Contig 010231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024O09Sequence564010231 (2)781010231 (2)ref|XP_009767492.1|1e-63PREDICTED: uncharacterized protein At5g64816-like [Nicotiana sylvestris] ref|XP

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF024O09- TGGAGTATAACATCGAAATACA
                      ____________________________________________________________
consensus TGGAGTATAACATCGAAATACA
 
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rJMFF024O09- TGATCCACAGTTTCNATGGCTGGGTATCCTTCATTAGAGGTCTTCAACACAGTTCTTGAA
                      ____________________________________________________________
consensus TGATCCACAGTTTCNATGGCTGGGTATCCTTCATTAGAGGTCTTCAACACAGTTCTTGAA
 
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rJMFF024O09- GAAATGCGGGAGCANAAAAAGAAAAAATGGTTGCGGATCAAGACAAAGAAGAAGTTGAGA
                      ____________________________________________________________
consensus GAAATGCGGGAGCANAAAAAGAAAAAATGGTTGCGGATCAAGACAAAGAAGAAGTTGAGA
 
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rJMFF024O09- GGCGAAGGCACTCACTTTGACACCTCTTCAGGCAAATGTCATTCCAGTTAGGCACTTGAT
                      ____________________________________________________________
consensus GGCGAAGGCACTCACTTTGACACCTCTTCAGGCAAATGTCATTCCAGTTAGGCACTTGAT
 
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rJMFF024O09- GCTGGTTAACACACACCGTCCGTGCACATGCGTCAGCGCAAGCATCGAGCTCGGAAACAC
                      ____________________________________________________________
consensus GCTGGTTAACACACACCGTCCGTGCACATGCGTCAGCGCAAGCATCGAGCTCGGAAACAC
 
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rJMFF024O09- CACAAACAGTGACACAGGTATCGGGCATTGGGTCTTTAGAAAATGCACCAACCTTCTTCA
                      ____________________________________________________________
consensus CACAAACAGTGACACAGGTATCGGGCATTGGGTCTTTAGAAAATGCACCAACCTTCTTCA
 
. : . : . : . : . : . :
rJMFF024O09- ACATCCTCTTCGAAGTACAAACCCTCTCGCACACAAATATATCATCTGAGTTCTTTTCGC
                      ____________________________________________________________
consensus ACATCCTCTTCGAAGTACAAACCCTCTCGCACACAAATATATCATCTGAGTTCTTTTCGC
 
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rJMFF024O09- GTCCTCTGGCCCTCTTTAGCCTCTGCTCATCATCTCGTCTCTTCTTCATCCTGAAAGCTT
                      ____________________________________________________________
consensus GTCCTCTGGCCCTCTTTAGCCTCTGCTCATCATCTCGTCTCTTCTTCATCCTGAAAGCTT
 
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rJMFF024O09- GACCTGCCAGTACAGCTGGAACAGCTGCCCCCAGTAAAGACCACCATAATTCCACCATCA
                      ____________________________________________________________
consensus GACCTGCCAGTACAGCTGGAACAGCTGCCCCCAGTAAAGACCACCATAATTCCACCATCA
 
. : . : . : . : . : . :
rJMFF024O09- CTGCTGCTTGAAAACTAAATTCTTGGACCTCTTTGTTTATAGTCTTGCCCTTCCAAGTCA
JMFF024O09+ ATAGTCTTGCCCTTCCAAGTCA
                      ____________________________________________________________
consensus CTGCTGCTTGAAAACTAAATTCTTGGACCTCTTTGTTTATAGTCTTGCCCTTCCAAGTCA
 
. : . : . : . : . : . :
rJMFF024O09- ATGAAACCATTATGGAGGAGTTTTCTTAATGTAGCCCAGAGTTGAGTTGTCCACTTAATA
JMFF024O09+ ATGAAACCATTATGGAGGAGTTTTCTTAATGTAGCCCAGAGTTGAGTTGTCCACTTAATA
                      ____________________________________________________________
consensus ATGAAACCATTATGGAGGAGTTTTCTTAATGTAGCCCAGAGTTGAGTTGTCCACTTAATA
 
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rJMFF024O09- GCTTCCAGCAGCCCTCCTCATATTTGAACCTATAGNCATCCTCCACTTAATACCAAGCTC
JMFF024O09+ GCTTCCAGCAGCCCTCCTCATATTTGAACCTATAGCCATCCTCCACTTAATACCAAGCTC
                      ____________________________________________________________
consensus GCTTCCAGCAGCCCTCCTCATATTTGAACCTATAGCCATCCTCCACTTAATACCAAGCTC
 
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rJMFF024O09- TGGTCCCCCTCAATTCTTCCAAGAACTCACTTGAATAGATTGTTAAATTTTGGAGCCTGG
JMFF024O09+ TGGTCCCCCTCAATTCTTCCAAGAACTCACTTGAATAGATTGTTAAATTTTGGAGCCTGG
                      ____________________________________________________________
consensus TGGTCCCCCTCAATTCTTCCAAGAACTCACTTGAATAGATTGTTAAATTTTGGAGCCTGG
 
. : . : . : . : . : . :
rJMFF024O09- AGACTTGGATTTATGGAATCTGGATTCTGGAGTATGAAG
JMFF024O09+ AGACTTGGATTTATGGAATCTGGATTCTGGAGTATGAAGAAACACCTAGATAGTTGGAAC
                      ____________________________________________________________
consensus AGACTTGGATTTATGGAATCTGGATTCTGGAGTATGAAGAAACACCTAGATAGTTGGAAC
 
. : . : . : . : . : . :
JMFF024O09+ TTGGAAGAAGGGAAGAACCAAGAATTTGAGAATCTGAGATGGGTGAGGGCGTGATTCGTG
                      ____________________________________________________________
consensus TTGGAAGAAGGGAAGAACCAAGAATTTGAGAATCTGAGATGGGTGAGGGCGTGATTCGTG
 
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JMFF024O09+ AGGCTGAGGCGCTGAGCGACGACCGGCGACTCGGCGCGAGGCAGTGAGCCAGTGAGGCCA
                      ____________________________________________________________
consensus AGGCTGAGGCGCTGAGCGACGACCGGCGACTCGGCGCGAGGCAGTGAGCCAGTGAGGCCA
 
. : . : . : . : . : . :
JMFF024O09+ GAATACGAGAGGGCTGGCGCCTGGCGGAGGGGCGGGCTGCGACTCCTCTCTCGCCGGAGA
                      ____________________________________________________________
consensus GAATACGAGAGGGCTGGCGCCTGGCGGAGGGGCGGGCTGCGACTCCTCTCTCGCCGGAGA
 
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JMFF024O09+ GGGCTGCGCGGCTGGCCAGATTTTAGGGACTACTGGACTAGGGTTCGATAAATCGCGATG
                      ____________________________________________________________
consensus GGGCTGCGCGGCTGGCCAGATTTTAGGGACTACTGGACTAGGGTTCGATAAATCGCGATG
 
. : . : . : . : . : . :
JMFF024O09+ GGATGAGAGATTGAGATGAGAGCCAGAAGACAATGAAAAATTTGTTAGATGAGAGGTTAC
                      ____________________________________________________________
consensus GGATGAGAGATTGAGATGAGAGCCAGAAGACAATGAAAAATTTGTTAGATGAGAGGTTAC