Contig 010249:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012F20Sequence467010249 (5)gb|EYU24754.1|2e-51hypothetical protein MIMGU_mgv1a0035152mg, partial [Erythranthe guttata]
JMFF020B06Sequence553010249 (5)gb|EYU24754.1|5e-51hypothetical protein MIMGU_mgv1a0035152mg, partial [Erythranthe guttata]
JMFF020B10Sequence517010249 (5)gb|EYU24754.1|1e-41hypothetical protein MIMGU_mgv1a0035152mg, partial [Erythranthe guttata]129024342
JMFF030B07Sequence402010249 (5)gb|KJB37591.1|2e-18hypothetical protein B456_006G212500 [Gossypium raimondii]
JMFF038K07Sequence479010249 (5)gb|KJB37591.1|2e-16hypothetical protein B456_006G212500 [Gossypium raimondii]903006385 (80)ref|XP_009114489.1|1e-131PREDICTED: polyubiquitin-like [Brassica rapa]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF020B10+ CTTTCACTTGAAAC
JMFF020B06+ TGAGGGAAGGGAAGTAAAAGAAACTCCCAATCTGGTCTTTCACTTGAAAC
JMFF012F20+ AGGGAAGGGAAGTAAAAGAAACTCCCAATCTGGTCTTTCACTTGAAAC
                      ____________________________________________________________
consensus TGAGGGAAGGGAAGTAAAAGAAACTCCCAATCTGGTCTTTCACTTGAAAC
 
. : . : . : . : . : . :
JMFF020B10+ TGATAAGTCCAGTTCCATTTTGCAGGTATTGGGCAGTTTGTACCCAACACCCCATCTTGC
JMFF020B06+ TGATAAGTCCAGTTCCATTTTGCAGGTATTGGGCAGTTTGTACCCAACACCCCATCTTGC
JMFF012F20+ TGATAAGTCCAGTTCCATTTTGCAGGTATTGGGCAGTTTGTACCCAACACCCCATCTTGC
                      ____________________________________________________________
consensus TGATAAGTCCAGTTCCATTTTGCAGGTATTGGGCAGTTTGTACCCAACACCCCATCTTGC
 
. : . : . : . : . : . :
JMFF020B10+ CAAGAACTCTTCCTCTGCTGAACACCAGACCAGTGCATGAGTAGTTCTTCATCCAATTTG
JMFF020B06+ CAAGAACTCTTCCTCTGCTGAACACCAGACCAGTGCATGAGTAGTTCTTCATCCAATTTG
JMFF012F20+ CAAGAACTCTTCCTCTGCTGAACACCAGACCAGTGCATGAGTAGTTCTTCATCCAATTTG
JMFF038K07+ ACCAGTGCATGAGTAGTTCTTCATCCAATTTG
JMFF030B07+ TGAACACCAGACCAGTGCATGAGTAGTTCTTCATCCAATTTG
                      ____________________________________________________________
consensus CAAGAACTCTTCCTCTGCTGAACACCAGACCAGTGCATGAGTAGTTCTTCATCCAATTTG
 
. : . : . : . : . : . :
JMFF020B10+ TTCTTTACATTAACAACAACATTGTAGTTAGTAGTTACATTGATAACAGGCCCTGGAAAT
JMFF020B06+ TTCTTTACATTAACAACAACATTGTAGTTAGTAGTTACATTGATAACAGGCCCTGGAAAT
JMFF012F20+ TTCTTTACATTAACAACAACATTGTAGTTAGTAGTTACATTGATAACAGGCCCTGGAAAT
JMFF038K07+ TTCTTTACATTAACAACAACATTGTAGTTAGTAGTTACATTGATAACAGGCCCTGGAAAT
JMFF030B07+ TTCTTTACATTAACAACAACATTGTAGTTAGTAGTTACATTGATAACAGGCCCTGGAAAT
                      ____________________________________________________________
consensus TTCTTTACATTAACAACAACATTGTAGTTAGTAGTTACATTGATAACAGGCCCTGGAAAT
 
