Contig 010254:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032F02Sequence571010254 (2)ref|XP_009630349.1|3e-63PREDICTED: protein YIPF5 homolog [Nicotiana tomentosiformis] ref|XP_009791147.1|106013878 (2)
JMSF003E24Sequence368010254 (2)ref|XP_009630349.1|5e-20PREDICTED: protein YIPF5 homolog [Nicotiana tomentosiformis] ref|XP_009791147.1|749013878 (2)ref|XP_009630349.1|2e-63PREDICTED: protein YIPF5 homolog [Nicotiana tomentosiformis] ref|XP_009791147.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF032F02+ GAAGATCGGCCTTGACTCGGAAAGGGTTAAG
                      ____________________________________________________________
consensus GAAGATCGGCCTTGACTCGGAAAGGGTTAAG
 
. : . : . : . : . : . :
JMFF032F02+ AATCGAAATAGTTTTCTGGTAAATTTGCTTGGTATTGATCCCGAGCTCCTCGAGAAGCGG
                      ____________________________________________________________
consensus AATCGAAATAGTTTTCTGGTAAATTTGCTTGGTATTGATCCCGAGCTCCTCGAGAAGCGG
 
. : . : . : . : . : . :
JMFF032F02+ CGGCTCATCCTCAAAACCAGTGGATCCGCCGCCGATGGTGGTGGAGGCGAACTGCGGGGT
                      ____________________________________________________________
consensus CGGCTCATCCTCAAAACCAGTGGATCCGCCGCCGATGGTGGTGGAGGCGAACTGCGGGGT
 
. : . : . : . : . : . :
JMSF003E24+ ACCGATGTCGAAAGACATAAAGGGGATGCTAGG
JMFF032F02+ GGAGAACGAGGTGGACGCCGCGGCGGAACCGATGTCGAAAGACATAAAGGGGATGCTAGG
                      ____________________________________________________________
consensus GGAGAACGAGGTGGACGCCGCGGCGGAACCGATGTCGAAAGACATAAAGGGGATGCTAGG
 
. : . : . : . : . : . :
JMSF003E24+ GTTCGAAGACTTGGGTGGCTGAAACGGCGCTGTGGGCAGACGACGTTGCTGCGGGGCCGG
JMFF032F02+ GTTCGAAGACTTGGGTGGCTGAAACGGCGCTGTGGGCAGACGACGTTGCTGCGGGGCCGG
                      ____________________________________________________________
consensus GTTCGAAGACTTGGGTGGCTGAAACGGCGCTGTGGGCAGACGACGTTGCTGCGGGGCCGG
 
. : . : . : . : . : . :
JMSF003E24+ GTTCCCGCCGCCGGACGGGAATACCACCGGCGGCACATTGAATTCCCTCGCCATCGATCG
JMFF032F02+ GTTCCCGCCGCCGGACGGGAATACCACCGGCGGCACATTGAATTCCCTCGCCATCGATCG
                      ____________________________________________________________
consensus GTTCCCGCCGCCGGACGGGAATACCACCGGCGGCACATTGAATTCCCTCGCCATCGATCG
 
. : . : . : . : . : . :
JMSF003E24+ TAGATCTGCCAGAGCTAATACTAACAAAAGGAGTTAAAAATCGACTTCCTTTAATTGAAG
JMFF032F02+ TAGATCTGCCAGAGCTAATACTAACAAAAGGAGTTAAAAATCGACGTCCTTTAATTGAAG
                      ____________________________________________________________
consensus TAGATCTGCCAGAGCTAATACTAACAAAAGGAGTTAAAAATCGACTTCCTTTAATTGAAG
 
. : . : . : . : . : . :
JMSF003E24+ CTGCTGAGAAAAATCAGCAGAAAATTGAAAACTTGAGCACAAGTGTTAAGTTGTAAATCG
JMFF032F02+ CTGCTGAGAAAATTCAGCAGAAAATTGAAAACTTGAGCACAAGTGTTAAGTTGTAAATCG
                      ____________________________________________________________
consensus CTGCTGAGAAAATTCAGCAGAAAATTGAAAACTTGAGCACAAGTGTTAAGTTGTAAATCG
 
. : . : . : . : . : . :
JMSF003E24+ GATTTCGGAAGCGTAAAGATGGAAGACGAAGCTCGCTTCCTTTAGAACTACGAACGATAT
JMFF032F02+ GATTTCGGAAGCGTAAAGATGGAAGACGAAGCTCGCTTCCTTTAGAACTACGAACGATAT
                      ____________________________________________________________
consensus GATTTCGGAAGCGTAAAGATGGAAGACGAAGCTCGCTTCCTTTAGAACTACGAACGATAT
 
. : . : . : . : . : . :
JMSF003E24+ GCAATTGCTCTCTGCCCGACTTAAGATCTT
JMFF032F02+ GCAATTGCTCTCTGCCCGACTTAAGATCTTCAGCGCTAAGGCACGAATTAGGGCTAAATT
                      ____________________________________________________________
consensus GCAATTGCTCTCTGCCCGACTTAAGATCTTCAGCGCTAAGGCACGAATTAGGGCTAAATT