Contig 010262:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033I21Sequence533010262 (2)ref|XP_009777829.1|2e-40PREDICTED: beclin-1-like protein isoform X3 [Nicotiana sylvestris]761011216 (2)ref|NP_001275491.1|5e-95beclin-1-like protein-like [Solanum tuberosum] emb|CAJ27524.1| beclin 1 protein
JMFF050D21Sequence638010262 (2)ref|XP_009777814.1|1e-61PREDICTED: beclin-1-like protein isoform X1 [Nicotiana sylvestris]601011216 (2)ref|NP_001275491.1|3e-84beclin-1-like protein-like [Solanum tuberosum] emb|CAJ27524.1| beclin 1 protein

Alignment

This contig is upended


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JMFF050D21+ CATGC
                      ____________________________________________________________
consensus CATGC
 
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JMFF050D21+ ATTCAAGACATAAAGGCTGCTCATTCTGGGTTTGTGTTGTGGCAATGTCAAAGGCACGTT
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consensus ATTCAAGACATAAAGGCTGCTCATTCTGGGTTTGTGTTGTGGCAATGTCAAAGGCACGTT
 
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JMFF050D21+ TTAGGATGGTGATAGTGGAATTAAAGCCTGAATTATTTGGTTGAGTAGGGGTACTGGTAG
                      ____________________________________________________________
consensus TTAGGATGGTGATAGTGGAATTAAAGCCTGAATTATTTGGTTGAGTAGGGGTACTGGTAG
 
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JMFF050D21+ GTCCATCTTCTTGTGATGGCAGATTGGTTCCAGTTCCATCAGATGCACTCGCATACTGAT
JMFF033I21+ TTCTTGTGATGGCAGATTGGTTCCAGTTCCATCAGATGCACTCGCATACTGAT
                      ____________________________________________________________
consensus GTCCATCTTCTTGTGATGGCAGATTGGTTCCAGTTCCATCAGATGCACTCGCATACTGAT
 
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JMFF050D21+ ACACTGAAGCGGCTGGTGGAGGCAACACCACAAAAGACTCTTCCATTGCCCTACCAAA--
JMFF033I21+ ACACTGAAGCGGCTGGTGGAGGCAACACCACAAAAGACTCTTCCATTGCCCTACCAAACT
                      ____________________________________________________________
consensus ACACTGAAGCGGCTGGTGGAGGCAACACCACAAAAGACTCTTCCATTGCCCTACCAAACT
 
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JMFF050D21+ GGCTTGAATCGGGTGGATTGGTTACTCCTCGAGTGCGAGAAGGAACCCCCA-CCCCATGA
JMFF033I21+ GGCTTGAATCGGGTGGATTGGTTACTCCTCGAGTGCGAGAAGGAACCCCCACCCCCATGA
                      ____________________________________________________________
consensus GGCTTGAATCGGGTGGATTGGTTACTCCTCGAGTGCGAGAAGGAACCCCCACCCCCATGA
 
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JMFF050D21+ TTTTTTTGCTTGGGTAACACAACAAATGAATTCTCCATACGTGTAGACCCTGTTACACTG
JMFF033I21+ TTTTTTTGCTTGGGTAACACAACAAATGAATTCTCCATACGTGTAGACCCTGTTACACTG
                      ____________________________________________________________
consensus TTTTTTTGCTTGGGTAACACAACAAATGAATTCTCCATACGTGTAGACCCTGTTACACTG
 
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JMFF050D21+ CCTGCTCCATGGATAGAAGAACCCTGCATAGCAGAGCGAGATGAAGAGGAGGAGGAGTCG
JMFF033I21+ CCAGCTCCATGGATAGAAGAACCCTGCATAGCAGAGCGAGATGAAGAGGAGGAGGAGTCG
                      ____________________________________________________________
consensus CCTGCTCCATGGATAGAAGAACCCTGCATAGCAGAGCGAGATGAAGAGGAGGAGGAGTCG
 
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JMFF050D21+ GCGCCGAAGAGCTTGTCAGCATAAGAATCAACGCCAACTACGCAAAAGGAATTATGGCAG
JMFF033I21+ GCGCCGAAGAGCTTGTCAGCATAAGAATCAACGCCAACTACGCAAAAGGAATTATGGCAG
                      ____________________________________________________________
consensus GCGCCGAAGAGCTTGTCAGCATAAGAATCAACGCCAACTACGCAAAAGGAATTATGGCAG
 
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JMFF050D21+ TTTTGGCAGAGATAGCGGGGGAGATTTGGGTCGACGGGTAAAGTCCGACCCTTATCGGAG
JMFF033I21+ TTTTGGCAGAGATAGCGGGGGAGATTTGGGTCGACGGGTAAAGTCCGACCCTTATCGGAG
                      ____________________________________________________________
consensus TTTTGGCAGAGATAGCGGGGGAGATTTGGGTCGACGGGTAAAGTCCGACCCTTATCGGAG
 
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JMFF050D21+ TTATTATTGCTGCTTTTCTTCATTGCTTTGATGAATTAGCTTCTAGTCTAGAGATATGGG
JMFF033I21+ TTATTATTGCTGCTTTTCTTCATTGCTTTGATGAATTAGCTTCTAGTCTAGAGATATGGG
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consensus TTATTATTGCTGCTTTTCTTCATTGCTTTGATGAATTAGCTTCTAGTCTAGAGATATGGG
 
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JMFF050D21+ TGAAGAGGTTTGGAAGAATTAAAGCGTTTCCAAGTT
JMFF033I21+ TGAAGAGGTTTGGAAGAATTAAAGCGTTTCCAAGTTGATCAAACTGATGTGATTATCAGT
                      ____________________________________________________________
consensus TGAAGAGGTTTGGAAGAATTAAAGCGTTTCCAAGTTGATCAAACTGATGTGATTATCAGT