Contig 010294:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022J18Sequence476010294 (9)gb|AAF64480.1|AF241536_11e-101cysteine protease inhibitor [Ipomoea batatas]708010294 (9)gb|AAF64480.1|AF241536_13e-128cysteine protease inhibitor [Ipomoea batatas]
JMFF042E21Sequence654010294 (9)gb|AAF64480.1|AF241536_19e-142cysteine protease inhibitor [Ipomoea batatas]617010294 (9)gb|AAF64480.1|AF241536_17e-105cysteine protease inhibitor [Ipomoea batatas]
JMFS038E03Sequence644010294 (9)gb|AAD13812.1|3e-101cysteine proteinase inhibitor [Ipomoea batatas]
JMSF007M12Sequence289010294 (9)gb|AAD13812.1|1e-51cysteine proteinase inhibitor [Ipomoea batatas]198014047 (5)
JMSF029E23Sequence695010294 (9)gb|AAF64480.1|AF241536_13e-125cysteine protease inhibitor [Ipomoea batatas]
JMSF045C21Sequence685010294 (9)gb|AAF64480.1|AF241536_12e-154cysteine protease inhibitor [Ipomoea batatas]745010294 (9)gb|AAF64480.1|AF241536_11e-137cysteine protease inhibitor [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF042E21- CTTTCAAACACAAATATTGGTCTTAGATACATTCATACATAGAAC
rJMFF022J18- AATATTGGTCTTAGATACATTCATACATAGAAC
rJMSF029E23- AATATTGGTCTTAGATACATTCATACATAGAAC
rJMSF045C21- AATATTGGTCTTAGATACATTCATACATAGAAC
                      ____________________________________________________________
consensus CTTTCAAACACAAATATTGGTCTTAGATACATTCATACATAGAAC
 
. : . : . : . : . : . :
rJMFF042E21- ATAACAACGAAACATTGGCAGCATACATAGGCTCCAGAATTACTGAACACAAAAGATGTA
rJMFF022J18- ATAACAACGAAACATTGGCAGCATACATAGGCTCCAGAATTACTGAACACAAAAGATGTA
rJMSF029E23- ATAACAACGAAACATTGGCAGCATACATAGGCTCCAGAATTACTGAACACAAAAGATGTA
rJMSF045C21- ATAACAACGAAACATTGGCAGCATACATAGGCTCCAGAATTACTGAACACAAAAGATGTA
                      ____________________________________________________________
consensus ATAACAACGAAACATTGGCAGCATACATAGGCTCCAGAATTACTGAACACAAAAGATGTA
 
. : . : . : . : . : . :
rJMFF042E21- CGATTGATGGGTCCATACTCTTCATTTCTCAAGTTAACAAGGTAAGTTAGGAGTTGGCTG
rJMFF022J18- CGATTGATGGGTCCATACTCTTCATTTCTCAAGTTAACAAGGTAAGTTAGGAGTTGGCTG
rJMSF029E23- CGATTGATGGGTCCATACTCTTCATTTCTCAAGTTAACAAGGTAAGTTAGGAGTTGGCTG
rJMSF045C21- CGATTGATGGGTCCATACTCTTCATTTCTCAAGTTAACAAGGTAAGTTAGGAGTTGGCTG
                      ____________________________________________________________
consensus CGATTGATGGGTCCATACTCTTCATTTCTCAAGTTAACAAGGTAAGTTAGGAGTTGGCTG
 
. : . : . : . : . : . :
rJMFF042E21- GTGCCATATGATTCAAGCGGAAAGCACCTTCATTGTTCTTGTGCACTTCAACGCTGAACT
rJMFF022J18- GTGCCATATGATTCAAGCGGAAAGCACCTTCATTGTTCTTGTGCACTTCAACGCTGAACT
rJMSF029E23- GTGCCATATGATTCAAGCGGAAAGCACCTTCATTGTTCTTGTGCACTTCAACGCTGAACT
rJMSF045C21- GTGCCATATGATTCAAGCGGAAAGCACCTTCATTGTTCTTGTGCACTTCAACGCTGAACT
                      ____________________________________________________________
consensus GTGCCATATGATTCAAGCGGAAAGCACCTTCATTGTTCTTGTGCACTTCAACGCTGAACT
 
