clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF022O07 | Sequence | 447 | 010223 (12) | ref|XP_006350839.1| | 6e-47 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1-like [Solanum tuberosum] | |||||
JMFF023I10 | Sequence | 424 | 010223 (12) | ref|XP_010104628.1| | 1e-46 | Peptidyl-prolyl cis-trans isomerase CYP19-4 [Morus notabilis] gb|EXC01434.1| Pep | 727 | 010223 (12) | gb|KJB34587.1| | 5e-108 | hypothetical protein B456_006G106600 [Gossypium raimondii] |
JMFF033E23 | Sequence | 554 | 010223 (12) | gb|KDP46494.1| | 4e-83 | hypothetical protein JCGZ_08466 [Jatropha curcas] | 769 | 010223 (12) | gb|KJB34587.1| | 4e-108 | hypothetical protein B456_006G106600 [Gossypium raimondii] |
JMFN020M23 | Sequence | 572 | 010223 (12) | gb|KJB34587.1| | 9e-89 | hypothetical protein B456_006G106600 [Gossypium raimondii] | |||||
JMFN035F16 | Sequence | 596 | 010223 (12) | gb|KJB34587.1| | 5e-100 | hypothetical protein B456_006G106600 [Gossypium raimondii] | |||||
JMSF018C03 | Sequence | 328 | 010223 (12) | ref|XP_010104628.1| | 1e-35 | Peptidyl-prolyl cis-trans isomerase CYP19-4 [Morus notabilis] gb|EXC01434.1| Pep | 764 | 010223 (12) | gb|KJB34587.1| | 4e-108 | hypothetical protein B456_006G106600 [Gossypium raimondii] |
JMSF024A03 | Sequence | 620 | 010223 (12) | gb|KJB34587.1| | 2e-96 | hypothetical protein B456_006G106600 [Gossypium raimondii] | 724 | 010223 (12) | gb|KJB34587.1| | 9e-108 | hypothetical protein B456_006G106600 [Gossypium raimondii] |
JMSF041F20 | Sequence | 839 | 003251 (120) | gb|ACN40426.1| | 2e-158 | unknown [Picea sitchensis] | 557 | 010223 (12) | gb|KJB34587.1| | 7e-97 | hypothetical protein B456_006G106600 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMSF024A03- GGTCTAATTGCAAATAACACTATGGTATGTG
rJMFF023I10- GGTCTAATTGCAAATAACACTATGGTATGTG
rJMFF033E23- CAAATGTATTTATCAGGTCTAATTGCAAATAACACTATGGTATGTG
____________________________________________________________
consensus CAAATGTATTTATCAGGTCTAATTGCAAATAACACTATGGTATGTG
. : . : . : . : . : . :
rJMSF024A03- GTGCATAGTTGGAAATCTAAGGCTCAGTCATTAGTAATTAAAGTTGTACTGAGAAACGCT
rJMFF023I10- GTGCATAGTTGGAAATCTAAGGCTCAGTCATTAGTAATTAAAGTTGTACTGAGAAACGCT
rJMSF041F20- CTGAGAAACGCT
rJMFF033E23- GTGCATAGTTGGAAATCTAAGGCTCAGTCATTAGTAATTAAAGTTGTACTGAGAAACGCT
rJMSF018C03- AATCTAAGGCTCAGTCATTAGTAATTAAAGTTGTACTGAGAAACGCT
____________________________________________________________
consensus GTGCATAGTTGGAAATCTAAGGCTCAGTCATTAGTAATTAAAGTTGTACTGAGAAACGCT
. : . : . : . : . : . :
rJMSF024A03- AACTGAGAAATGCTAGACAATAGATATCTGTAGATCTCTGCTAAGAAACCTCACAGAGGG
rJMFF023I10- AACTGAGAAATGCTAGACAATAGATATCTGTAGATCTCTGCTAAGAAACCTCACAGAGGG
rJMSF041F20- AACTGAGAAATGCTAGACAATAGATATCTGTAGATCTCTGCTAAGAAACCTCACAGAGGG
rJMFF033E23- AACTGAGAAATGCTAGACAATAGATATCTGTAGATCTCTGCTAAGAAACCTCACAGAGGG
rJMSF018C03- AACTGAGAAATGCTAGACAATAGATATCTGTAGATCTCTGCTAAGAAACCTCACAGAGGG
____________________________________________________________
consensus AACTGAGAAATGCTAGACAATAGATATCTGTAGATCTCTGCTAAGAAACCTCACAGAGGG
. : . : . : . : . : . :
rJMSF024A03- AGTTCACCACTGTCTGCAATTATAACTTTGCTCTTTGGTGTACCACTCTGCATTCCTTCT
rJMFF023I10- AGTTCACCACTGTCTGCAATTATAACTTTGCTCTTTGGTGTACCACTCTGCATTCCTTCT
JMFN035F16+ TTGGTGTACCACTCTGCATTCCTTCT
rJMSF041F20- AGTTCACCACTGTCTGCAATTATAACTTTGCTCTTTGGTGTACCACTCTGCATTCCTTCT
rJMFF033E23- AGTTCACCACTGTCTGCAATTATAACTTTGCTCTTTGGTGTACCACTCTGCATTCCTTCT
JMSF024A03+ GGTGTACCACTCTGCATTCCTTCT
rJMSF018C03- AGTTCACCACTGTCTGCAATTATAACTTTGCTCTTTGGTGTACCACTCTGCATTCCTTCT
____________________________________________________________
consensus AGTTCACCACTGTCTGCAATTATAACTTTGCTCTTTGGTGTACCACTCTGCATTCCTTCT
. : . : . : . : . : . :
rJMSF024A03- GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
rJMFF023I10- GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
JMFN035F16+ GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
rJMSF041F20- GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
rJMFF033E23- GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
JMSF024A03+ GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
JMFN020M23+ CCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
JMFF033E23+ TCCAAAAACAACATGTCGG
rJMSF018C03- GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
____________________________________________________________
consensus GCTTCAACCTTGTAGACCACATCCATCCCAGATAACACCTTTCCAAAAACAACATGTCGG
. : . : . : . : . : . :
rJMSF024A03- CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
rJMFF023I10- CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
JMFN035F16+ CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
rJMSF041F20- CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
rJMFF033E23- CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
JMSF024A03+ CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
JMFN020M23+ CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
JMFF033E23+ CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
rJMSF018C03- CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
____________________________________________________________
consensus CCATCCAACCAGCTAGTTGTGACGGTTGTGATGAAGAATTGTGAACCATTGGTGTCAGGA
. : . : . : . : . : . :
rJMSF024A03- CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
rJMFF023I10- CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTCTCATCA
JMFN035F16+ CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
rJMSF041F20- CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
rJMFF033E23- CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
JMSF024A03+ CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
JMFN020M23+ CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
JMFF033E23+ CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
rJMSF018C03- CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
JMFF023I10+ CATCA
JMFF022O07+ GTGTGCTTGAGCTNGAAATTGTCATCA
____________________________________________________________
consensus CCAGCATTTGCCATTGACAGAAGGCCTGGGCCGGTGTGCTTGAGCTTGAAATTTTCATCA
. : . : . : . : . : . :
rJMSF024A03- GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
rJMFF023I10- GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
