Contig 010292:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041O01Sequence655010292 (6)emb|CDP01270.1|6e-67unnamed protein product [Coffea canephora]555011221 (2)ref|XP_009800928.1|1e-30PREDICTED: cirhin-like [Nicotiana sylvestris]
JMFF050O03Sequence609010292 (6)emb|CDP01270.1|3e-64unnamed protein product [Coffea canephora]574011221 (2)ref|XP_009800928.1|3e-34PREDICTED: cirhin-like [Nicotiana sylvestris]
JMFS033G11Sequence518010292 (6)emb|CDP01270.1|3e-60unnamed protein product [Coffea canephora]
JMFS064G12Sequence635010292 (6)emb|CDP01270.1|3e-66unnamed protein product [Coffea canephora]
JMFS128D04Sequence589010292 (6)emb|CDP01270.1|4e-65unnamed protein product [Coffea canephora]
JMFS166B11Sequence564010292 (6)emb|CDP01270.1|6e-68unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS166B11+ TGGCAATGA
                      ____________________________________________________________
consensus TGGCAATGA
 
. : . : . : . : . : . :
JMFS166B11+ TTTCTTGTGTGTTAATTCCTCTAAGCTAGAAGCACTATAAATTCGGACACATCCATCATC
JMFS033G11+ GACACATCCATCATC
JMFS128D04+ AAGCTAGAAGCACTATAAATTCGGACACATCCATCATC
JMFS064G12+ AAGCTAGAAGCACTATAAATTCGGACACATCCATCATC
JMFF050O03+ CTATAAATTCGGACACATCCATCATC
JMFF041O01+ AAGCTAGAAGCACTATAAATTCGGACACATCCATCATC
                      ____________________________________________________________
consensus TTTCTTGTGTGTTAATTCCTCTAAGCTAGAAGCACTATAAATTCGGACACATCCATCATC
 
. : . : . : . : . : . :
JMFS166B11+ ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
JMFS033G11+ ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
JMFS128D04+ ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
JMFS064G12+ ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
JMFF050O03+ ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
JMFF041O01+ ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
                      ____________________________________________________________
consensus ACATGCAAAAGCTATGTGACTTTCTTCATTAACATGATCTTCTTCTTCAGAAAGCTCAAC
 
. : . : . : . : . : . :
JMFS166B11+ AGAGTTGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
JMFS033G11+ AGAGTTGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
JMFS128D04+ AGAGTTGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
JMFS064G12+ AGAGTTGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
JMFF050O03+ AGAGTNGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
JMFF041O01+ AGAGTTGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
                      ____________________________________________________________
consensus AGAGTTGTCATCGTCCTCACTGTCCTCACTGTCCTCACTCTCACTGGCATTGCCATTTTC
 
. : . : . : . : . : . :
JMFS166B11+ ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
JMFS033G11+ ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
JMFS128D04+ ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
JMFS064G12+ ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
JMFF050O03+ ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
JMFF041O01+ ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
                      ____________________________________________________________
consensus ATACTGTATTGAATCTGGCTTATCTTGCCGACTAGTGCAGGGTTGTGAAGCCATCTGCCA
 
. : . : . : . : . : . :
JMFS166B11+ TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
JMFS033G11+ TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
JMFS128D04+ TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
JMFS064G12+ TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
JMFF050O03+ TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
JMFF041O01+ TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
                      ____________________________________________________________
consensus TATAGATACGCCTATAGAATCAAGAACAACCTTCTGTCTCAAATCAAATAAATCCCACTC
 
. : . : . : . : . : . :
JMFS166B11+ CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
JMFS033G11+ CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
JMFS128D04+ CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
JMFS064G12+ CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
JMFF050O03+ CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
JMFF041O01+ CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
                      ____________________________________________________________
consensus CGAAACTGATCCATCAATACTCGACGAGAACAACCTTCCTGACGGCGAGCCTCTTGACCC
 
. : . : . : . : . : . :
JMFS166B11+ CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
JMFS033G11+ CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
JMFS128D04+ CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
JMFS064G12+ CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
JMFF050O03+ CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
JMFF041O01+ CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
                      ____________________________________________________________
consensus CAGCCGGCACCAAACCAACGAAGAAATCCTTGAATTAGGATTCCCATGTATTCTAAGTTG
 
. : . : . : . : . : . :
JMFS166B11+ ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
JMFS033G11+ ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
JMFS128D04+ ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
JMFS064G12+ ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
JMFF050O03+ ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
JMFF041O01+ ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
                      ____________________________________________________________
consensus ACAGTGCCAGCCAACGGAGCCGGGAGAGACCAGCCATATTTCAAGAGAGCCGTCCTCGCG
 
. : . : . : . : . : . :
JMFS166B11+ AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
JMFS033G11+ AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
JMFS128D04+ AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
JMFS064G12+ AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
JMFF050O03+ AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
JMFF041O01+ AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
                      ____________________________________________________________
consensus AGCGGCGGCGACCTGGAAGTTGTCGGCGCTGGTGGCTAGGGCTACCACCGGCGATGGTCG
 
. : . : . : . : . : . :
JMFS166B11+ CCATTCATATTCCAC
JMFS033G11+ CCATTCATATTCCACGTGGCCCC
JMFS128D04+ CCATTCATATTCCACGTGGCCCCGATACAGCTCGGGGAATAGCATCTCGTCTGAGGGGAA
JMFS064G12+ CCATTCATATTCCACGTGGCCCCGATACAGCTCGGGGAATAGCATCTCGTCTGAGGGGAA
JMFF050O03+ CCATTCATATTCCACGTGGCCCCGATACAGCTCGGGGAATAGCATCTCGTCTGAGGGGAA
JMFF041O01+ CCATTCATATTCCACGTGGCCCCGATACAGCTCGGGGAATAGCATCTCGTCTGAGGGGAA
                      ____________________________________________________________
consensus CCATTCATATTCCACGTGGCCCCGATACAGCTCGGGGAATAGCATCTCGTCTGAGGGGAA
 
. : . : . : . : . : . :
JMFS128D04+ GGAGGAAACA
JMFS064G12+ GGAGGAAACAGCTCGCAGTCTGAAAGAAGTCTTGAGGAAA
JMFF050O03+ GGAGGAAACAGCTCGCAGTCTGAAAGAAGTCTTGAGGAAA
JMFF041O01+ GGAGGAAACAGCTCGCAGTCTGAAAGAAGTCTTGAGGAAACGGGGAATCGGTCTCGACGA
                      ____________________________________________________________
consensus GGAGGAAACAGCTCGCAGTCTGAAAGAAGTCTTGAGGAAACGGGGAATCGGTCTCGACGA