. : . : . : . : . : . :
rJMFF042E21- TTTCCTCTTTCTCTCCCCTCTTCGTTTTGATAAGCATATGAACCTTTGCAGAATCATCAA
rJMFF022J18- TTTCCTCTTTCTCTCCCCTCTTCGTTTTGATAAGCATATGAACCTTTGCAGAATCATCAA
rJMSF029E23- TTTCCTCTTTCTCTCCCCTCTTCGTTTTGATAAGCATATGAACCTTTGCAGAATCATCAA
rJMSF045C21- TTTCCTCTTTCTCTCCCCTCTTCGTTTTGATAAGCATATGAACCTTTGCAGAATCATCAA
JMSF045C21+ TTCGTTTTGATAAGCATATGAACCTTTGCAGAATCATCAA
                      ____________________________________________________________
consensus TTTCCTCTTTCTCTCCCCTCTTCGTTTTGATAAGCATATGAACCTTTGCAGAATCATCAA
 
. : . : . : . : . : . :
rJMFF042E21- TAACCTCAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
rJMFF022J18- TAACCTCAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
rJMSF029E23- TAACCTCAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
rJMSF045C21- TAACCTCAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
JMSF045C21+ TAACCTCAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
JMFF042E21+ CAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
                      ____________________________________________________________
consensus TAACCTCAGCATTAGCATGAACTATCTCTTGAAGCTCATAAGGAAGTAGCGAATTGGACC
 
. : . : . : . : . : . :
rJMFF042E21- TTTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
rJMFF022J18- TTTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
rJMSF029E23- TTTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
rJMSF045C21- TTTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
JMSF045C21+ TTTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
JMFF042E21+ TNTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
                      ____________________________________________________________
consensus TTTGTTGGATAGTCTTAACTGCATGCTCTGCAGCTTCTTGGACTACTGGATCATTGACTG
 
. : . : . : . : . : . :
rJMFF042E21- GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
rJMFF022J18- GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
rJMSF029E23- GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
rJMSF045C21- GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
JMSF045C21+ GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
JMFF022J18+ CCCAGATCAGATGAAGTAA
JMFS038E03+ CTCTCTTGGCACCCAGATCAGATGAAGTAA
JMFF042E21+ GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
                      ____________________________________________________________
consensus GAACTGATTTCAGACCTGTGTTTGGGCAGTCTCTCTTGGCACCCAGATCAGATGAAGTAA
 
. : . : . : . : . : . :
rJMFF042E21- GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
rJMFF022J18- GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
rJMSF029E23- GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
rJMSF045C21- GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
JMSF045C21+ GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
JMFF022J18+ GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
JMFS038E03+ GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
JMFF042E21+ GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
                      ____________________________________________________________
consensus GGGTGGGAATATCTTCAATATGATTAAATCCTTGTAGTTCCTTGAAGTTCATCCAGGGCT
 
. : . : . : . : . : . :
rJMFF042E21- TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
rJMFF022J18- TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
rJMSF029E23- TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
rJMSF045C21- TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
JMSF045C21+ TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
JMFF022J18+ TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
JMFS038E03+ TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
JMFF042E21+ TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
                      ____________________________________________________________
consensus TGAGCCAGACCTTAGCCTCGTAAAGTTTCCTCTTTCCAGCGTCAATCACTTCAAGAGTAA
 
. : . : . : . : . : . :
rJMFF042E21- GATGGTGTAATTTTCCAGCAACAACTTGCTCC
rJMFF022J18- GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
rJMSF029E23- GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
rJMSF045C21- GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
JMSF045C21+ GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
JMFF022J18+ GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
JMFS038E03+ GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
JMSF007M12+ CACCAACTCAA
JMFF042E21+ GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
                      ____________________________________________________________
consensus GATGGTGTAATTTTCCAGCAACAACTTGCTCCTCTGACTTCACCACTCTCACCAACTCAA
 
