Contig 010239:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007D02Sequence242010239 (3)ref|XP_010262557.1|1e-10PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo nucifera]749013623 (4)
JMFF026P11Sequence470010239 (3)ref|XP_010262557.1|3e-27PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo nucifera]728013623 (4)
JMSF015I20Sequence442010239 (3)ref|XP_010262557.1|2e-27PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo nucifera]782013623 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF007D02+ ACAACTCAAA
                      ____________________________________________________________
consensus ACAACTCAAA
 
. : . : . : . : . : . :
JMFF007D02+ CCCCCTCCCTCCTCCACCCCCTTCGCCGCCGCCATCCGACGGCCCTCGGAGAACAATGAC
JMSF015I20+ CTCCACCCCCTTNGCCGCCGCCATCCGACGGCCCTCGGAGAACAATGAC
JMFF026P11+ CTCCACCCCCTTCGCCGCCGCCATCCGACGGCCCTCGGAGAACAATGAC
                      ____________________________________________________________
consensus CCCCCTCCCTCCTCCACCCCCTTCGCCGCCGCCATCCGACGGCCCTCGGAGAACAATGAC
 
. : . : . : . : . : . :
JMFF007D02+ GGGATTAAACGGCGAACGGTCCCAACCATTCCTTCTGCTCCTCCGGAGTCGCGGACTCGA
JMSF015I20+ GGGATTAAACGGCGAACGGTCCCAACCATTCCTTCTGCTCCTCCGGAGTCGCGGACTCGA
JMFF026P11+ GGGATTAAACGGCGAACGGTCCCAACCATTCCTTCTGCTCCTCCGGAGTCGCGGACTCGA
                      ____________________________________________________________
consensus GGGATTAAACGGCGAACGGTCCCAACCATTCCTTCTGCTCCTCCGGAGTCGCGGACTCGA
 
. : . : . : . : . : . :
JMFF007D02+ CCCGGAGCTCCGATCCAAATTCCGCATCATGAACATCGCCGACGACGGGAATCTCCGCCG
JMSF015I20+ CCCGGAGCTCCGATCCAAATTCCGCATCATGAACATCGCCGACGACGGGAATCTCCGCCG
JMFF026P11+ CCCGGAGCTCCGATCCAAATTCCGCATCATGAACATCGCCGACGACGGGAATCTCCGCCG
                      ____________________________________________________________
consensus CCCGGAGCTCCGATCCAAATTCCGCATCATGAACATCGCCGACGACGGGAATCTCCGCCG
 
. : . : . : . : . : . :
JMFF007D02+ TTGAGAATCCAAGGCGGAGGATCGGTTCGAATTGTCGATTTCCTCCACAAAC
JMSF015I20+ TTGAGAATCCAAGGCGGAGGATCGGTTCGAATTGTCGATTTCCTCCACAAACCCGCTATT
JMFF026P11+ TTGAGAATCCAAGGCGGAGGATCGGTTCGAATTGTCGATTTCCTCCACAAACCCGCTATT
                      ____________________________________________________________
consensus TTGAGAATCCAAGGCGGAGGATCGGTTCGAATTGTCGATTTCCTCCACAAACCCGCTATT
 
. : . : . : . : . : . :
JMSF015I20+ GCAATCCGGACACGCTACCGAACCCTGGCTCCAAACCCTCACAAACCTATTGCATCTGTA
JMFF026P11+ GCAATCCGGACACGCTACCGAACCCTGGCTCCAAACCCTCACAAACCTATTGCATCTGTA
                      ____________________________________________________________
consensus GCAATCCGGACACGCTACCGAACCCTGGCTCCAAACCCTCACAAACCTATTGCATCTGTA
 
. : . : . : . : . : . :
JMSF015I20+ GCACCAATACGTTGAAGGCATCGACATCTCTATATATAGGATCTAAAATTCACGATAAAT
JMFF026P11+ GCACCAATACGTTGAAGGCATCGACATCTCTATATATAGGATCTAAAATTCACGATAAAT
                      ____________________________________________________________
consensus GCACCAATACGTTGAAGGCATCGACATCTCTATATATAGGATCTAAAATTCACGATAAAT
 
. : . : . : . : . : . :
JMSF015I20+ GGATACGAAAAATCAAATCTTTGGATGAAAAGATTGTGAAAATTTGAACCTTTTTTTGTG
JMFF026P11+ GGATACGAAAAATCAAATCTTTGGATGAAAAGATTGTGAAAATTTGAACCTTTTTTTGTG
                      ____________________________________________________________
consensus GGATACGAAAAATCAAATCTTTGGATGAAAAGATTGTGAAAATTTGAACCTTTTTTTGTG
 
. : . : . : . : . : . :
JMSF015I20+ AATATTCCGGCGGGTTACACACGGAGGAGGCT
JMFF026P11+ AATATTCCGGCGGGTTACACACGGAGGAGGCTGAAGGAAGGGTGTGAGTTGTGAGAGACC
                      ____________________________________________________________
consensus AATATTCCGGCGGGTTACACACGGAGGAGGCTGAAGGAAGGGTGTGAGTTGTGAGAGACC