. : . : . : . : . : . :
JMFF020B10+ TTCCCATTAACAGCAATAACCTGTTGTTCCACACCAAGAGGAGAAGCAGTAATGTAGGAG
JMFF020B06+ TTCCCATTAACAGCAATAACCTGTTGTTCCACACCAAGAGGAGAAGCAGTAATGTAGGAG
JMFF012F20+ TTCCCATTAACAGCAATAACCTGTTGTTCCACACCAAGAGGAGAAGCAGTAATGTAGGAG
JMFF038K07+ TTCCCATTAACAGCAATAACCTGTTGTTCCACACCAAGAGGAGAAGCAGTAATGTAGGAG
JMFF030B07+ TTCCCATTAACAGCAATAACCTGTTGTTCCACACCAAGAGGAGAAGCAGTAATGTAGGAG
                      ____________________________________________________________
consensus TTCCCATTAACAGCAATAACCTGTTGTTCCACACCAAGAGGAGAAGCAGTAATGTAGGAG
 
. : . : . : . : . : . :
JMFF020B10+ ACCTCAAAGTCATAGAAAGCAAATGGATCTTC
JMFF020B06+ ACCTCAAAGTCATAGAAAGCAAATGGATCTTC
JMFF012F20+ ACCTCAAAGTCATAGAAAGCAAATGGATCTTCAGCTGAACACAACCCCAGCAGCAACACA
JMFF038K07+ ACCTCAAAGTCATAGAAAGCAAATGGATCTTCAGCTGAACACAACCCCAGCAGCAACACA
JMFF030B07+ ACCTCAAAGTCATAGAAAGCAAATGGATCTTCAGCTGAACACAACCCCAGCAGCAACACA
                      ____________________________________________________________
consensus ACCTCAAAGTCATAGAAAGCAAATGGATCTTCAGCTGAACACAACCCCAGCAGCAACACA
 
. : . : . : . : . : . :
JMFF012F20+ GAAATGCAGAGCAGCATTGACAGAGTAGAGGCCATTCTTGAATTGGAAGCTCAAAGTGCA
JMFF038K07+ GAAATGCAGAGCAGCATTGACAGAGTAGAGGCCATTCTTGAATTGGAAGCTCAAAGTGCA
JMFF030B07+ GAAATGCAGAGCAGCATTGACAGAGTAGAGGCCATTCTTGAATTGGAAGCTCAAAGTGCA
                      ____________________________________________________________
consensus GAAATGCAGAGCAGCATTGACAGAGTAGAGGCCATTCTTGAATTGGAAGCTCAAAGTGCA
 
. : . : . : . : . : . :
JMFF012F20+ AAGTGCAAAGTTACAAGCCAGAAAAACAAGAAAATTTGCACTTTTTTTCTTACATTAT
JMFF038K07+ AAGTGCAAAGTTACAAGCCAGAAAAACAAGAAAATTTGCACTTTTTTTCTTACATTATAG
JMFF030B07+ AAGTGCAAAGTTACAAGCCAGAAAAACAAGAAAATTTGCACTTTTTTTCTTACATTATAG
                      ____________________________________________________________
consensus AAGTGCAAAGTTACAAGCCAGAAAAACAAGAAAATTTGCACTTTTTTTCTTACATTATAG
 
. : . : . : . : . : . :
JMFF038K07+ ACAGGAGGGGGAAAGGAAATGGAAAGATTATGGAGGGAGGAACAAAAAGCACAGTAT
JMFF030B07+ ACAGGAGGGGGAAAGGAAATGGAAAGATTATGGAGGGAGGAACAAAAAGCACAGTATGTA
                      ____________________________________________________________
consensus ACAGGAGGGGGAAAGGAAATGGAAAGATTATGGAGGGAGGAACAAAAAGCACAGTATGTA