Contig 010184:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P19Sequence495010184 (4)ref|XP_008378453.1|3e-14PREDICTED: synaptotagmin-5 [Malus domestica]745001250 (6)ref|XP_008383203.1|7e-111PREDICTED: ALA-interacting subunit 3-like [Malus domestica]
JMFF019B22Sequence529010184 (4)ref|XP_007211498.1|2e-32hypothetical protein PRUPE_ppa007864mg [Prunus persica] gb|EMJ12697.1| hypotheti686001250 (6)ref|XP_008383203.1|2e-94PREDICTED: ALA-interacting subunit 3-like [Malus domestica]
JMFF020B14Sequence629010184 (4)ref|XP_010260740.1|1e-50PREDICTED: ALA-interacting subunit 3 [Nelumbo nucifera]444001250 (6)ref|XP_008383203.1|6e-83PREDICTED: ALA-interacting subunit 3-like [Malus domestica]
JMFF051E16Sequence616010184 (4)ref|XP_010260740.1|7e-44PREDICTED: ALA-interacting subunit 3 [Nelumbo nucifera]525001250 (6)ref|XP_009340121.1|3e-59PREDICTED: ALA-interacting subunit 3-like [Pyrus x bretschneideri]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF020B14+ TTGGTAATAC
                      ____________________________________________________________
consensus TTGGTAATAC
 
. : . : . : . : . : . :
JMFF051E16+ ATAAATAGGCTGCTTCATATGCTTCGGTACTCTCAGGATTCGAGGGCAGATTTTACTT
JMFF020B14+ ACATAAATAGGCTGCTTCATATGCTTCGGTACTCTCAGGATTCGAGGGCAGATTTTACTT
                      ____________________________________________________________
consensus ACATAAATAGGCTGCTTCATATGCTTCGGTACTCTCAGGATTCGAGGGCAGATTTTACTT
 
. : . : . : . : . : . :
JMFF051E16+ AGATTGCTTNGTATAAACTGAACTTCATTTCCTGAATAATTGCTGGTNATGCAGTCAGCC
JMFF019B22+ TCCTGAATAATTGCTTGGTATGCAGTCAGCC
JMFF020B14+ AGATTGCTTTGTATAAACTGAACTTCATTTCCTGAATAATTGCTTGGTATGCAGTCAGCC
                      ____________________________________________________________
consensus AGATTGCTTTGTATAAACTGAACTTCATTTCCTGAATAATTGCTTGGTATGCAGTCAGCC
 
. : . : . : . : . : . :
JMFF051E16+ TCATAACGATCAACAATCTCAACAAGATCCCGAGAAGCAAGCAAGGAAACAACTCCAATG
JMFF019B22+ TCATAACGATCAACAATCTCAACAAGATCCCGAGAAGCAAGCAAGGAAACAACTCCAATG
JMFF020B14+ TCATAACGATCAACAATCTCAACAACATCCCGAGAAGCAAGCAAGGAAACAACTCCAATG
                      ____________________________________________________________
consensus TCATAACGATCAACAATCTCAACAAGATCCCGAGAAGCAAGCAAGGAAACAACTCCAATG
 
. : . : . : . : . : . :
JMFF051E16+ GGAATGAAGACAATACTGACTAGCAGAAAAGCTGAGATAACCCACTTTGGTGTTAATATT
JMFF019B22+ GGAATGAAGACAATACTGACTAGCAGAAAAGCTGAGATAACCCACTTTGGTGTTAATATT
JMFF020B14+ GGAATGAAGACAATACTGACTAGCAGAAAAGCTGAGATAACCCACTTTGGTGTTAATATT
JMFF012P19+ TTTGGTGTTAATATT
                      ____________________________________________________________
consensus GGAATGAAGACAATACTGACTAGCAGAAAAGCTGAGATAACCCACTTTGGTGTTAATATT
 
. : . : . : . : . : . :
JMFF051E16+ GGTTTGCAGGCAGGAAGTTCCTGTTGCGTAAACCTTGAATACTTGGGTCGCCTGGAAATT
JMFF019B22+ GGTTTGCAGGCAGGAAGTTCCTGTTGCGTAAACCTTGAATACTTGGGTCGCCTGGAAATT
JMFF020B14+ GGTTTGCAGGCAGGAAGTTCCTGTTGCGTAAACCTTGAATACTTGGGTCGCCTGGAAATT
JMFF012P19+ GGTTTGCAGGCAGGAAGTTCCTGTTGCGTAAACCTTGAATACTTGGGTCGCCTGGAAATT
                      ____________________________________________________________
consensus GGTTTGCAGGCAGGAAGTTCCTGTTGCGTAAACCTTGAATACTTGGGTCGCCTGGAAATT
 
