| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011E07 | Sequence | 417 | 010207 (4) | ref|XP_009599381.1| | 171 | PREDICTED: uncharacterized protein LOC104095040 [Nicotiana tomentosiformis] | 718 | 014816 | ref|XP_011097233.1| | 7e-73 | PREDICTED: uncharacterized protein ycf36 [Sesamum indicum] |
| JMFF018G14 | Sequence | 498 | 010207 (4) | ref|XP_009599381.1| | 190 | PREDICTED: uncharacterized protein LOC104095040 [Nicotiana tomentosiformis] | 760 | 013685 (3) | ref|XP_011097233.1| | 3e-111 | PREDICTED: uncharacterized protein ycf36 [Sesamum indicum] |
| JMSF032J07 | Sequence | 657 | 010207 (4) | ref|XP_009599381.1| | 196 | PREDICTED: uncharacterized protein LOC104095040 [Nicotiana tomentosiformis] | 672 | 010207 (4) | ref|XP_009599381.1| | 273 | PREDICTED: uncharacterized protein LOC104095040 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF032J07- AGCATTCTTCTGAATGTTTGCGCATCAGTAATA
____________________________________________________________
consensus AGCATTCTTCTGAATGTTTGCGCATCAGTAATA
. : . : . : . : . : . :
rJMSF032J07- ATTCAAAACAAACAACGATAACCTTCGTTTCTACTTTATACTATTCCACGCCTTGATCAT
____________________________________________________________
consensus ATTCAAAACAAACAACGATAACCTTCGTTTCTACTTTATACTATTCCACGCCTTGATCAT
. : . : . : . : . : . :
rJMSF032J07- TTTAGAAGGTCCTCCCATTTGCAGTACTGTCCTCCGGCCAGTGCACGATAATACCTATCT
____________________________________________________________
consensus TTTAGAAGGTCCTCCCATTTGCAGTACTGTCCTCCGGCCAGTGCACGATAATACCTATCT
. : . : . : . : . : . :
rJMSF032J07- CTGCAGTAGACGGGCCTTCCATCGGCGGCCTCTGCAGCCGCCGCCGCCAGATCATCATCG
____________________________________________________________
consensus CTGCAGTAGACGGGCCTTCCATCGGCGGCCTCTGCAGCCGCCGCCGCCAGATCATCATCG
. : . : . : . : . : . :
rJMSF032J07- TCCTTCACCTCCATCGGCAATCTCAACAGGTCATTTTTCCTTATGTTGAATTTCGTGTTG
____________________________________________________________
consensus TCCTTCACCTCCATCGGCAATCTCAACAGGTCATTTTTCCTTATGTTGAATTTCGTGTTG
. : . : . : . : . : . :
rJMSF032J07- TTCCTTGAACTGGATCCATTGGATGAATACTCTTCTGTCGTAAATGTGTTGTGGATGAAA
____________________________________________________________
consensus TTCCTTGAACTGGATCCATTGGATGAATACTCTTCTGTCGTAAATGTGTTGTGGATGAAA
. : . : . : . : . : . :
rJMSF032J07- TCTTCTACTGGGGTAGCGAATATGAATAACGAGACTGCTGCTACCAGAAACGCCCCTGTT
____________________________________________________________
consensus TCTTCTACTGGGGTAGCGAATATGAATAACGAGACTGCTGCTACCAGAAACGCCCCTGTT
. : . : . : . : . : . :
rJMSF032J07- CCCACTAGGGTCTGTTTCAGCAACGCAATGACTGGTTTCACCTTGTACGACCCCAGAAGC
JMSF032J07+ GTTTCAGCAACGCAATGACTGGTTTCACCTTGTACGACCCCAGAAGC
____________________________________________________________
consensus CCCACTAGGGTCTGTTTCAGCAACGCAATGACTGGTTTCACCTTGTACGACCCCAGAAGC
. : . : . : . : . : . :
rJMSF032J07- CTATCGCGAGCCAAAATCTCAGGTGGCTTTACCCACATTTGACCATCATACCATCCAGTC
JMSF032J07+ CTATCGCGAGCCAAAATCTCAGGTGGCTTTACCCACATTTGACCATCATACCATCCAGTC
____________________________________________________________
consensus CTATCGCGAGCCAAAATCTCAGGTGGCTTTACCCACATTTGACCATCATACCATCCAGTC
. : . : . : . : . : . :
rJMSF032J07- TCTTCATAAGGTACAACAGCCGATAGAAGCCTATCCCCAACATAGCTCCATCCCAGATAA
JMSF032J07+ TCTTCATAAGGTACAACAGCCGATAGAAGCCTATCCCCAACATAGCTCCATCCCAGATAA
____________________________________________________________
consensus TCTTCATAAGGTACAACAGCCGATAGAAGCCTATCCCCAACATAGCTCCATCCCAGATAA
