Contig 010191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015F05Sequence469010191 (4)gb|EYU40420.1|2e-28hypothetical protein MIMGU_mgv1a017836mg, partial [Erythranthe guttata]
JMFF045N01Sequence638010191 (4)ref|XP_009610664.1|2e-47PREDICTED: eukaryotic translation initiation factor 4B [Nicotiana tomentosiform
JMFS045B07Sequence610010191 (4)ref|XP_009610664.1|2e-53PREDICTED: eukaryotic translation initiation factor 4B [Nicotiana tomentosiform
JMFS047E05Sequence611010191 (4)ref|XP_009610664.1|2e-53PREDICTED: eukaryotic translation initiation factor 4B [Nicotiana tomentosiform

Alignment

This contig is upended


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JMFS045B07+                            AGCCCAATTATCAGAATCGTCAGCCCTTGATTGCGAATCGGAG
JMFS047E05+                          GCAGCCCAATTATCAGAATCGTCAGCCCTTGACTGCGAATCGGAG
JMFF045N01+                            AGCCCAATTATCAGAATCGTCAGCCCTTGACTGCGAATCGGAG
                      ____________________________________________________________
consensus                            GCAGCCCAATTATCAGAATCGTCAGCCCTTGACTGCGAATCGGAG
 
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JMFS045B07+           -AAAAACCCTCCTCTCTCCCCCCTTTCCCTTCTCTCAAAACCGTTACCGGCTGTAAATTT
JMFS047E05+           -AAAAACCCTCCTCTCTCCCCCCTTTCCCTTCTCTCAAAACCGTTACCGGCTGTAAATTT
JMFF045N01+           AAAAAACCCTCCTCTCTCCCCCCTTTCCCTTCTCTCAAAACCGTTACCGGCTGTAAATTT
                      ____________________________________________________________
consensus             -AAAAACCCTCCTCTCTCCCCCCTTTCCCTTCTCTCAAAACCGTTACCGGCTGTAAATTT
 
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JMFS045B07+           CTTCGTTGCTCCCCAGTCATCAGTCTCGTCAGCGCGAGAAGGAGCGAAGTCCCGATTGGA
JMFS047E05+           CTTCGTTGCTCCCCAGTCATCAGTCTCGTCAGCGCGAGAAGGAGCGAAGTCCCGATTGGA
JMFF045N01+           CTTCGTGNCTCCCCAGTCATCAGTCTCGTCAGCGCGAGAAGGAGCGAAGTCCCGATTGGA
                      ____________________________________________________________
consensus             CTTCGTTGCTCCCCAGTCATCAGTCTCGTCAGCGCGAGAAGGAGCGAAGTCCCGATTGGA
 
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JMFS045B07+           GTCCCTCGGCCTACGCGACTCTTCCCTAGCAGGCCTGTCATACGAAGAACCGTAGGATCT
JMFS047E05+           GTCCCTCGGCCTACGCGACTCTTCCCTAGCAGGCCTGTCATACGAAGAACCGTAGGATCT
JMFF045N01+           GTCCCTCGGCCTACGCGACTCTTCCCTAGCAGGCCTGTCATACGAAGAACCGTAGGATCT
JMFF015F05+                      TACGCGACTCTTCCCTAGCAGGCCTGTCATACGAAGAACCGTAGGATCT
                      ____________________________________________________________
consensus             GTCCCTCGGCCTACGCGACTCTTCCCTAGCAGGCCTGTCATACGAAGAACCGTAGGATCT
 
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JMFS045B07+           AAAACCGCCGCCAAGCCTGGACCGGTCAAGCTCCTCAGCAGTTCGTTCGCGAGGGCCGGT
JMFS047E05+           AAAACCGCCGCCAAGCCTGGACCGGTCAAGCTCCTCAGCAGTTCGTTCGCGAGGGCCGGT
JMFF045N01+           AAAACCGCCGCCAAGCCTGGACCGGTCAAGCTCCTCAGCAGTTCGTTCGCGAGGGCCGGT
JMFF015F05+           AAAACCGCCGCCAAGCCTGGACCGGTCAAGCTCCTCAGCAGTTCGTTCGCGAGGGCCGGT
                      ____________________________________________________________
consensus             AAAACCGCCGCCAAGCCTGGACCGGTCAAGCTCCTCAGCAGTTCGTTCGCGAGGGCCGGT
 