. : . : . : . : . : . :
JMFF051E16+ CTTCTGGTTGCAGAATTATCGGCGGATCCGGGGGCGCCGGAGCTGGATGAGGGAGCGTTG
JMFF019B22+ CTTCTGGTTGCAGAATTATCGGCGGATCCGGGGGCGCCGGAGCTGGATGAGGGAGCGTTG
JMFF020B14+ CTTCTGGTTGCAGAATTATCGGCGGATCCGGGGGCGCCGGAGCTGGATGAGGGAGCGTTG
JMFF012P19+ CTTCTGGTTGCAGAATTATCGGCGGATCCGGGGGCGCCGGAGCTGGATGAGGGAGCGTTG
                      ____________________________________________________________
consensus CTTCTGGTTGCAGAATTATCGGCGGATCCGGGGGCGCCGGAGCTGGATGAGGGAGCGTTG
 
. : . : . : . : . : . :
JMFF051E16+ GAGCTCATCACTCGAATTTCTTCGTCTCAGAAATCTAAACTGCAAATATCAGGTAGATGT
JMFF019B22+ GAGCTCATCACTCGAATTTCTTCGTCTCAGAAATCTAAACTGCAAATATCAGGTAGATGT
JMFF020B14+ GAGCTCATCACTCGAATTTCTTCGTCTCAGAAATCTAAACTGCAAATATCAGGTAGATGT
JMFF012P19+ GAGCTCATCACTCGAATTTCTTCGTCTCAGAAATCTAAACTGCAAATATCAGGTAGATGT
                      ____________________________________________________________
consensus GAGCTCATCACTCGAATTTCTTCGTCTCAGAAATCTAAACTGCAAATATCAGGTAGATGT
 
. : . : . : . : . : . :
JMFF051E16+ TTTTTTGGTTCGATCAAATTGTGGAAGAATTAG
JMFF019B22+ TTTTTTGGTTCGATCAAATTGTGGAAGAATTAG
JMFF020B14+ TTTTTTGGTTCGATCAAATTGTGGAAGAATTAG
JMFF012P19+ TTTTTTGGTTCGATCAAATTGTGGAAGAATTAGTTTTACATCAACCGCTTTGGCCCTCCG
                      ____________________________________________________________
consensus TTTTTTGGTTCGATCAAATTGTGGAAGAATTAGTTTTACATCAACCGCTTTGGCCCTCCG
 
. : . : . : . : . : . :
JMFF012P19+ CTTGCTGCTCCGATATCTCATCATATGTCGCCAGCCCGCCATCAAAGCAATTCCAAACAG
                      ____________________________________________________________
consensus CTTGCTGCTCCGATATCTCATCATATGTCGCCAGCCCGCCATCAAAGCAATTCCAAACAG
 
. : . : . : . : . : . :
JMFF012P19+ AATCCCCATCAGCATCCCCGAAATCAGCCCCATCTTCGATGATCCAGCAAAAAATTTCCT
                      ____________________________________________________________
consensus AATCCCCATCAGCATCCCCGAAATCAGCCCCATCTTCGATGATCCAGCAAAAAATTTCCT
 
. : . : . : . : . : . :
JMFF012P19+ TATTCCTGCTCCGAAAAAAAGAATTCCTGCAACTGCCTTCAACTGACCCAGTAGCTCCTT
                      ____________________________________________________________
consensus TATTCCTGCTCCGAAAAAAAGAATTCCTGCAACTGCCTTCAACTGACCCAGTAGCTCCTT
 
. : . : . : . : . : . :
JMFF012P19+ TCTCTCACACCAGGAAGATATAGCTTTCTCTCTCTGTAATTATAGATTGGGTTGCTTAGC
                      ____________________________________________________________
consensus TCTCTCACACCAGGAAGATATAGCTTTCTCTCTCTGTAATTATAGATTGGGTTGCTTAGC