JMFN035F16+ GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
rJMSF041F20- NCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
rJMFF033E23- GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
JMSF024A03+ GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
JMFN020M23+ GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
JMFF033E23+ GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
rJMSF018C03- GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
JMFF023I10+ GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
JMFF022O07+ GCAAACTTCTCCCCATTAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
____________________________________________________________
consensus GCAAACTTCTCCCCA-TAAATTGACTCCCCACCCCGGCCATCGCCAAGGGTAAAGTCACC
. : . : . : . : . : . :
rJMSF024A03- ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
rJMFF023I10- ACCTTGGATCATGAAGCTGGTAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMFN035F16+ ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
rJMSF041F20- ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
rJMFF033E23- ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMSF024A03+ ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMFN020M23+ ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMFF033E23+ ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMSF018C03+ TGTGGAATACGCTTCCTTTGTAATGTAGAGG
rJMSF018C03- ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMFF023I10+ ACCTTGGATCATGAAGCTGGTAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
JMFF022O07+ ACNTTGGATCATGAAGCTGGTAATAATTCNGTGGAATACGCTTCCTTTGTAATGTAGAGG
____________________________________________________________
consensus ACCTTGGATCATGAAGCTGGGAATAATTCTGTGGAATACGCTTCCTTTGTAATGTAGAGG
. : . : . : . : . : . :
rJMSF024A03- CTTGCCACTCTTTCCAATACCTTTCCCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
rJMFF023I10- CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMFN035F16+ CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
rJMSF041F20- CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
rJMFF033E23- CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMSF024A03+ CTTGCCACTCTTTCCAATACCTTTCCCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMFN020M23+ CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMFF033E23+ CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMSF018C03+ CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
rJMSF018C03- CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMFF023I10+ CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
JMFF022O07+ CTNGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTNTAAAGTTNTNNGCTGT
____________________________________________________________
consensus CTTGCCACTCTTTCCAATACCTTTCTCCCCTGTGCACAATGCTCTAAAGTTCTCTGCTGT
. : . : . : . : . : . :
rJMSF024A03- TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
rJMFF023I10- TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMFN035F16+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
rJMSF041F20- TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
rJMFF033E23- TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMSF024A03+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMFN020M23+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMFF033E23+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMSF018C03+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
rJMSF018C03- TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMFF023I10+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
JMFF022O07+ TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
____________________________________________________________
consensus TTTAGGAACTGCCTTTCCAAAGAGACCAATAACAATACGCCCAGCAGGTTTTCCATCAAC
. : . : . : . : . : . :
rJMSF024A03- CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
rJMFF023I10- CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMFN035F16+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
rJMSF041F20- CTCAAC
rJMFF033E23- CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMSF024A03+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMFN020M23+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMFF033E23+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMSF018C03+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
rJMSF018C03- CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMFF023I10+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
JMFF022O07+ CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTNTTAGACTTCTTTGCCTG
____________________________________________________________
consensus CTCAACATCAAAGAAAACTTTATGAGTTACTTCTTTCAAATTCTTAGACTTCTTTGCCTG
. : . : . : . : . : . :
rJMSF024A03- AGAAAGAGCCGCAAGAGTTCCGA
rJMFF023I10- AGAAAGAGCCGCAAGAGTTCCG
JMFN035F16+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAG
rJMFF033E23- AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
JMSF024A03+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
JMFN020M23+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
JMFF033E23+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
JMSF018C03+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
rJMSF018C03- AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
JMFF023I10+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
JMFF022O07+ AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
____________________________________________________________
consensus AGAAAGAGCCGCAAGAGTTCCGAAGAGGAAGACGAGCAGTACGACAGTTTGCAGCCTCGT
. : . : . : . : . : . :
rJMFF033E23- TTTC
JMSF024A03+ TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATG
JMFN020M23+ TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTA
JMFF033E23+ TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATGT
JMSF018C03+ TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATGT
rJMSF018C03- TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATGT
JMFF023I10+ TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATGT
JMFF022O07+ TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATGTGAGT
____________________________________________________________
consensus TTTCGCCATTTTCACTCCGCTAAGGTCTCCGAGTCTCAGCTAACTACTAGCTATGTGAGT