Contig 010240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026P20Sequence537010240 (2)ref|XP_004243555.1|4e-64PREDICTED: short-chain dehydrogenase reductase 3a [Solanum lycopersicum] ref|XP_771010240 (2)ref|XP_009618143.1|5e-127PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF026P20- GAGACCG
                      ____________________________________________________________
consensus GAGACCG
 
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rJMFF026P20- CGTAATACTTTTTTAATTATAATGTACTCCGTAACACTTTTTATAAAGATATAGAAAAAT
                      ____________________________________________________________
consensus CGTAATACTTTTTTAATTATAATGTACTCCGTAACACTTTTTATAAAGATATAGAAAAAT
 
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rJMFF026P20- ATTACATTTTAAGTAAGACGGTTTTACTCAAGACTAGAAGAGTTACTTATTAGAGAATAA
                      ____________________________________________________________
consensus ATTACATTTTAAGTAAGACGGTTTTACTCAAGACTAGAAGAGTTACTTATTAGAGAATAA
 
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rJMFF026P20- CCAAGCATATATGTTTTACATATATGATCGCATCCGAGGCCTTACTAATGATTGAGCGCC
                      ____________________________________________________________
consensus CCAAGCATATATGTTTTACATATATGATCGCATCCGAGGCCTTACTAATGATTGAGCGCC
 
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rJMFF026P20- ATCGACAAAGGTGGTGGTTCCAGTCATGTAACGCGAGTCATCACTGATTAAATAGATGAC
                      ____________________________________________________________
consensus ATCGACAAAGGTGGTGGTTCCAGTCATGTAACGCGAGTCATCACTGATTAAATAGATGAC
 
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rJMFF026P20- GGTTGAAGCGAGGTCCTTTTCAACGTCAAGCCAACGGTTGAGAGGCGCTGCTTCCCCGAC
                      ____________________________________________________________
consensus GGTTGAAGCGAGGTCCTTTTCAACGTCAAGCCAACGGTTGAGAGGCGCTGCTTCCCCGAC
 
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rJMFF026P20- CAACTTCTCTGCCCGCTCTTTTCCAACTGATAATGGATACTCGTCGTGGAGATGCAAGCC
                      ____________________________________________________________
consensus CAACTTCTCTGCCCGCTCTTTTCCAACTGATAATGGATACTCGTCGTGGAGATGCAAGCC
 
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rJMFF026P20- CCGAGCAATTCCATTCACCCTGATTTGGTGCTTGCCCATCTCCATTGCAGATAGCCTGAC
                      ____________________________________________________________
consensus CCGAGCAATTCCATTCACCCTGATTTGGTGCTTGCCCATCTCCATTGCAGATAGCCTGAC
 
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rJMFF026P20- TAGCTGTTGGACCCCGGCCAAACATGAGCCATATGCAGCAGCGCCTTGATATAGTCCTCT
                      ____________________________________________________________
consensus TAGCTGTTGGACCCCGGCCAAACATGAGCCATATGCAGCAGCGCCTTGATATAGTCCTCT
 
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rJMFF026P20- CTCCGCCCCTATGATCGAGGACAAATATACAATGGATCCTCCAGATTTTGTGTCCCGCAT
                      ____________________________________________________________
consensus CTCCGCCCCTATGATCGAGGACAAATATACAATGGATCCTCCAGATTTTGTGTCCCGCAT
 
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rJMFF026P20- TCTTTTGCACACAGATTTCAACAAAAACCAAGCCGCCATGAAGTTTATCTTGACAATCTT
JMFF026P20+ CACAGATTTCAACAAAAACCAAGCCGCCATGAAGTTTATCTTGACAATCTT
                      ____________________________________________________________
consensus TCTTTTGCACACAGATTTCAACAAAAACCAAGCCGCCATGAAGTTTATCTTGACAATCTT
 
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rJMFF026P20- CTTGAACTCATCTTCGCCCAACTGCAGAGGATCTTGCATCTTCCCTTCATAAGTATAGCA
JMFF026P20+ CTTGAACTCATCTTCGCCCAACTGCAGAGGATCTTGCATCTTCCCTTCATAAGTATAGCA
                      ____________________________________________________________
consensus CTTGAACTCATCTTCGCCCAACTGCAGAGGATCTTGCATCTTCCCTTCATAAGTATAGCA
 
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rJMFF026P20- GTGTACTAAAGCATCCAAACAGCCCAAAATCTTCCACGCCTTCTCCACTGCTTCATCAAA
JMFF026P20+ GTGTACTAAAGCATCCAAACAGCCCAAAATCTTCCACGCCTTCTCCACTGCTTCATCAAA
                      ____________________________________________________________
consensus GTGTACTAAAGCATCCAAACAGCCCAAAATCTTCCACGCCTTCTCCACTGCTTCATCAAA
 
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rJMFF026P20- AGCCGCTTCTCTTTCTTCTTCCATATTCAAGCCCACAACCTCCA
JMFF026P20+ AGCCGCTTCTCTTTCTTCTTCCATATTCAAGCCCACAACCTCCACTACCACAACACTACC
                      ____________________________________________________________
consensus AGCCGCTTCTCTTTCTTCTTCCATATTCAAGCCCACAACCTCCACTACCACAACACTACC
 
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JMFF026P20+ ATCTAGAGATTGCTTTATCATCTTAGCTACACTCTTCAGTCGGCTCTCGTTTCCCATTAA
                      ____________________________________________________________
consensus ATCTAGAGATTGCTTTATCATCTTAGCTACACTCTTCAGTCGGCTCTCGTTTCCCATTAA
 
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JMFF026P20+ AACCAACTGGCAACCCCGCTGTGCTAAATGGCGGGCAATGTTGTTGCAGATCTCATCACC
                      ____________________________________________________________
consensus AACCAACTGGCAACCCCGCTGTGCTAAATGGCGGGCAATGTTGTTGCAGATCTCATCACC
 
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JMFF026P20+ ATTGGAGGTAAGCAAAACCTTCTTTCCAGGATTTTCCATGCTCCAAACCGATTCAGGAAT
                      ____________________________________________________________
consensus ATTGGAGGTAAGCAAAACCTTCTTTCCAGGATTTTCCATGCTCCAAACCGATTCAGGAAT
 
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JMFF026P20+ AGATCAACTCTCTGTTGCCGTGCGTCCGGAAAAGCCGAATGCAGAACACCAGAACGCAAT
                      ____________________________________________________________
consensus AGATCAACTCTCTGTTGCCGTGCGTCCGGAAAAGCCGAATGCAGAACACCAGAACGCAAT
 
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JMFF026P20+ TGGCTTTTGTAGAAACACCGCACAGAAAAACCGAACTCCGAACAGCAGAGAGTAATTGCT
                      ____________________________________________________________
consensus TGGCTTTTGTAGAAACACCGCACAGAAAAACCGAACTCCGAACAGCAGAGAGTAATTGCT