. : . : . : . : . : . :
rJMFF022J18- TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
rJMSF029E23- TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
rJMSF045C21- TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
JMSF045C21+ TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
JMFF022J18+ TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
JMFS038E03+ TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
JMSF007M12+ TCATCGCATTCTCNTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
JMFF042E21+ TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
                      ____________________________________________________________
consensus TCATCGCATTCTCCTTCTTGTTATGCTCCTCGACGGCGAATCGCGCGATGCTGTCAATCT
 
. : . : . : . : . : . :
rJMFF022J18- CGACGCTGTTCTCC
rJMSF029E23- CG
rJMSF045C21- CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTA
JMSF045C21+ CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTAGTAGCCATTC
JMFF022J18+ CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTAGTAGCCATTC
JMFS038E03+ CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTAGTAGCCATTC
JMSF007M12+ CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTAGTAGCCATTC
JMFF042E21+ CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTAGTAGCCATTC
                      ____________________________________________________________
consensus CGACGCTGTTCTCCGCAGAGGCAGAATCGCTAATTCCTCCCAGGGTCGTAGTAGCCATTC
 
. : . : . : . : . : . :
JMSF045C21+ GAATCATGTTATCTTCTCTCTCCCCTCCCCCGCCGCAAAAGCCTGCCGCCTCTTGCGGGT
JMFF022J18+ GAATCAGGTTATCTTCTCTCTCCCCTCCCCCGCCGCAAAAGCCTGCCGCCTCTTGCGGGT
JMFS038E03+ GAATCAGGTTATCTTCTCTCTCCCCTCCCCCGCCGCAAAAGCCTGCCGCCTCTTGCGGGT
JMSF007M12+ GAATCAGGTTATCTTCTCTCTCCCCTCCCCCGCCGCAAAAGCCTGCCGCCTCTTGCGGGT
JMFF042E21+ GAATCAGGTTATCTTCTCTCTCCCCTCCCCCGCCGCAAAAGCCTGCCGCCTCTTGCGGGT
                      ____________________________________________________________
consensus GAATCAGGTTATCTTCTCTCTCCCCTCCCCCGCCGCAAAAGCCTGCCGCCTCTTGCGGGT
 
. : . : . : . : . : . :
JMSF045C21+ GACCCCCGGAATAGGACTGTAAAGTTACCGACGGGAAGAAAACGAGAGTAATCAGAAAAT
JMFF022J18+ GACCCCCGGAATAGGACTGTAAAGTTACCGACGGGAAGAAAACGAGAGTAATCAGAAAAT
JMFS038E03+ GACCCCCGGAATAGGACTGTAAAGTTACCGACGGGAAGAAAACGAGAGTAATCAGAAAAT
JMSF007M12+ GACCCCCGGAATAGGACTGTAAAGTTACCGACGGGAAGAAAACGAGAGTAATCAGAAAAT
JMFF042E21+ GACCCCCGGAATAGGACTGTAAAGTTACCGACGGGAAGAAAACGAGAGTAATCAGAAAAT
                      ____________________________________________________________
consensus GACCCCCGGAATAGGACTGTAAAGTTACCGACGGGAAGAAAACGAGAGTAATCAGAAAAT
 
. : . : . : . : . : . :
JMSF045C21+ ATGCGAAGTAGAAGAACCGAACTCTCATGTCATATAC
JMFF022J18+ ATGCGAAGTAGAAGAACCGAACTCTCATGTCATATAC
JMFS038E03+ ATGCGAAGTAGAA
JMSF007M12+ ATGCGAAGTAGAAGAACCGAACTCTCATGTCATATAC
JMFF042E21+ ATGCGAAGTAGAAGAACCGAACTCTCATGTCATATACTCTTGCCTATCGAGTCTGTGCGT
                      ____________________________________________________________
consensus ATGCGAAGTAGAAGAACCGAACTCTCATGTCATATACTCTTGCCTATCGAGTCTGTGCGT