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JMFS045B07+           GGGGAGCGCCATGATCTCCTCGGGAGTAAGCCCAACGGATTGAGGCTGCTTAGCCGATCC
JMFS047E05+           GGGGAGCGCCATGATCTCCTCGGGAGTAAGCCCAACGGATTGAGGCTGCTTAGCCGATCC
JMFF045N01+           GGGGAGCGCCATGATCTCCTCGGGAGTAAGCCCAACGGATTGAGGCTGCTTAGCCGATCC
JMFF015F05+           GGGGAGCGCCATGATCTCCTCGGGAGTAAGCCCAACGGATTGAGGCTGCTTAGCCGATCC
                      ____________________________________________________________
consensus             GGGGAGCGCCATGATCTCCTCGGGAGTAAGCCCAACGGATTGAGGCTGCTTAGCCGATCC
 
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JMFS045B07+           ATAACTGGAGAACTCCTGTAAAGACAAGATCTGAGGCTTCTTCTTCTTAGTCTTGGTGGC
JMFS047E05+           ATAACTGGAGAACTCCTGTAAAGACAAGATCTGAGGCTTCTTCTTCTTAGTCTTGGTGGC
JMFF045N01+           ATAACTGGAGAACTCCTGTAAAGACAAGATCTGAGGCTTCTTCTTCTTAGTCTTGGTGGC
JMFF015F05+           ATAACTGGAGAACTCCTGTAAAGACAAGATCTGAGGCTTCTTCTTCTTAGTCTTGGTGGC
                      ____________________________________________________________
consensus             ATAACTGGAGAACTCCTGTAAAGACAAGATCTGAGGCTTCTTCTTCTTAGTCTTGGTGGC
 
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JMFS045B07+           GGCGGCGGCAGCCAGGGAAGGGAAGTCGGAAAGCCCCGCATCGTTGGCGGCTTTGTTGTT
JMFS047E05+           GGCGGCGGCAGCCAGGGAAGGGAAGTCGGAAAGCCCCGCATCGTTGGCGGCTTTGTTGTT
JMFF045N01+           GGCGGCGGCAGCCAGGGAAGGGAAGTCGGAAAGCCCCGCATCGTTGGCGGCTTTGTTGTT
JMFF015F05+           GGCGGCGGCAGCCAGGGAAGGGAAGTCGGAAAGCCCCGCATCGTTGGCGGCTTTGTTGTT
                      ____________________________________________________________
consensus             GGCGGCGGCAGCCAGGGAAGGGAAGTCGGAAAGCCCCGCATCGTTGGCGGCTTTGTTGTT
 
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JMFS045B07+           GAGTCCCCCGGCATTAGCGGCATCTTCCTTTCCCTGCTGCAGAAGCTCGTCTTCGTTCTC
JMFS047E05+           GAGTCCCCCGGCATTAGCGGCATCTTCCTTTCCCTGCTGCAGAAGCTCGTCTTCGTTCTC
JMFF045N01+           GAGTCCCCCGGCATTAGCGGCATCTTCCTTTCCCTGCTGCAGAAGCTCGTCTTCGTTCTC
JMFF015F05+           GAGTCCCCCGGCATTAGCGGCATCTTCCTTTCCCTGCTGCAGAAGCTCGTCTTCGTTCTC
                      ____________________________________________________________
consensus             GAGTCCCCCGGCATTAGCGGCATCTTCCTTTCCCTGCTGCAGAAGCTCGTCTTCGTTCTC
 
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JMFS045B07+           CTCGGAATCCAAAGCCCAGGCGCCAGG-TTTTGCCCAAGCGCTCACAGTTGCCGCCATGT
JMFS047E05+           CTCGGAATCCAAAGCCCAGGCGCCAGG-TTTTGCCCAAGCGCTCACAGTTGCCGCCATGT
JMFF045N01+           CTCGGAATCCAAAGCCCAGGCGCCAGG-TTTTGCCCAAGCGCTCACAGTTGCCGCCATGT
JMFF015F05+           CTCGGAATCCAAAGCCCAGGCGCCAGGTTTTTGCCCAAGCGCTCACAGTTGCCGCCATGT
                      ____________________________________________________________
consensus             CTCGGAATCCAAAGCCCAGGCGCCAGG-TTTTGCCCAAGCGCTCACAGTTGCCGCCATGT
 
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JMFS045B07+           CTGTGTTCCTCTTCTCTCTCTCTCTCCC                                
JMFS047E05+           CTGTGTTCCTCTTCTCTCTCTCTCTCCC                                
JMFF045N01+           CTGTGTTCCTCTTCTCTCTCTCTCTCCCTCTCTCTTTCTCTTTCCGTAGGTTTTGT    
JMFF015F05+           CTGTGTTCCTCTTCTCTCTCTCTCTCCCTCTCTCTTTCTCTTTCCGTAGGTTTTGTGATT
                      ____________________________________________________________
consensus             CTGTGTTCCTCTTCTCTCTCTCTCTCCCTCTCTCTTTCTCTTTCCGTAGGTTTTGTGATT