Contig 010220:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021M13Sequence126010220 (2)721002612 (2)ref|XP_009631136.1|5e-121PREDICTED: general transcription factor IIH subunit 4-like isoform X2 [Nicotian
JMFF029L12Sequence126010220 (2)703002612 (2)ref|XP_009631136.1|1e-95PREDICTED: general transcription factor IIH subunit 4-like isoform X2 [Nicotian

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF029L12+ TTGNAAA
JMFF021M13+ AA
                      ____________________________________________________________
consensus TTGNAAA
 
. : . : . : . : . : . :
JMFF029L12+ AAAAAAAAACCCCAACGTGGTTTTGGGTTCTATAAGGATTCTAGGGCTTTTCCAGCTCAA
JMFF021M13+ AAAAAAAAACCCCAACGTGGTTTTGGGTTCTATAAGGATTCTAGGGCTTTTCCAGCTCAA
                      ____________________________________________________________
consensus AAAAAAAAACCCCAACGTGGTTTTGGGTTCTATAAGGATTCTAGGGCTTTTCCAGCTCAA
 
. : . : . : . : . : . :
JMFF029L12+ GACTGAGAGAGCTGGACGACACTTCTCAGTTCTCACGTTGTTACTCCGTCTGTGGGC
JMFF021M13+ GACTGAGAGAGCTGGACGACACTTCTCAGTTCTCACGTTGTTACTCCGTCTGTGGGCCCA
                      ____________________________________________________________
consensus GACTGAGAGAGCTGGACGACACTTCTCAGTTCTCACGTTGTTACTCCGTCTGTGGGCCCA