Contig 010257:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033C04Sequence554010257 (5)emb|CDO97985.1|1e-32unnamed protein product [Coffea canephora]760014880emb|CDO97985.1|4e-49unnamed protein product [Coffea canephora]
JMSF004I22Sequence320010257 (5)ref|XP_004252355.1|91.3PREDICTED: uncharacterized protein LOC101247111 [Solanum lycopersicum]134024458
JMSF025C06Sequence657010257 (5)gb|KDO66921.1|8e-50hypothetical protein CISIN_1g010845mg [Citrus sinensis]669004270 (3)ref|XP_010032983.1|9e-36PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochond
JMSF041A14Sequence534010257 (5)gb|KDO66921.1|4e-60hypothetical protein CISIN_1g010845mg [Citrus sinensis]634004270 (3)gb|EYU36039.1|3e-48hypothetical protein MIMGU_mgv1a004976mg [Erythranthe guttata]
JMSF043G16Sequence792010257 (5)ref|XP_009783220.1|7e-110PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochond739004270 (3)emb|CDP09204.1|1e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043G16+ TCTTCAT
                      ____________________________________________________________
consensus TCTTCAT
 
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JMSF043G16+ CGCTAATTCCGGGCACATCAGACAGCATCAGGTTTAGGAGGAGTTTTCTCCTTATTTCTT
                      ____________________________________________________________
consensus CGCTAATTCCGGGCACATCAGACAGCATCAGGTTTAGGAGGAGTTTTCTCCTTATTTCTT
 
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JMSF043G16+ GAGCATGGTAAACTTCCCGAAGAAAGATAGCATGTTCCATCACTCCCTTAATTCCAAAGG
                      ____________________________________________________________
consensus GAGCATGGTAAACTTCCCGAAGAAAGATAGCATGTTCCATCACTCCCTTAATTCCAAAGG
 
. : . : . : . : . : . :
JMSF043G16+ TTAAGGCTTTTGCTCCCGCGGCAACTACCAACTTGTCATACGAGATACTGAAGTCCCATG
                      ____________________________________________________________
consensus TTAAGGCTTTTGCTCCCGCGGCAACTACCAACTTGTCATACGAGATACTGAAGTCCCATG
 
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JMSF041A14+ TCCATCTGTCGCTGTTTGGCACTTTATTGTATGGTTGTTGAAAT
JMSF043G16+ GCTCAGGAGTTTCAACTCCATCTGTCGCTGTTTGGCACTTTATTGTATGGTTGTTGAAAT
                      ____________________________________________________________
consensus GCTCAGGAGTTTCAACTCCATCTGTCGCTGTTTGGCACTTTATTGTATGGTTGTTGAAAT
 
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JMSF041A14+ CAATTCCAGAACAAGTAGCAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
JMSF043G16+ CAATTCCAGAACAAGTAGCAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
JMSF025C06+ CAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
                      ____________________________________________________________
consensus CAATTCCAGAACAAGTAGCAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
 
. : . : . : . : . : . :
JMSF041A14+ GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
JMSF043G16+ GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
JMSF025C06+ GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
                      ____________________________________________________________
consensus GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
 
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JMSF041A14+ CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
JMSF043G16+ CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
JMSF025C06+ CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
                      ____________________________________________________________
consensus CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
 
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JMSF041A14+ TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
JMSF043G16+ TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
JMSF025C06+ TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
                      ____________________________________________________________
consensus TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
 
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JMSF041A14+ GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCG
JMSF043G16+ GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCGCCGCCAC
JMSF025C06+ GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCGCCGCCAC
                      ____________________________________________________________
consensus GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCGCCGCCAC
 
. : . : . : . : . : . :
JMSF043G16+ TCTTTGCTTCCGTACTAAACAACAGACACTGGGTTAGTGACGGCGGCGCAGCCGCCGGGA
JMSF025C06+ TCTTTGCTTCCGTACTAAACAACAGACACTGGGTTAGTGACGGCGGCGCAGCCGCCGGGA
                      ____________________________________________________________
consensus TCTTTGCTTCCGTACTAAACAACAGACACTGGGTTAGTGACGGCGGCGCAGCCGCCGGGA
 
. : . : . : . : . : . :
JMSF043G16+ ACGCCGCCTTGAACGATGATTGTTTGCGGGTAGTGGCGGTGGTGA
JMSF004I22+ GTGGTGGTTGCCGTGG
JMSF025C06+ ACGCCGCCTTGAACGATGATTGTTTGCGGGTAGTGGCGGTGGTGATGGTGGTTGCCGTGG
JMFF033C04+ TGGTGGTTGCCGCGG
                      ____________________________________________________________
consensus ACGCCGCCTTGAACGATGATTGTTTGCGGGTAGTGGCGGTGGTGATGGTGGTTGCCGTGG
 
. : . : . : . : . : . :
JMSF004I22+ TGGAACATGAGGTTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
JMSF025C06+ TGGAACATGAGGTTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
JMFF033C04+ TGGAACATGAGGCTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
                      ____________________________________________________________
consensus TGGAACATGAGGTTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
 
. : . : . : . : . : . :
JMSF004I22+ TTGAGATCAAGCATAAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCTGCC
JMSF025C06+ TTGAGATCAAGCATAAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCTGCC
JMFF033C04+ TTGAGATCAAGCATTAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCCGCC
                      ____________________________________________________________
consensus TTGAGATCAAGCATAAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCTGCC
 
. : . : . : . : . : . :
JMSF004I22+ CTCACAATGCTCCAAAACTTCTTCGCTATCACCGGCAAATTGTTTGGCTCCATCTCTG
JMSF025C06+ CTCACAATGCTCCAAAACTTCTTCGCTATCACCGGCAAATTGTTTGGCTCCATCTCTG
JMFF033C04+ CTCACAATGCTCCAAAACTTCTTCGCTATGACTGGCAAATTGTTTGGCTCCATCTCTGAT
                      ____________________________________________________________
consensus CTCACAATGCTCCAAAACTTCTTCGCTATCACCGGCAAATTGTTTGGCTCCATCTCTGAT
 
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JMFF033C04+ CTGATCTGTGTATAATTCTCTGTTGGAAGTGCAATATTATTTGAGGGAGAGAGAGAGATT
                      ____________________________________________________________
consensus CTGATCTGTGTATAATTCTCTGTTGGAAGTGCAATATTATTTGAGGGAGAGAGAGAGATT
 
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JMFF033C04+ TAGACTTTAGAGAGAAAAACGAAAGAGAGGTTATTTAATTTGTTGTGATTTTCGTATGAG
                      ____________________________________________________________
consensus TAGACTTTAGAGAGAAAAACGAAAGAGAGGTTATTTAATTTGTTGTGATTTTCGTATGAG