Contig 010195:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B06Sequence561010195 (6)ref|XP_006345083.1|1e-34PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos818004128 (5)ref|XP_009596648.1|9e-99PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Nicotiana tomentosif
JMFF045P02Sequence449010195 (6)525004128 (5)ref|XP_006345081.1|1e-08PREDICTED: serine protease SPPA, chloroplastic-like isoform X1 [Solanum tuberos
JMSF003L16Sequence345010195 (6)ref|XP_006345083.1|7e-12PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos
JMSF004I19Sequence320010195 (6)332004128 (5)ref|XP_009596646.1|8e-11PREDICTED: serine protease SPPA, chloroplastic isoform X1 [Nicotiana tomentosif
JMSF051I01Sequence673010195 (6)ref|XP_006345083.1|3e-55PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos726004128 (5)ref|XP_009596648.1|9e-113PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Nicotiana tomentosif
JMSF051K07Sequence700010195 (6)ref|XP_006345083.1|8e-69PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos758004128 (5)ref|XP_009596648.1|3e-94PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051I01+ CATGACAGTGGTTCAATGTGCAGGTAGACACCAGAAATCCGGGGA
JMSF051K07+ CACATGACAGTGGTTCAATGTGCAGGTAGACACCAGAAATCCGGGGA
                      ____________________________________________________________
consensus CACATGACAGTGGTTCAATGTGCAGGTAGACACCAGAAATCCGGGGA
 
. : . : . : . : . : . :
JMSF051I01+ TC--ATGCAGCCTTTATAAAGTTTTCACAAATTTGAGGCAAAGATAGTCCTGAAGAAAAA
JMSF051K07+ TCATATGCAGCCTTTATAAAGTTTTCACAAATTTGAGGCAAAGATAGTCCTGAAGAAAAA
                      ____________________________________________________________
consensus TCATATGCAGCCTTTATAAAGTTTTCACAAATTTGAGGCAAAGATAGTCCTGAAGAAAAA
 
. : . : . : . : . : . :
JMSF051I01+ CGGGTCTGTAACTGATCAGATACCTGGCCGCGCAATTTCATAGTCAAAACGCTGCCTTTC
JMSF051K07+ CGGGTCTGTAACTGATCAGATACCTGGCCGCGCAATTTCATAGTCAAAACGCTGCCTTTC
JMFF016B06+ TCATAGTCAAAACGCTGCCTTTC
                      ____________________________________________________________
consensus CGGGTCTGTAACTGATCAGATACCTGGCCGCGCAATTTCATAGTCAAAACGCTGCCTTTC
 
. : . : . : . : . : . :
JMSF051I01+ CGCACACGCTGCCACGGAAGCGCAAATAGCAATCTGAGCTTCACAACGAAACTCTTCCAA
JMSF051K07+ CGCACACGCTGCCACGGAAGCGCAAATAGCAATCTGAGCTTCACAACGAAACTCTTCCAA
JMFF016B06+ CGCACACGCTGCCACGGAAGCGCAAATAGCAATCTGAGCTTCACAACGAAACTCTTCCAA
                      ____________________________________________________________
consensus CGCACACGCTGCCACGGAAGCGCAAATAGCAATCTGAGCTTCACAACGAAACTCTTCCAA
 
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JMSF003L16+ TTCTCCAGTCGGGTACTGGTCCTCGCCGGAGGAGCCT
JMSF051I01+ GCGCCGTACTCTTCAAACACAAATTCTCCAGTCGGGTACTGGTCCTCGCCGGAGGAGCCT
JMFF045P02+ CTTCAAACACGTATTCTCCAGTCGGGTGCTGGTCCTCGCAGGAGGAGCCT
JMSF051K07+ GCGCCGTACTCTTCAAACACAAATTCTCCAGTCGGGTACTGGTCCTCGCCGGAGGAGCCT
JMFF016B06+ GCGCCGTACTCTTCAAACACAAATTCTCCAGTCGGGTACTGGTCCTCGCCGGAGGAGCCT
                      ____________________________________________________________
consensus GCGCCGTACTCTTCAAACACAAATTCTCCAGTCGGGTACTGGTCCTCGCCGGAGGAGCCT
 