. : . : . : . : . : . :
rJMSF032J07- ATCCTCAGAACAATCAGTGCTACTAAAAGAGTTGTTCCTTGGAAGGATCAAAGCTAGCAG
JMSF032J07+ ATCCTCAGAACAATCAGTGCTACTAAAAGAGTTGTTCCTTGGAAGGATCAAAGCTAGCAG
JMFF018G14+ AAGGATCAAAGCTAGCAG
____________________________________________________________
consensus ATCCTCAGAACAATCAGTGCTACTAAAAGAGTTGTTCCTTGGAAGGATCAAAGCTAGCAG
. : . : . : . : . : . :
rJMSF032J07- CTGCAATGGGCACTCCTAAAACTGTGAAAGTAATGAACC
JMSF032J07+ CTGCAATGGGCACTCCTAAAACTGTGAAAGTAATGAACCAAAGGCCCCCAAGACGTAGGA
JMFF011E07+ AAAACTGTGAAAGTAATGAACCAAAGGCCCCCAAGACGTAGGA
JMFF018G14+ CTGCAATGGGCACTCCTAAAACTGTGAAAGTAATGAACCAAAGGCCCCCAAGACGTAGGA
____________________________________________________________
consensus CTGCAATGGGCACTCCTAAAACTGTGAAAGTAATGAACCAAAGGCCCCCAAGACGTAGGA
. : . : . : . : . : . :
JMSF032J07+ AGAATGAACCTGGATCCAACTCAGCCCAGGAATACATTGCTGATTCTTTGAGAGATGAGT
JMFF011E07+ AGAATGAACCTGGATCCAACTCAGCCCAGGAATACATTGCTGATTCTTTGAGAGATGAGT
JMFF018G14+ AGAATGAACCTGGATCCAACTCAGCCCAGGAATACATTGCTGATTCTTTGAGAGATGAGT
____________________________________________________________
consensus AGAATGAACCTGGATCCAACTCAGCCCAGGAATACATTGCTGATTCTTTGAGAGATGAGT
. : . : . : . : . : . :
JMSF032J07+ ATTCATTCACCGGCCTCTGTTCAAATGGCACTTCAAATTCCAACCCAGGGTCCCAACTCC
JMFF011E07+ ATTCATTCACCGGCCTCTGTTCAAATGGCACTTCAAATTCCAACCCAGGGTCCCAACTCC
JMFF018G14+ ATTCATTCACCGGCCTCTGTTCAAATGGCACTTCAAATTCCAACCCAGGGTCCCAACTCC
____________________________________________________________
consensus ATTCATTCACCGGCCTCTGTTCAAATGGCACTTCAAATTCCAACCCAGGGTCCCAACTCC
. : . : . : . : . : . :
JMSF032J07+ GACCTGGTAGCCCACCGGTTCCTCCGTTCATCTCATCTTTCAGGGCTTTTGCTGTGAACC
JMFF011E07+ GACCTGGTAGCCCACCGGTTCCTCCGTTCATCTCATCTTTCAGGGCTTTTGCTGTGAACC
JMFF018G14+ GACCTGGTAGCCCACCGGTTCCTCCGTTCATCTCATCTTTCAGGGCTTTTGCTGTGAACC
____________________________________________________________
consensus GACCTGGTAGCCCACCGGTTCCTCCGTTCATCTCATCTTTCAGGGCTTTTGCTGTGAACC
. : . : . : . : . : . :
JMSF032J07+ TCTTTGATAGGATCTGTGCTTTGTTAACATGAACTATCCATGAACTGCAACTTCCTCCAG
JMFF011E07+ TCTTTGATAGGATCTGTGCTTTGTTAACATGAACTATCCATGAACTGCAACTTCCTCCAG
JMFF018G14+ TCTTTGATAGGATCTGTGCTTTGTTAACATGAACTATCCATGAACTGCAACTTCCTCCAG
____________________________________________________________
consensus TCTTTGATAGGATCTGTGCTTTGTTAACATGAACTATCCATGAACTGCAACTTCCTCCAG
. : . : . : . : . : . :
JMSF032J07+ CATGGTTCACTTGTTGCCGGCCAGGAACTAGAGAGCAGGTAACATTTAACCTAAGCATTT
JMFF011E07+ CATGGTTCACTTGTTGCCGGCCAGGAACTAGAGAGCAGGTAACATTTAACCTAAGCATTT
JMFF018G14+ CATGGTTCACTTGTTGCCGGCCAGGAACTAGAGAGCAGGTAACATTTAACCTAAGCATTT
____________________________________________________________
consensus CATGGTTCACTTGTTGCCGGCCAGGAACTAGAGAGCAGGTAACATTTAACCTAAGCATTT
. : . : . : . : . : . :
JMSF032J07+ ACTTTTTGATTAAGAAGCTTAAGCATATACTTTGGAGGAAAGGCATCAAAGATTGTTCTT
JMFF011E07+ ACTTTTTGATTAAGAAGCTTAAGCATATACTTTGGAGGAAAGGCATCAAAGATTGTTCTT
JMFF018G14+ ACTTTTTGATTAAGAAGCTTAAGCATATACTTTGGAGGAAAGGCATCAAAGATTGTTCTT
____________________________________________________________
consensus ACTTTTTGATTAAGAAGCTTAAGCATATACTTTGGAGGAAAGGCATCAAAGATTGTTCTT
. : . : . : . : . : . :
JMSF032J07+ TTGCCCCAT
JMFF011E07+ TTGCCCCAT
JMFF018G14+ TTGCCCCATGGTGTAGTTTGTTGATTCTACAGGTGGTGCATTATTTATGTGATGCAAAAT
____________________________________________________________
consensus TTGCCCCATGGTGTAGTTTGTTGATTCTACAGGTGGTGCATTATTTATGTGATGCAAAAT