Contig 010211:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018J22Sequence500010211 (5)ref|XP_009778931.1|6e-36PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Nicotiana sylvestris]629005532 (4)ref|XP_009778931.1|3e-23PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Nicotiana sylvestris]
JMFF046E23Sequence608010211 (5)ref|XP_011081365.1|2e-47PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 [Sesamum indicum]536005532 (4)
JMFS016A02Sequence570010211 (5)ref|XP_010325313.1|3e-49PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X2 [Solanum lycopers
JMFS070H01Sequence605010211 (5)ref|XP_010325313.1|1e-55PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X2 [Solanum lycopers
JMFS142D03Sequence625010211 (5)ref|XP_009622829.1|5e-66PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS070H01+ TAAGACCTTTTCACTTTTGTCTTTGGAATCAA
JMFS142D03+ TTGGAATCAA
                      ____________________________________________________________
consensus TAAGACCTTTTCACTTTTGTCTTTGGAATCAA
 
. : . : . : . : . : . :
JMFS070H01+ TTATATTGAGACATAGTGGGAAGACCTCCACACTTAACTGCTTATTATCACCAACAGAAA
JMFS142D03+ TTATATTGAGACATAGTGGGAAGACCTCCACACTTAACTGCTTATTATCACCAACAGAAA
                      ____________________________________________________________
consensus TTATATTGAGACATAGTGGGAAGACCTCCACACTTAACTGCTTATTATCACCAACAGAAA
 
. : . : . : . : . : . :
JMFS070H01+ TGACCTTTCTGGGTAAAGCTGGTCCT--------CCACTCAAAAAGCTTCTCCCATGCTT
JMFS142D03+ TGACCTTTCTGGGTAAAGCTGGTCCTCCTTTGTACCACTCAAAAAGCTTCTCCCATGCTT
JMFS016A02+ CCACTCAAAAAGCTTCTCCCATGCTT
JMFF046E23+ CCACTCAAAAAGCTTCTCCCATGCTT
                      ____________________________________________________________
consensus TGACCTTTCTGGGTAAAGCTGGTCCTCCTTTGTACCACTCAAAAAGCTTCTCCCATGCTT
 
. : . : . : . : . : . :
JMFS070H01+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
JMFS142D03+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCGCAAGCTGTGCATCAT
JMFS016A02+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
JMFF046E23+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
JMFF018J22+ TCTCACAAGCTGTGCATCAT
                      ____________________________________________________________
consensus CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
 
. : . : . : . : . : . :
JMFS070H01+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFS142D03+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFS016A02+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFF046E23+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFF018J22+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
                      ____________________________________________________________
consensus CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
 
. : . : . : . : . : . :
JMFS070H01+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFS142D03+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFS016A02+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFF046E23+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFF018J22+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
                      ____________________________________________________________
consensus CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
 
. : . : . : . : . : . :
JMFS070H01+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFS142D03+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFS016A02+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFF046E23+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFF018J22+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
                      ____________________________________________________________
consensus TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
 
. : . : . : . : . : . :
JMFS070H01+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFS142D03+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFS016A02+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFF046E23+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFF018J22+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
                      ____________________________________________________________
consensus TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
 
. : . : . : . : . : . :
JMFS070H01+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFS142D03+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFS016A02+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFF046E23+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFF018J22+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
                      ____________________________________________________________
consensus TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
 
. : . : . : . : . : . :
JMFS070H01+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFS142D03+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFS016A02+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFF046E23+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFF018J22+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
                      ____________________________________________________________
consensus TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
 
. : . : . : . : . : . :
JMFS070H01+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGA
JMFS142D03+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
JMFS016A02+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
JMFF046E23+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
JMFF018J22+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
                      ____________________________________________________________
consensus CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
 
. : . : . : . : . : . :
JMFS142D03+ AGAATTTCAATCTGA
JMFS016A02+ AGAATTTCAATCTGAGTCGATTTTGATCTACGGGAGAAATTATCAGA
JMFF046E23+ AGAATTTCAATCTGAGTCGATTTTGATCTACGGGAGAAATTATCAGACAACTCTTTCAA
JMFF018J22+ AGAATTTCAATCTGAGTCGATTTTGATNTACGGGAGAAATTATCAGACAACTCTTTCAAC
                      ____________________________________________________________
consensus AGAATTTCAATCTGAGTCGATTTTGATCTACGGGAGAAATTATCAGACAACTCTTTCAAC