Contig 010190:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C01Sequence607010190 (4)ref|XP_009803691.1|3e-65PREDICTED: germin-like protein subfamily 3 member 2 [Nicotiana sylvestris]651010190 (4)ref|XP_006361472.1|9e-93PREDICTED: germin-like protein subfamily 3 member 2-like [Solanum tuberosum]
JMFF032G12Sequence477010190 (4)ref|XP_009803691.1|3e-72PREDICTED: germin-like protein subfamily 3 member 2 [Nicotiana sylvestris]746010190 (4)ref|XP_009803691.1|6e-117PREDICTED: germin-like protein subfamily 3 member 2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF015C01- CTCTT
                      ____________________________________________________________
consensus CTCTT
 
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rJMFF015C01- AAGTAGTGATTACGAGTTTTCCTTGTCACACAAAACAAGAAAGATAGAATTTGCAGACTT
rJMFF032G12- ATTTGCAGACTT
                      ____________________________________________________________
consensus AAGTAGTGATTACGAGTTTTCCTTGTCACACAAAACAAGAAAGATAGAATTTGCAGACTT
 
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rJMFF015C01- ATGACAGTAGTCTAAAGAAATATTTCTAACATTCAACTACTAAATCAAGAAACAGTGAAG
rJMFF032G12- ATGACAGTAGTCTAAAGAAATATTTCTAACATTCAACTACTAAATCAAGAAACAGTGAAG
                      ____________________________________________________________
consensus ATGACAGTAGTCTAAAGAAATATTTCTAACATTCAACTACTAAATCAAGAAACAGTGAAG
 
. : . : . : . : . : . :
rJMFF015C01- AGATTGGGACAACAATTTGTCATAATCTAAGTACACAGCAAACTACTGAGGAACAAACCT
rJMFF032G12- AGATTGGGACAACAATTTGTCATAATCTAAGTACACAGCAAACTACTGAGGAACAAACCT
                      ____________________________________________________________
consensus AGATTGGGACAACAATTTGTCATAATCTAAGTACACAGCAAACTACTGAGGAACAAACCT
 
. : . : . : . : . : . :
rJMFF015C01- CTTTCTCAGTTTATCAGCTTCCTTATCACTCAGCCCAAAAGCCTTCATCAGCAACTCTTC
rJMFF032G12- CTTT-TCAGTTTATCAGCTTCCTTATCACTCAGCCCAAAAGCCTTCATCAGCAACTCTTC
                      ____________________________________________________________
consensus CTTTCTCAGTTTATCAGCTTCCTTATCACTCAGCCCAAAAGCCTTCATCAGCAACTCTTC
 
. : . : . : . : . : . :
rJMFF015C01- TTTTATGGAACTTCCAAACACAGCATTAGGGATTTTCACTAACCCTGGATTCTGGCTGTT
rJMFF032G12- TTTTATGGAACTTCCAAACACAGCATTAGGGATTTTCACTAACCCTGGATTCTGGCTGTT
                      ____________________________________________________________
consensus TTTTATGGAACTTCCAAACACAGCATTAGGGATTTTCACTAACCCTGGATTCTGGCTGTT
 
. : . : . : . : . : . :
rJMFF015C01- GAAACTCCCCAGTATACTAGCAGGGGAATCACCAACATTCATCTGAAAATGAACCAGTCC
rJMFF032G12- GAAACTCCCCAGTATACTAGCAGGGGAATCACCAACATTCATCTGAAAATGAACCAGTCC
                      ____________________________________________________________
consensus GAAACTCCCCAGTATACTAGCAGGGGAATCACCAACATTCATCTGAAAATGAACCAGTCC
 
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rJMFF015C01- CCTCGGGAACACCATCACCTCCCCCTTCTCCACAACTCTCGCGAAAACTCTGTTTGATGA
rJMFF032G12- CCTCGGGAACACCATCACCTCCCCCTTCTCCACAACTCTCGCGAAAACTCTGTTTGATGA
JMFF032G12+ TTCTCCACAACTCTCGCGAAAACTCTGTTTGATGA
JMFF015C01+ TTGATGA
                      ____________________________________________________________
consensus CCTCGGGAACACCATCACCTCCCCCTTCTCCACAACTCTCGCGAAAACTCTGTTTGATGA
 
. : . : . : . : . : . :
rJMFF015C01- ATCAACAAACCCCGAATAGACCTTCCCCTCCAGCACAAACGCGGTCTCAGTGGCCCTGGG
rJMFF032G12- ATCAACAAACCCCGAATAGACCTTCCCCTCCAGCACAAACGCGGTCTCAGTGGCCCTGGG
JMFF032G12+ ATCAACAAACCCCGAATAGACCTTCCCCTCCAGCACAAACGCGGTCTCAGTGGCCCTGGG
JMFF015C01+ ATCAACAAACCCCGAATAGACCTTCCCCTCCAGCACAAACGCGGTCTCAGTGGCCCTGGG
                      ____________________________________________________________
consensus ATCAACAAACCCCGAATAGACCTTCCCCTCCAGCACAAACGCGGTCTCAGTGGCCCTGGG
 