. : . : . : . : . : . :
JMSF003L16+ CGAGCACTCCCGTCACCGTTAACCTCAGCAGTAGCATCATTCTTCATCTCCTCTTTGGCG
JMSF051I01+ CGAGCACTCCCGTCACCGTTAACCTCAGCAGTAGCATCATTCTTCATCTCCTCTTTGGCG
JMFF045P02+ GGAGCTCTCCTGTCAGCGTGAACCTCAGCAGTAGCATCATTCCTCATCTCGTAGGGGGCG
JMSF051K07+ CGAGCACTCCCGTCACCGTTAACCTCAGCAGTAGCATCATTCTTCATCTCCTCTTTGGCG
JMFF016B06+ CGAGCACTCCCGTCACCGTTAACCTCAGCAGTAGCATCATTCTTCATCTCCTCTTTGGCG
                      ____________________________________________________________
consensus CGAGCACTCCCGTCACCGTTAACCTCAGCAGTAGCATCATTCTTCATCTCCTCTTTGGCG
 
. : . : . : . : . : . :
JMSF003L16+ GAGGAAAATA-CACCGTCGTTTTTGGTGTCGATGGCGGAA-ACGGAGAAGCAGCGGCGGC
JMSF051I01+ GAGGAAAATA-CACCGTCGTTTTTGGTGTCGATGGCGGAA-ACGGAGAAGCAGCGGCGGC
JMFF045P02+ GAGGAAAATAGCACAGTCGCATTAGGTGTCGAAGGCGGCATACGGAGAAGCAGCGGCGGC
JMSF051K07+ GAGGAAAATA-CACCGTCGTTTTTGGTGTCGATGGCGGAA-ACGGAGAAGCAGCGGCGGC
JMSF004I19+ GGAA-ACGGAGAAGCAGCGGCGGC
JMFF016B06+ GAGGAAAATA-CACCGTCGTTTTTGGTGTCGATGGCGGAA-ACGGAGAAGCAGCGGCGGC
                      ____________________________________________________________
consensus GAGGAAAATA-CACCGTCGTTTTTGGTGTCGATGGCGGAA-ACGGAGAAGCAGCGGCGGC
 
. : . : . : . : . : . :
JMSF003L16+ TGTAGACAGGGGAAGGCTTGGGGAGTGGACTGTAAAGCGGAATCGGAGATAGGTGGACGG
JMSF051I01+ TGTAGACAGGGGAAGGCTTGGGGAGTGGACTGTAAAGCGGAATCGGAGATAGGTGGACGG
JMFF045P02+ AGTAGACAGGGGCAGGCTCGGGGAGTGGACTGTAAAGCGGAATCGATGATAGGTGGACGA
JMSF051K07+ TGTAGACAGGGGAAGGCTTGGGGAGTGGACTGTAAAGCGGAATCGGAGATAGGTGGACGG
JMSF004I19+ TGTAGACAGGGGAAGGCTTGGGGAGTGGACTGTAAAGCGGAATCGGAGATAGGTGGACGG
JMFF016B06+ TGTAGACAGGGGAAGGCTTGGGGAGTGGACTGTAAAGCGGAATCGGAGATAGGTGGACGG
                      ____________________________________________________________
consensus TGTAGACAGGGGAAGGCTTGGGGAGTGGACTGTAAAGCGGAATCGGAGATAGGTGGACGG
 
