Contig 010274:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037G10Sequence555010274 (5)ref|XP_004230573.1|308PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]663002687 (3)ref|XP_009786217.1|176PREDICTED: uncharacterized protein LOC104234359 [Nicotiana sylvestris]
JMFF044G01Sequence626010274 (5)ref|XP_004230573.1|343PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]586002687 (3)ref|XP_004230573.1|114PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]
JMFF044P23Sequence628010274 (5)ref|XP_004230573.1|343PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]623002687 (3)ref|XP_004230573.1|114PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]
JMFS070G09Sequence642010274 (5)ref|XP_004230573.1|352PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]
JMFS081A07Sequence629010274 (5)ref|XP_004230573.1|346PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+                                       AATCCAAACAGAAAATCCGCGTTCCCTGGCTG
JMFF044G01+                                         TCCAAACAGAAAATCCGCGTTCCCTGGCTG
                      ____________________________________________________________
consensus                                         AATCCAAACAGAAAATCCGCGTTCCCTGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           CGGCACCACCGCCGAAGCCGAAGGATTTGTCTGAACAGGGCCGGAATTCAACGCTTCCAC
JMFS070G09+                        GAAGCCGAAGGATTTGTCTGAACAGGGCCGGAATTCAACGCTTCCAC
JMFS081A07+                        GAAGCCGAAGGATTTGTCTGAACAGGGCCGGAATTCAACGCTTCCAC
JMFF044G01+           CGGCACCACCGCCGAAGCCGAAGGATTTGTCTGAACAGGGCCGGAATTCAACGCTTCCAC
JMFF037G10+                                                        ATTCAACGCTTCCAC
                      ____________________________________________________________
consensus             CGGCACCACCGCCGAAGCCGAAGGATTTGTCTGAACAGGGCCGGAATTCAACGCTTCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           AAACCTATCCTTCTCAGATTTCGCATCATCAGAGCCAAAACTCCGGCTCTGCGATATCAC
JMFS070G09+           AAACCTATCCTTCTCAGATTTCGCATCATCAGAGCCAAAACTCCGGCTCTGCGATATCAC
JMFS081A07+           AAACCTATCCTTCTCAGATTTCGCATCATCAGAGCCAAAACTCCGGCTCTGCGATATCAC
JMFF044G01+           AAACCTATCCTTCTCAGATTTCGCATCATCAGAGCCAAAACTCCGGCTCTGCGATATCAC
JMFF037G10+           AAACCTATCCTTCTCAGATTTCGCATCATCAGAGCCAAAACTCCGGCTCTGCGATATCAC
                      ____________________________________________________________
consensus             AAACCTATCCTTCTCAGATTTCGCATCATCAGAGCCAAAACTCCGGCTCTGCGATATCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           CGTAGGAGGATTAGCCGGGAAGATGAACAGCCTCAACCTAGCCGGCTTCGGCGAAGCCCT
JMFS070G09+           CGTAGGAGGATTAGCCGGGAAGATGAACAGCCTCAACCTAGCCGGCTTCGGCGAAGCCCT
JMFS081A07+           CGTAGGAGGATTAGCCGGGAAGATGAACAGCCTCAACCTAGCCGGCTTCGGCGAAGCCCT
JMFF044G01+           CGTAGGAGGATTAGCCGGGAAGATGAACAGCCTCAACCTAGCCGGCTTCGGCGAAGCCCT
JMFF037G10+           CGTAGGAGGATTAGCCGGGAAGATGAACAGCCTCAACCTAGCCGGCTTCGGCGAAGCCCT
                      ____________________________________________________________
consensus             CGTAGGAGGATTAGCCGGGAAGATGAACAGCCTCAACCTAGCCGGCTTCGGCGAAGCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           ATAGAGTCGATCGTACTCATGCATCATGTGCTCCAGATCATCGTCGGTGGTGACGGAAAT
JMFS070G09+           ATAGAGTCGATCGTACTCATGCATCATGTGCTCCAGATCATCGTCGGTGGTGACGGAAAT
JMFS081A07+           ATAGAGTCGATCGTACTCATGCATCATGTGCTCCAGATCATCGTCGGTGGTGACGGAAAT
JMFF044G01+           ATAGAGTCGATCGTACTCATGCATCATGTGCTCCAGATCATCGTCGGTGGTGACGGAAAT
JMFF037G10+           ATAGAGTCGATCGTACTCATGCATCATGTGCTCCAGATCATCGTCGGTGGTGACGGAAAT
                      ____________________________________________________________
