Contig 010298:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043E06Sequence641010298 (2)gb|KHG25207.1|78.2DUF21 domain-containing, chloroplastic -like protein [Gossypium arboreum]580019164gb|KHG25207.1|77.8DUF21 domain-containing, chloroplastic -like protein [Gossypium arboreum]
JMSF011C04Sequence323010298 (2)ref|XP_006355733.1|2e-40PREDICTED: probable prefoldin subunit 3-like [Solanum tuberosum]154019245

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF043E06+ TATAAATCCTTGAGAAACATTTCATCTCATCTGGACTGCCT
                      ____________________________________________________________
consensus TATAAATCCTTGAGAAACATTTCATCTCATCTGGACTGCCT
 
. : . : . : . : . : . :
JMFF043E06+ GGTGTTGTCTGATCTCCATAACTGAACTCCTCGGGCATTTTAATCTCGAGTTCATCAGAT
                      ____________________________________________________________
consensus GGTGTTGTCTGATCTCCATAACTGAACTCCTCGGGCATTTTAATCTCGAGTTCATCAGAT
 
. : . : . : . : . : . :
JMFF043E06+ AGCTGATCAATGGATGTATTAGCATCCACATCAAAGATTCCCTCAGCCCTGAGAACAATG
                      ____________________________________________________________
consensus AGCTGATCAATGGATGTATTAGCATCCACATCAAAGATTCCCTCAGCCCTGAGAACAATG
 
. : . : . : . : . : . :
JMFF043E06+ TAGCCAGTTTTCTTCTGCATCTCTTCGGATTCATTGCTCCCCTTCATGCTCTTCTCAAGG
                      ____________________________________________________________
consensus TAGCCAGTTTTCTTCTGCATCTCTTCGGATTCATTGCTCCCCTTCATGCTCTTCTCAAGG
 
. : . : . : . : . : . :
JMSF011C04+ CACGAACGCCGCCGC
JMFF043E06+ TCCTCAATCCTCTTCTCCATGAACTCAATATCCTGAACAGTTCTTCACGAACACCGCCGC
                      ____________________________________________________________
consensus TCCTCAATCCTCTTCTCCATGAACTCAATATCCTGAACAGTTCTTCACGAACGCCGCCGC
 
. : . : . : . : . : . :
JMSF011C04+ CGGAATTCCTCTCCTCTCCGTCAATCCGGAGGTTGATGAAGAAGTCGCAACCTCCGCCGC
JMFF043E06+ CGAAATTCCTCTCCTCTCCGTTAATCCGGAGGTTGATGATGAAGCCGCAACCAACGCCAC
                      ____________________________________________________________
consensus CGGAATTCCTCTCCTCTCCGTTAATCCGGAGGTTGATGATGAAGTCGCAACCTCCGCCGC
 
. : . : . : . : . : . :
JMSF011C04+ CATCTGCAA
JMFF043E06+ CATCTGCAAGTGGTCTTGTGCTCTGAGCTTTCTTCTTCTTTCTTCTTCGATGGAGCGGCG
                      ____________________________________________________________
consensus CATCTGCAAGTGGTCTTGTGCTCTGAGCTTTCTTCTTCTTTCTTCTTCGATGGAGCGGCG
 
. : . : . : . : . : . :
JMFF043E06+ GTCGTGGGTGTCTGAAGCAGGGGCGGAGACGTCGGCTATGGCGGTGGTAGCAGTGGTGGC
                      ____________________________________________________________
consensus GTCGTGGGTGTCTGAAGCAGGGGCGGAGACGTCGGCTATGGCGGTGGTAGCAGTGGTGGC
 
. : . : . : . : . : . :
JMFF043E06+ GTCGGCAGATCAGCGCTGGAGGCGGTGGCTGCGTCGAGGTTGTCACGGTGTGGTGCGCAT
                      ____________________________________________________________
consensus GTCGGCAGATCAGCGCTGGAGGCGGTGGCTGCGTCGAGGTTGTCACGGTGTGGTGCGCAT
 
. : . : . : . : . : . :
JMFF043E06+ CAGCAGATCGTCGTCACGGTGGAGGTTGTGAGGCCAACGGCGTGGTGGCGGTAGGTGTTG
                      ____________________________________________________________
consensus CAGCAGATCGTCGTCACGGTGGAGGTTGTGAGGCCAACGGCGTGGTGGCGGTAGGTGTTG
 
. : . : . : . : . : . :
JMFF043E06+ TGGCGATGAGACGATCGAAGCAGATGGCGGATGAAGATTTTAGATCTGAGATGCGAATTT
                      ____________________________________________________________
consensus TGGCGATGAGACGATCGAAGCAGATGGCGGATGAAGATTTTAGATCTGAGATGCGAATTT