. : . : . : . : . : . :
rJMFF015C01- ATGGTAATGTGGCACGTTAATCCCACCAGCATCAAAATCAGCACGAACAAACGACATGCC
rJMFF032G12- ATGGTAATGTGGCACGTTAATCCCACCAGCATCAAAATCAGCACGAACAAACGACATGCC
JMFF032G12+ ATGGTAATGTGGCACGTTAATCCCACCAGCATCAAAATCAGCACGAACAAACGACATGCC
JMFF015C01+ ATGGTAATGTGGCACGTTAATCCCACCAGCATCAAAATCAGCACGAACAAACGACATGCC
                      ____________________________________________________________
consensus ATGGTAATGTGGCACGTTAATCCCACCAGCATCAAAATCAGCACGAACAAACGACATGCC
 
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rJMFF015C01- TAGTGTGTGCAGGCCTGGGAAGACAGCTGAGCTCACCGGGATGGATGCAAACCCGGTTTT
rJMFF032G12- TAGTGTGTGCAGGCCTGGGAAGACAGCTGAGCTCACCGGGATGGATGCAAACCCGGTTTT
JMFF032G12+ TAGTGTGTGCAGGCCTGGGAAGACAGCTGAGCTCACCGGGATGGATGCAAACCCGGTTTT
JMFF015C01+ TAGTGTGTGCAGGCCTGGGAAGACAGCTGAGCTCACCGGGATGGATGCAAACCCGGTTTT
                      ____________________________________________________________
consensus TAGTGTGTGCAGGCCTGGGAAGACAGCTGAGCTCACCGGGATGGATGCAAACCCGGTTTT
 
. : . : . : . : . : . :
rJMFF015C01- CTTGAAATCCCCGGGGTTTTTAACGCCTGAATAGACNAAATCTTCA
rJMFF032G12- CTTGAAATCCCCGGGGTTTTTAACGCCTGAATAGACAAAATCTTCAACTGTGACTAGGGA
JMFF032G12+ CTTGAAATCCCCGGGGTTTTTAACGCCTGAATAGACAAAATCTTCAACTGTGACTAGGGA
JMFF015C01+ CTTGAAATCCCCGGGGTTTTTAACGCCTGAATAGACAAAATCTTCAACTGTGACTAGGGA
                      ____________________________________________________________
consensus CTTGAAATCCCCGGGGTTTTTAACGCCTGAATAGACAAAATCTTCAACTGTGACTAGGGA
 
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rJMFF032G12- TGAGTTCTTGCAAGATGGGAAGATTGATGAAAATTCGGGTATTGGTATGCAGTAGTCATG
JMFF032G12+ TGAGTTCTTGCAAGATGGGAAGATTGATGAAAATTCGGGTATTGGTATGCAGTAGTCATG
JMFF015C01+ TGAGTTCTTGCAAGATGGGAAGATTGATGAAAATTCGGGTATTGGTATGCAGTAGTCATG
                      ____________________________________________________________
consensus TGAGTTCTTGCAAGATGGGAAGATTGATGAAAATTCGGGTATTGGTATGCAGTAGTCATG
 
. : . : . : . : . : . :
rJMFF032G12- GACTGGATCAGGATCAGATGCCAAGGCTATGCAGCTCTGAAGGAGAAGAACTAAAAAAAC
JMFF032G12+ GACTGGATCAGGATCAGATGCCAAGGCTATGCAGCTCTGAAGGAGAAGAACTAAAAAAAC
JMFF015C01+ GACTGGATCAGGATCAGATGCCAAGGCTATGCAGCTCTGAAGGAGAAGAACTAAAAAAAC
                      ____________________________________________________________
consensus GACTGGATCAGGATCAGATGCCAAGGCTATGCAGCTCTGAAGGAGAAGAACTAAAAAAAC
 
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rJMFF032G12- TGTCATCTTAGTACT
JMFF032G12+ TGTCATCTTAGTACTGAACATGGTTGGTACTATGTTCTTGTCTCAATATTCAAGAATGGC
JMFF015C01+ TGTCATCTTAGTACTGAACATGGTTGGTACTATGTTCTTGTCTCAATATTCAAGAATGGC
                      ____________________________________________________________
consensus TGTCATCTTAGTACTGAACATGGTTGGTACTATGTTCTTGTCTCAATATTCAAGAATGGC
 
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JMFF032G12+ TAAAGATGGGTGATATGATTCT
JMFF015C01+ TAAAGATGGGTGATATGATTCTAAGGAATCAAGGGCGGGGCATTTAAACAAATAATTAGC
                      ____________________________________________________________
consensus TAAAGATGGGTGATATGATTCTAAGGAATCAAGGGCGGGGCATTTAAACAAATAATTAGC
 
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JMFF015C01+ ACTCCACCCCCCAACTAACTTCTGCTTGGAATTTAATCTTCTTGAGCCTAAAGTCATGAG
                      ____________________________________________________________
consensus ACTCCACCCCCCAACTAACTTCTGCTTGGAATTTAATCTTCTTGAGCCTAAAGTCATGAG
 
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JMFF015C01+ AGTGATTCTTCATGCACCAACTGGCAACTGCTGCTGTAGCTGTTGAGGAATATATATATT
                      ____________________________________________________________
consensus AGTGATTCTTCATGCACCAACTGGCAACTGCTGCTGTAGCTGTTGAGGAATATATATATT