consensus             ATAGAGTCGATCGTACTCATGCATCATGTGCTCCAGATCATCGTCGGTGGTGACGGAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           CAGAGCGTCGAGATCTTCTCCGGGGAGCTGGTACTTAAACGACACGGTATCAAAATCACA
JMFS070G09+           CAGAGCGTCGAGATCTTCTCCGGGGAGCTGGTACTTAAACGACACGGTATCAAAATCACA
JMFS081A07+           CAGAGCGTCGAGATCTTCTCCGGGGAGCTGGTACTTAAACGACACGGTATCAAAATCACA
JMFF044G01+           CAGAGCGTCGAGATCTTCTCCGGGGAGCTGGTACTTAAACGACACGGTATCAAAATCACA
JMFF037G10+           CAGAGCGTCGAGATCTTCTCCGGGGAGCTGGTACTTAAACGACACGGTATCAAAATCACA
                      ____________________________________________________________
consensus             CAGAGCGTCGAGATCTTCTCCGGGGAGCTGGTACTTAAACGACACGGTATCAAAATCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           AAGCGAAGCGAGCTTAGAGATAAACTGTGGATACTTAACGTTGCGCTCGACGGAGAGGAT
JMFS070G09+           AAGCGAAGCGAGCTTAGAGATAAACTGTGGATACTTAACGTTGCGCTCGACGGAGAGGAT
JMFS081A07+           AAGCGAAGCGAGCTTAGAGATAAACTGTGGATACTTAACGTTGCGCTCGACGGAGAGGAT
JMFF044G01+           AAGCGAAGCGAGCTTAGAGATAAACTGTGGATACTTAACGTTGCGCTCGACGGAGAGGAT
JMFF037G10+           AAGCGAAGCGAGCTTAGAGATAAACTGTGGATACTTAACGTTGCGCTCGACGGAGAGGAT
                      ____________________________________________________________
consensus             AAGCGAAGCGAGCTTAGAGATAAACTGTGGATACTTAACGTTGCGCTCGACGGAGAGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           CTTGGTCTCGCCGCCGATGTAAGTGAGCTGGTTGTCGTGCGGGCGGGGGTGGATTTTGCC
JMFS070G09+           CTTGGTCTCGCCGCCGATGTAAGTGAGCTGGTTGTCGTGCGGGCGGGGGTGGATTTTGCC
JMFS081A07+           CTTGGTCTCGCCGCCGATGTAAGTGAGCTGGTTGTCGTGCGGGCGGGGGTGGATTTTGCC
JMFF044G01+           CTTGGTCTCGCCGCCGATGTAAGTGAGCTGGTTGTCGTGCGGGCGGGGGTGGATTTTGCC
JMFF037G10+           CTTGGTCTCGCCGCCGATGTAAGTGAGCTGGTTGTCGTGCGGGCGGGGGTGGATTTTGCC
                      ____________________________________________________________
consensus             CTTGGTCTCGCCGCCGATGTAAGTGAGCTGGTTGTCGTGCGGGCGGGGGTGGATTTTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           ACCGTAACTGCACATGAATTTGACCTTGTAGTTAGGCGGAAGCGGCTGATTCGGATCCTC
JMFS070G09+           ACCGTAACTGCACATGAATTTGACCTTGTAGTTAGGCGGAAGCGGCTGATTCGGATCCTC
JMFS081A07+           ACCGTAACTGCACATGAATTTGACCTTGTAGTTAGGCGGAAGCGGCTGATTCGGATCCTC
JMFF044G01+           ACCGTAACTGCACATGAATTTGACCTTGTAGTTAGGCGGAAGCGGCTGATTCGGATCCTC
JMFF037G10+           ACCGTAACTGCACATGAATTTGACCTTGTAGTTAGGCGGAAGCGGCTGATTCGGATCCTC
                      ____________________________________________________________
consensus             ACCGTAACTGCACATGAATTTGACCTTGTAGTTAGGCGGAAGCGGCTGATTCGGATCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           CCACGGCGGATTTTCGAACTCGATTTCACGGGACCGCGGCGAGGAGTCGCCGGACTCCGG
JMFS070G09+           CCACGGCGGATTTTCGAACTCGATTTCACGGGACCGCGGCGAGGAGTCGCCGGACTCCGG
JMFS081A07+           CCACGGCGGATTTTCGAACTCGATTTCACGGGACCGCGGCGAGGAGTCGCCGGACTCCGG
JMFF044G01+           CCACGGCGGATTTTCGAACTCGATTTCACGGGACCGCGGCGAGGAGTCGCCGGACTCCGG
JMFF037G10+           CCACGGCGGATTTTCGAACTCGATTTCACGGGACCGCGGCGAGGAGTCGCCGGACTCCGG
                      ____________________________________________________________
consensus             CCACGGCGGATTTTCGAACTCGATTTCACGGGACCGCGGCGAGGAGTCGCCGGACTCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF044P23+           ATAAGAGGTGTACGAGTAGTTCTCCATGGATGGAGGGAGAAGAGTGTGGCTGATCT    
JMFS070G09+           ATAAGAGGTGTACGAGTAGTTCTCCATGGATG                            
JMFS081A07+           ATAAGAGGTGTACGAGTAG                                         
JMFF044G01+           ATAAGAGGTGTACGAGTAGTTCTCCATGGATGGAGGGAGAAGAGTGTGGCTGATCT    
JMFF037G10+           ATAAGAGGTGTACGAGTAGTTCTCCATGGATGGAGGGAGAAGAGTGTGGCTGATCTGAGT
                      ____________________________________________________________
consensus             ATAAGAGGTGTACGAGTAGTTCTCCATGGATGGAGGGAGAAGAGTGTGGCTGATCTGAGT