. : . : . : . : . : . :
JMSF003L16+ CGGAGGGGAGTCGGGAGAGAGAGAAGGTGAAGGAGCGGAGGTGGAGTGACGTCAGACGAG
JMSF051I01+ CGGAGGGGAGTCGGGAGAGAGAGAAGGTGAAGGAGCGGAGGTGGAGTGACGTCAGACGAG
JMFF045P02+ CGGAGGCGAGTCCGCAGAGAGAGAAGGAGACGGACCGGAGGCGGAGAGACGTCAGACGAG
JMSF051K07+ CGGAGGGGAGTCGGGAGAGAGAGAAGGTGAAGGAGCGGAGGTGGAGTGACGTCAGACGAG
JMSF004I19+ CGGAGGGGAGTCGGGAGAGAGAGAAGGTGAAGGAGCGGAGGTGGAGTGACGTCAGACGAG
JMFF016B06+ CGGAGGGGAGTCGGGAGAGAGAGAAGGTGAAGGAGCGGAGGTGGAGTGACGTCAGACGAG
                      ____________________________________________________________
consensus CGGAGGGGAGTCGGGAGAGAGAGAAGGTGAAGGAGCGGAGGTGGAGTGACGTCAGACGAG
 
. : . : . : . : . : . :
JMSF003L16+ AGGTGGGAAGAAAAAGCAGCTTCGACATCTTCTTATTCTTCTTCTTCTCCTCCTCTCTCG
JMSF051I01+ AGGTGGGAAGAAAAAGCAGCTTCGACATCTTCTTATTCTTCTTCTTCTCCTCCTCTCTCG
JMFF045P02+ AGGTGGGAAGAACAACCAGATTCGACATATTCCTAGTCTTATTGCTGTCCTCCTGTATCG
JMSF051K07+ AGGTGGGAAGAAAAAGCAGCTTCGACATCTTCTTATTCTTCTTCTTCTCCTCCTCTCTCG
JMSF004I19+ AGGTGGGAAGAAAAAGCAGCTTCGACATCTTCTTATTCTTCTTCTTCTCCTCCTCTCTCG
JMFF016B06+ AGGTGGGAAGAAAAAGCAGCTTCGACATCTTCTTATTCTTCTTCTTCTCCTCCTCTCTCG
                      ____________________________________________________________
consensus AGGTGGGAAGAAAAAGCAGCTTCGACATCTTCTTATTCTTCTTCTTCTCCTCCTCTCTCG
 
. : . : . : . : . : . :
JMSF003L16+ ATTGTGTTC
JMSF051I01+ ATTGTGTTCAAATGGAAGTGAAGAGTGGAATTAGGAGCTGATGAAACAAAGGCTCGCTGA
JMFF045P02+ AAGGTGTTCAAATGGAAGGGGAGAGTGGGATTAGGAGTTGATGAAGCAAAGGCTGGCTGA
JMSF051K07+ ATTGTGTTCAAATGGAAGTGAAGAGTGGAATTAGGAGCTGATGAAACAAAGGCTCGCTGA
JMSF004I19+ ATTGTGTTCAAATGGAAGTGAAGAGTGGAATTAGGAGCTGATGAAACAAAGGCTCGCTGA
JMFF016B06+ ATTGTGTTCAAATGGAAGTGAAGAGTGGAATTAGGAGCTGATGAAACAAAGGCTCGCTGA
                      ____________________________________________________________
consensus ATTGTGTTCAAATGGAAGTGAAGAGTGGAATTAGGAGCTGATGAAACAAAGGCTCGCTGA
 
. : . : . : . : . : . :
JMSF051I01+ GCACCACGTCGAGCTGATCAGCCACCAGTCC
JMFF045P02+ GCACCACGTCGAGCTGATCAGCCACCAGTCCACGGCTCA
JMSF051K07+ GCACCACGTCGAGCTGATCAGCCACCAGTCCACGGCTCATCCACATTACGCTC
JMSF004I19+ GCACCACGTCGAGCTGATCAGCCACCAGTCCACGGCTCATCCACATTACGCTC
JMFF016B06+ GCACCACGTCGAGCTGATCAGCCACCAGTCCACGGCTCATCCACATTACGCTCAGTAGAT
                      ____________________________________________________________
consensus GCACCACGTCGAGCTGATCAGCCACCAGTCCACGGCTCATCCACATTACGCTCAGTAGAT