| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007H15 | Sequence | 546 | 010205 (10) | ref|XP_004291357.1| | 1e-91 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | 675 | 001631 (25) | gb|AFY06650.1| | 1e-110 | beta-tubulin, partial [Carica papaya] |
| JMFF018A24 | Sequence | 502 | 010205 (10) | ref|XP_004291357.1| | 1e-85 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | 702 | 001631 (25) | gb|AFY06650.1| | 3e-129 | beta-tubulin, partial [Carica papaya] |
| JMFF035C03 | Sequence | 496 | 010205 (10) | ref|XP_004291357.1| | 1e-83 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | 621 | 001631 (25) | gb|AFY06650.1| | 9e-108 | beta-tubulin, partial [Carica papaya] |
| JMFF048E08 | Sequence | 354 | 010205 (10) | gb|ABP65322.1| | 8e-55 | beta tubulin [Capsicum annuum] | 369 | 001631 (25) | gb|AFK39312.1| | 2e-33 | unknown [Medicago truncatula] |
| JMFF049L06 | Sequence | 624 | 010205 (10) | ref|XP_004291357.1| | 8e-128 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | 614 | 001631 (25) | gb|AFK39312.1| | 7e-35 | unknown [Medicago truncatula] |
| JMFS134G07 | Sequence | 615 | 010205 (10) | ref|XP_004291357.1| | 6e-116 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | |||||
| JMSF010H13 | Sequence | 409 | 010205 (10) | ref|XP_004291357.1| | 2e-68 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | 689 | 001631 (25) | gb|AFY06650.1| | 2e-119 | beta-tubulin, partial [Carica papaya] |
| JMSF021J15 | Sequence | 665 | 010205 (10) | ref|XP_004291357.1| | 1e-95 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | 776 | 001631 (25) | gb|AFY06650.1| | 2e-134 | beta-tubulin, partial [Carica papaya] |
| JMSF044D01 | Sequence | 503 | 010205 (10) | gb|ACY01827.1| | 7e-104 | beta tubulin [Hordeum vulgare subsp. vulgare] | 721 | 001631 (25) | gb|AFY06650.1| | 4e-129 | beta-tubulin, partial [Carica papaya] |
| JMSF049B20 | Sequence | 666 | 010205 (10) | ref|XP_004291357.1| | 1e-122 | PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF044D01+ TCAAGCAGCACGTAACTCCACTCATAGTTGCAGAGATCAAATGGTTGAGGTC
____________________________________________________________
consensus TCAAGCAGCACGTAACTCCACTCATAGTTGCAGAGATCAAATGGTTGAGGTC
. : . : . : . : . : . :
JMSF044D01+ GCCAAGGCTTGGAGTGCTGAGTTTCAAGGTCCTGAAACAAATATCATACAGTGCTTCGTT
____________________________________________________________
consensus GCCAAGGCTTGGAGTGCTGAGTTTCAAGGTCCTGAAACAAATATCATACAGTGCTTCGTT
. : . : . : . : . : . :
JMSF044D01+ GTCAAGGACCATGCATTCATCTGCATTCTCCACTAATTGATGAACAGAGAGTGTGGCATT
JMFF049L06+ CATGCATTCATCTGCATTCTCCACTAATTGATGAACAGAGAGTGTGGCATT
JMSF021J15+ CCACTAATTGATGAACAGAGAGTGTGGCATT
JMFS134G07+ GCATT
JMSF049B20+ CCACTAATTGATGAACAGAGAGTGTGGCATT
____________________________________________________________
consensus GTCAAGGACCATGCATTCATCTGCATTCTCCACTAATTGATGAACAGAGAGTGTGGCATT
. : . : . : . : . : . :
JMSF044D01+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
JMFF049L06+ ATATGGCTCTACAACTGTGTCCGAGACCTTGNGCGATGGGAAAACAGAGAATGTGAGCAT
JMSF021J15+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
JMFS134G07+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
JMSF049B20+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
____________________________________________________________
consensus ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
. : . : . : . : . : . :
JMSF044D01+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMFF049L06+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMSF021J15+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMFS134G07+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMFF007H15+ TTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMSF049B20+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
____________________________________________________________
consensus CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
. : . : . : . : . : . :
JMSF044D01+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFF049L06+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMSF021J15+ AGTACCG-CTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFS134G07+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFF007H15+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMSF049B20+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFF035C03+ AGTCACAATTCTCAGC
JMFF018A24+ GCAAACAGTCACAATTCTCAGC
____________________________________________________________
consensus AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
. : . : . : . : . : . :
JMSF044D01+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF049L06+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMSF021J15+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFS134G07+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF007H15+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMSF010H13+ TCGGTGTAATGACC
JMSF049B20+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF035C03+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF018A24+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
____________________________________________________________
consensus TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
. : . : . : . : . : . :
JMSF044D01+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF049L06+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMSF021J15+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFS134G07+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF007H15+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMSF010H13+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF048E08+ AAGTTATCGGGCCTGAAGAT
JMSF049B20+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF035C03+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF018A24+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
____________________________________________________________
consensus TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
. : . : . : . : . : . :
JMSF044D01+ CTGTCCAAACGGCCCCGATCTGATACTG
JMFF049L06+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMSF021J15+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFS134G07+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF007H15+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMSF010H13+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF048E08+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMSF049B20+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF035C03+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF018A24+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
____________________________________________________________
consensus CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
. : . : . : . : . : . :
JMFF049L06+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMSF021J15+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFS134G07+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF007H15+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMSF010H13+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF048E08+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMSF049B20+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF035C03+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF018A24+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
____________________________________________________________
consensus GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
. : . : . : . : . : . :
JMFF049L06+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMSF021J15+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFS134G07+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF007H15+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMSF010H13+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF048E08+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMSF049B20+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF035C03+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF018A24+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
____________________________________________________________
consensus GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
. : . : . : . : . : . :
JMFF049L06+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMSF021J15+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFS134G07+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF007H15+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMSF010H13+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF048E08+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMSF049B20+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF035C03+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF018A24+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
____________________________________________________________
consensus ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
. : . : . : . : . : . :
JMFF049L06+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCC
JMSF021J15+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFS134G07+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF007H15+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMSF010H13+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF048E08+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMSF049B20+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF035C03+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF018A24+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
____________________________________________________________
consensus CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
. : . : . : . : . : . :
JMSF021J15+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTC
JMFS134G07+ GTGAGGGAAA
JMFF007H15+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMSF010H13+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMFF048E08+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMSF049B20+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMFF035C03+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCTGTTTGAGAATGGAGAGAGGATGAGAT
JMFF018A24+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCTGTTTGAGAATGGAGAGAGGATGAGAT
____________________________________________________________
consensus GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCTGTTTGAGAATGGAGAGAGGATGAGAT