCGACAAACCGTTCTTCTTCTTAAAGCCGTTAACCAAGTCACACGAAT
JMFF043D05+           CGCTGGTGGGCGTCGACAAACCGTTCTTCTTCTTAAAGCCGTTAACCAAGTCACACGAAT
JMFN041K20+           CGCTGGTGGGCGTCGACAAACCGTTCTTCTTCTTAAAGCCGTTAACCAAGTCACACGAAT
JMFF044B01+           CGCTGGTGGGCGTCGACAAACCGTTCTTCTTCTTAAAGCCGTTAACCAAGTCACACGAAT
                      ____________________________________________________________
consensus             CGCTGGTGGGCGTCGACAAACCGTTCTTCTTCTTAAAGCCGTTAACCAAGTCACACGAAT
 
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JMFN025G17+           CGGACGCTGAAGACGACGTCGTTCCGGAGCTGAACGACGACGGATCATCGGATCTGGAAA
JMFS001E02+           CGGACGCTGAAGACGACGTCGTTCCGGAGCTGAACGACGACGGATCATCGGATCTGGAAA
JMFF043D05+           CGGACGCTGAAGACGACGTCGTTCCGGAGCTGAACGACGACGGATCATCGGATCTGGAAA
JMFN041K20+           CGGACGCTGAAGACGACGTCGTTCCGGAGCTGAACGACGACGGATCATCGGATCTGGAAA
JMFF044B01+           CGGACGCTGAAGACGACGTCGTTCCGGAGCTGAACGACGACGGATCATCGGATCTGGAAA
                      ____________________________________________________________
consensus             CGGACGCTGAAGACGACGTCGTTCCGGAGCTGAACGACGACGGATCATCGGATCTGGAAA
 
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JMFN025G17+           CGGAACGGGACTTCCTGGACTTGAAAAGCTTCTTGGGGTTAGGGATGGCGATGAAGAGCT
JMFS001E02+           CGGAACGGGACTTCCTGGACTTGAAAAGCTTCTTGGGGTTAGGGATGGCGATGAAGAGCT
JMFF043D05+           CGGAACGGGACTTCCTGGACTTGAAAAGCTTCTTGGGGTTAGGGATGGCGATGAAGAGCT
JMFN041K20+           CGGAACGGGACTTCCTGGACTTGAAAAGCTTCTTGGGGTTAGGGATGGCGATGAAGAGCT
JMFF044B01+           CGGAACGGGACTTCCTGGACTTGAAAAGCTTCTTGGGGTTAGGGATGGCGATGAAGAGCT
                      ____________________________________________________________
consensus             CGGAACGGGACTTCCTGGACTTGAAAAGCTTCTTGGGGTTAGGGATGGCGATGAAGAGCT
 
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JMFN025G17+           TCATGGCGGATGGAGAGGAGAGAAGAAGAGAAAGGAAGCCAGAG                
JMFS001E02+           TCATGGCGGATGGAGAGGAGAGAAGAAGAGAAAGGAAGCCAGAGATAGGA          
JMFF043D05+           TCATGGCGGATGGAGAGGAGAGAAGAAGAGAAAGGAAGCCAGAGATAGGA          
JMFN041K20+           TCATGGCGGATGGAGAGGAGAGAAGAAGAGAAAGGAAGCCAGAGATAGGAACGGTTTGG 
JMFF044B01+           TCATGGCGGATGGAGAGGAGAGAAGAAGAGAAAGGAAGCCAGAGATAGGAACGGTTTGGG
                      ____________________________________________________________
consensus             TCATGGCGGATGGAGAGGAGAGAAGAAGAGAAAGGAAGCCAGAGATAGGAACGGTTTGGG
 
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JMFF044B01+           GCTGGGTGGAATGAGAGAGGAATAACAGAGGATTAAATGGAAGAAGCGCGTTGCGGAGGT
                      ____________________________________________________________
consensus             GCTGGGTGGAATGAGAGAGGAATAACAGAGGATTAAATGGAAGAAGCGCGTTGCGGAGGT
 
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JMFF044B01+           AGCCATAGCGGGCTTCCGCGAAGCTTCGTAGTGAGAGAAAGAGGGAAGCTTGGAAAGAGT
                      ____________________________________________________________
consensus             AGCCATAGCGGGCTTCCGCGAAGCTTCGTAGTGAGAGAAAGAGGGAAGCTTGGAAAGAGT