Contig 010230:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024N23Sequence412010230 (2)gb|KJB38279.1|6e-24hypothetical protein B456_006G246000 [Gossypium raimondii]705006587 (21)ref|XP_002517023.1|4e-92Auxin-responsive protein IAA7, putative [Ricinus communis] gb|EEF45186.1| Auxin-
JMFN031K09Sequence602010230 (2)ref|XP_007034956.1|1e-67Indole-3-acetic acid 7 isoform 1 [Theobroma cacao] gb|EOY05882.1| Indole-3-aceti

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN031K09+ GTCGGCACATATTCAGAGGTGTTGAGTAGATCCATCAGTTTCCTCT
                      ____________________________________________________________
consensus GTCGGCACATATTCAGAGGTGTTGAGTAGATCCATCAGTTTCCTCT
 
. : . : . : . : . : . :
JMFN031K09+ CATTCATGAAATCTATCATTCCCTGGGCCCCATAATTGCCAGTAGTGAAGGAACTGAACA
                      ____________________________________________________________
consensus CATTCATGAAATCTATCATTCCCTGGGCCCCATAATTGCCAGTAGTGAAGGAACTGAACA
 
. : . : . : . : . : . :
JMFN031K09+ TGTTGGCCAAAGCATCAGAGAGTTGATTGTAGGTGTTATACACCTTCAAGTCCACCTTGC
                      ____________________________________________________________
consensus TGTTGGCCAAAGCATCAGAGAGTTGATTGTAGGTGTTATACACCTTCAAGTCCACCTTGC
 
. : . : . : . : . : . :
JMFN031K09+ GCAGGTAAGGTGCACCATCCATGCTCACCTTCACAAAATTATTACCACTTTTCTGATCAC
                      ____________________________________________________________
consensus GCAGGTAAGGTGCACCATCCATGCTCACCTTCACAAAATTATTACCACTTTTCTGATCAC
 
. : . : . : . : . : . :
JMFN031K09+ CTTCTTCACCATTATTGCTCTTCTGATGATGGGCCATTACATTCTTTCTGTAACTCCTAA
JMFF024N23+ CCATTATTGCTCTTCTGATGATGGGCCATTACATTCTTTCTGTAACTCCTAA
                      ____________________________________________________________
consensus CTTCTTCACCATTATTGCTCTTCTGATGATGGGCCATTACATTCTTTCTGTAACTCCTAA
 
. : . : . : . : . : . :
JMFN031K09+ CTGGTGGCCAACCCACCACTTGTGCCTTGGCAGGGGGCTTGATGGGGTCCTTGTTAGGCT
JMFF024N23+ CTGGTGGCCAACCCACCACTTGTGCCTTGGCAGGGGGCTTGATGGGGTCCTTGTTAGGCT
                      ____________________________________________________________
consensus CTGGTGGCCAACCCACCACTTGTGCCTTGGCAGGGGGCTTGATGGGGTCCTTGTTAGGCT
 
. : . : . : . : . : . :
JMFN031K09+ CCGGAGGAGCTTGCATCTTAGTCTCCGAGAGATCCAAGCAAGAGCCGTCGGATTGAAGGT
JMFF024N23+ CCGGAGGAGCTTGCATCTTAGTCTCCGAGAGATCCAAGCAAGAGCCGTCGGATTGAAGGT
                      ____________________________________________________________
consensus CCGGAGGAGCTTGCATCTTAGTCTCCGAGAGATCCAAGCAAGAGCCGTCGGATTGAAGGT
 
. : . : . : . : . : . :
JMFN031K09+ TGAGTTTGAGATCAACGGTCTCAGAGAAGCCTCGTTTTCCGGTGGTCTTCATGGACTCAT
JMFF024N23+ TGAGTTTGAGATCAACGGTCTCAGAGAAGCCTCGTTTTCCGGTGGTCTTCATGGACTCAT
                      ____________________________________________________________
consensus TGAGTTTGAGATCAACGGTCTCAGAGAAGCCTCGTTTTCCGGTGGTCTTCATGGACTCAT
 
. : . : . : . : . : . :
JMFN031K09+ TTTCATTTCCACCGCCGCTGCCGCCGGGAAGGCCCAGGCAAAGTTCAGTCTCTTTGAGAT
JMFF024N23+ TTTCATTTCCACCGCCGCTGCCGCCGGGAAGGCCCAGGCAAAGTTCAGTCTCTTTGAGAT
                      ____________________________________________________________
consensus TTTCATTTCCACCGCCGCTGCCGCCGGGAAGGCCCAGGCAAAGTTCAGTCTCTTTGAGAT
 
. : . : . : . : . : . :
JMFN031K09+ TCAGGCCGCCGTGTCCGAGCATATTCGTCATTTTCACGGAAGTACAGCTTTCTCTTCGCG
JMFF024N23+ TCAGGCCGCCGTGTCCGAGCATATTCGTCATTTTCACGGAAGTACAGCTTTCTCTTCGCG
                      ____________________________________________________________
consensus TCAGGCCGCCGTGTCCGAGCATATTCGTCATTTTCACGGAAGTACAGCTTTCTCTTCGCG
 
. : . : . : . : . : . :
JMFN031K09+ CCTTAATTTACTTTCT
JMFF024N23+ CCTTAATTTACTTTCTTCTTCTTCTTCAATAATAATATTTCAATGTAGATGAGAGAGAAT
                      ____________________________________________________________
consensus CCTTAATTTACTTTCTTCTTCTTCTTCAATAATAATATTTCAATGTAGATGAGAGAGAAT