Contig 010264:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034B10Sequence231010264 (2)742006897 (3)ref|XP_009626682.1|9e-42PREDICTED: growth-regulating factor 1-like [Nicotiana tomentosiformis]
JMSF040O18Sequence591010264 (2)ref|XP_004238069.1|8e-15PREDICTED: growth-regulating factor 1-like [Solanum lycopersicum]856006897 (3)ref|XP_009626682.1|3e-62PREDICTED: growth-regulating factor 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF040O18+                                                     GTTGNGAAGATAAGGAGG
                      ____________________________________________________________
consensus                                                       GTTGNGAAGATAAGGAGG
 
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JMSF040O18+           AATAGGNACATTTGCAGTTATGTANTTTNGATCAAAGCNTGGTGTTCCAGNTCCNTNCNN
                      ____________________________________________________________
consensus             AATAGGNACATTTGCAGTTATGTANTTTNGATCAAAGCNTGGTGTTCCAGNTCCNTNCNN
 
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JMSF040O18+           TGAGATGGAGTGAATGGNCNTNTCANTNCANTTANTAANCCATGCATGTTCCCAGAATTC
                      ____________________________________________________________
consensus             TGAGATGGAGTGAATGGNCNTNTCANTNCANTTANTAANCCATGCATGTTCCCAGAATTC
 
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JMSF040O18+           AATCNTCCATANCNTGAGTTTNTGNTAAAAGNGGCATGGTAAGANGGCAATGGCAGTGTN
                      ____________________________________________________________
consensus             AATCNTCCATANCNTGAGTTTNTGNTAAAAGNGGCATGGTAAGANGGCAATGGCAGTGTN
 
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JMSF040O18+           TGNGAGTTGGCAGAAGAGAAANTGAGCATTTGCTGGCCGGATTCAGAGATTCCATTGGCA
                      ____________________________________________________________
consensus             TGNGAGTTGGCAGAAGAGAAANTGAGCATTTGCTGGCCGGATTCAGAGATTCCATTGGCA
 
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JMSF040O18+           TTAGATNTCAGTATAGNGGCGGTGGAAGTTTTAGCAAACTTGGTTTCTNTCCAGTCATNT
                      ____________________________________________________________
consensus             TTAGATNTCAGTATAGNGGCGGTGGAAGTTTTAGCAAACTTGGTTTCTNTCCAGTCATNT
 
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JMSF040O18+           TCGCCGGCCANCGCCGGCGGCGGCGGCCTTTCNTGCTTTAGAAATCCGCCAGATCCACAC
                      ____________________________________________________________
consensus             TCGCCGGCCANCGCCGGCGGCGGCGGCCTTTCNTGCTTTAGAAATCCGCCAGATCCACAC
 
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JMSF040O18+           CANTTCAGTTTGGTNTCAACATCAGAAACAGCAGAGAAAACACTAGCAGTTGCTGGCAAC
                      ____________________________________________________________
consensus             CANTTCAGTTTGGTNTCAACATCAGAAACAGCAGAGAAAACACTAGCAGTTGCTGGCAAC
 
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JMSF040O18+           ACCCCAGTATNTAAACCCCCCAACACCCCCCCAAAATCCATCCTAAAAAGGGAGACCAGA
JMFF034B10+                        AACCCCCCAACACCCCCCCAAAATCCATCCTAAAAAGGGAGACCAGA
                      ____________________________________________________________
consensus             ACCCCAGTATNTAAACCCCCCAACACCCCCCCAAAATCCATCCTAAAAAGGGAGACCAGA
 
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JMSF040O18+           CCAGACCAGACCACACACCTAAAAACACAACAACAACAACAGACAGTGGAGACAATAACT
JMFF034B10+           CCAGACCAGACCACACACCTAAAAACACAACAACAACAACAGACAGTGGAGACAATAACT
                      ____________________________________________________________
consensus             CCAGACCAGACCACACACCTAAAAACACAACAACAACAACAGACAGTGGAGACAATAACT
 
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JMSF040O18+           ACATAAACACAAACAGACGAGAGTAGTCCCTT                            
JMFF034B10+           ACATAAACACAAACAGACGAGAGTAGTCCCTTGATTTCTTGGAGAAATGACCATTCTTAT
                      ____________________________________________________________
consensus             ACATAAACACAAACAGACGAGAGTAGTCCCTTGATTTCTTGGAGAAATGACCATTCTTAT
 
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JMFF034B10+           TAAAGATGATCCTTCTTTGAGGTCCCGGACACTGGGCGCGTGACTGTATAGGTGCTTATT
                      ____________________________________________________________
consensus             TAAAGATGATCCTTCTTTGAGGTCCCGGACACTGGGCGCGTGACTGTATAGGTGCTTATT