Contig 010275:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021O03Sequence577007912 (118)ref|XP_007014221.1|9e-36Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr727010275 (3)ref|XP_003638109.1|2e-90Serine/threonine protein phosphatase [Medicago truncatula] sp|Q06009.1|PP2A_MEDS
JMFF030L05Sequence552007912 (118)ref|XP_007014221.1|2e-34Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr717010275 (3)dbj|BAA92699.1|2e-88type 2A protein phosphatase-3 [Vicia faba]
JMFF037I02Sequence238010275 (3)

Alignment

This contig is upended


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rJMFF021O03+                                               TNGAAACTCTTGATAATATCCGT
rJMFF030L05+                                                         TGATAATATCCGT
                      ____________________________________________________________
consensus                                                  TNGAAACTCTTGATAATATCCGT
 
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rJMFF021O03+          AATTTTGATCGTGTACAAGAAGTTCCACATGAAGGGCCAATGTGTGATCTTCTATGGTCT
rJMFF030L05+          AATTTTGATCGTGTACAAGAAGTTCCACATGAAGGGCCAATGTGTGATCTTCTATGGTCT
                      ____________________________________________________________
consensus             AATTTTGATCGTGTACAAGAAGTTCCACATGAAGGGCCAATGTGTGATCTTCTATGGTCT
 
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rJMFF021O03+          GATCCTGACGATCGTTGCGGTTGGGGTATATCACCTAGGGGTGCAGGATATACATTTGGC
rJMFF030L05+          GATCCTGACGATCGTTGCGGTTGGGGTATATCACCTAGGGGTGCAGGATATACATTTGGC
                      ____________________________________________________________
consensus             GATCCTGACGATCGTTGCGGTTGGGGTATATCACCTAGGGGTGCAGGATATACATTTGGC
 
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rJMFF021O03+          CAAGACATATCAGAGCAATTTAACCATACTAACAGCTTGAAGCTTATTGCTAGAGCACAC
rJMFF030L05+          CAAGACATATCAGAGCAATTTAACCATACTAACAGCTTGAAGCTTATTGCTAGAGCACAC
                      ____________________________________________________________
consensus             CAAGACATATCAGAGCAATTTAACCATACTAACAGCTTGAAGCTTATTGCTAGAGCACAC
 
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rJMFF021O03+          CAGCTGGTTATGGATGGATATAACTGGGCTCATGACCAGAAGGTGGTTACCATATTCAGT
rJMFF030L05+          CAGCTGGTTATGGATGGATATAACTGGGCTCATGACCAGAAGGTGGTTACCATATTCAGT
                      ____________________________________________________________
consensus             CAGCTGGTTATGGATGGATATAACTGGGCTCATGACCAGAAGGTGGTTACCATATTCAGT
 
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rJMFF021O03+          GCTCCTAATTATTGTTACCGATGTGGAAATATGGCGTCCATACTGGAAGTTGATGACGGC
rJMFF030L05+          GCTCCTAATTATTGTTACCGATGTGGAAATATGGCGTCCATACTGGAAGTTGATGACGGC
                      ____________________________________________________________
consensus             GCTCCTAATTATTGTTACCGATGTGGAAATATGGCGTCCATACTGGAAGTTGATGACGGC
 
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rJMFF021O03+          AACAAAGGGCACACTTTTATTCAGTTTGAGCCAGCTCCGAGGAGAGGTGAGCCAGACGTA
rJMFF030L05+          AACAAAGGGCACACTTTTATTCAGTTTGAGCCAGCTCCGAGGAGAGGTGAGCCAGACGTA
                      ____________________________________________________________
consensus             AACAAAGGGCACACTTTTATTCAGTTTGAGCCAGCTCCGAGGAGAGGTGAGCCAGACGTA
 
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rJMFF021O03+          ACCCGAAGAACACCAGATTACTTTCTATGGACTACAAGGTGACGTTGCACATCAGATGAG
rJMFF030L05+          ACCCGAAGAACACCAGATTACTTTCTATGAACTACAAGGTGACGTTGCACATCAGATGAG
                      ____________________________________________________________
consensus             ACCCGAAGAACACCAGATTACTTTCTATGGACTACAAGGTGACGTTGCACATCAGATGAG
 
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rJMFF021O03+          TCTCCTACGAATGGCTGTTTAGGAATTGAATTGACGGTTATAATTTTGCTATGGTGATGG
rJMFF030L05+          TCTCCTACGAATGGCTGTTTAGGAATTGAATTGACGGTTATAATTTTGCTATGGTGATGG
                      ____________________________________________________________
consensus             TCTCCTACGAATGGCTGTTTAGGAATTGAATTGACGGTTATAATTTTGCTATGGTGATGG
 
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rJMFF021O03+          TGGGGATGACATAAAGCATGTAGAAATGGCAGATGAAGGTTTTTAATTCTGTTATGTAGT
rJMFF030L05+          TGGGGATGACATAAAGCATGTAGAAATGGCAGATGAAGGTTTTTAATTCTGTTATGTAGT
JMFF037I02-                 TGACATAAAGCATGTAGAAATGGCAGATGAAGGTTTTTAATTCTGTTATGTAGT
                      ____________________________________________________________
consensus             TGGGGATGACATAAAGCATGTAGAAATGGCAGATGAAGGTTTTTAATTCTGTTATGTAGT
 
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rJMFF021O03+          AGTCTTACAGAGATACAATGAAATGAAGTAATTGAAGATGGCGAGACAACATTGCTGCTT
rJMFF030L05+          AGTCTTACAGAGATACAATGAAATGAAGTAATTGAAGATGGCGAGACAACATTGCTGCTT
JMFF037I02-           AGTCTTACAGAGATACAATGAAATGAAGTAATTGAAGATGGCGAGACAACATTGCTGCTT
                      ____________________________________________________________
consensus             AGTCTTACAGAGATACAATGAAATGAAGTAATTGAAGATGGCGAGACAACATTGCTGCTT
 
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rJMFF021O03+          GCTTAGCTTGTACCATTCATGCAAAGCTTGGTTTTGTTCTTTCTTCTTGCATATTTTTGT
rJMFF030L05+          GCTTAGCTTGTACCATTCATGCAAAGCTTGGTTTTGTTCTTTCTTCTTGCATATTTTTGT
JMFF037I02-           GCTTAGCTTGTACCATTCATGCAAAGCTTGGTTTTGTTCTTTCTTCTTGCATATTTTTGT
                      ____________________________________________________________
consensus             GCTTAGCTTGTACCATTCATGCAAAGCTTGGTTTTGTTCTTTCTTCTTGCATATTTTTGT
 
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rJMFF021O03+          TGTTTATTGTAGTAGAAGGATAGAAGGAATGAAGGAATGATCAT                
rJMFF030L05+          TGTTTATTGTAGTAGAAGGATAGAAGGAATGAAGGAATGATCAT                
JMFF037I02-           TGTTTATTGTAGTAGAAGGATAGAAGGAATGAAGGAATGGTCATTTTCTCAAAAAAAAAA
                      ____________________________________________________________
consensus             TGTTTATTGTAGTAGAAGGATAGAAGGAATGAAGGAATGATCATTTTCTCAAAAAAAAAA