Contig 010170:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009G24Sequence580010170 (2)ref|XP_009775110.1|5e-37PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like isoform X2 [Nicot721002892 (2)ref|XP_009610649.1|5e-93PREDICTED: uroporphyrinogen decarboxylase, chloroplastic [Nicotiana tomentosifo
JMSF028O11Sequence626010170 (2)ref|XP_009775109.1|7e-70PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like isoform X1 [Nicot725002892 (2)ref|XP_009610649.1|3e-105PREDICTED: uroporphyrinogen decarboxylase, chloroplastic [Nicotiana tomentosifo

Alignment

This contig is upended


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JMSF028O11+ CCCCAACATATGGAACTGACTCTTCAGGGTTGAATTCTCT
                      ____________________________________________________________
consensus CCCCAACATATGGAACTGACTCTTCAGGGTTGAATTCTCT
 
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JMSF028O11+ AACTTTCTCAACATCTGCAGCAGTTTGCATAGGATCAAATATGACGGGACCTTTCCCCTT
JMFF009G24+ TGCAGCAGTTTGCATAGGATCAAATATGACGGGACCTTTCCCCTT
                      ____________________________________________________________
consensus AACTTTCTCAACATCTGCAGCAGTTTGCATAGGATCAAATATGACGGGACCTTTCCCCTT
 
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JMSF028O11+ AATGATGTCAAAGGGTATGTTCATTCCGGAGAGAGGGGTAAGAATGTCTGAAAATAAAAT
JMFF009G24+ AATGATGTCAAAGGGTATGTTCATTCCGGAGAGAGGGGTAAGAATGTCTGAAAATAAAAT
                      ____________________________________________________________
consensus AATGATGTCAAAGGGTATGTTCATTCCGGAGAGAGGGGTAAGAATGTCTGAAAATAAAAT
 
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JMSF028O11+ AACCCCGTCTGGACGAAATACTTTCCATGGCTGTAGAGAAATTTCCACCACAAGGTCCAC
JMFF009G24+ AACCCCGTCTGGACGAAATACTTTCCATGGCTGTAGAGAAATTTCCACCACAAGGTCCAC
                      ____________________________________________________________
consensus AACCCCGTCTGGACGAAATACTTTCCATGGCTGTAGAGAAATTTCCACCACAAGGTCCAC
 
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JMSF028O11+ ATTTTCTGATCTCTCACGAAAAGAAGGATACTTCTCACAAATAATTTGATAACTCTGCCT
JMFF009G24+ ATTTTCTGATCTCTCACG-AAAGAAGGATACTTCTCACAAATAATTTGATAACT----CT
                      ____________________________________________________________
consensus ATTTTCTGATCTCTCACGAAAAGAAGGATACTTCTCACAAATAATTTGATAACTCTGCCT
 
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JMSF028O11+ TCATGTACCTCCCTGCTTGTCTCATAAGCCAAACGGGAGGCCTTTCCACTTCTTTCCCAC
JMFF009G24+ TCATGTACCTCCCTGCTTGTCTCATAAGCCAAACGGGAGGCCTTTCCACTTCTTTCCCAC
                      ____________________________________________________________
consensus TCATGTACCTCCCTGCTTGTCTCATAAGCCAAACGGGAGGCCTTTCCACTTCTTTCCCAC
 
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JMSF028O11+ GAACAGCATCGAGCAAAAGAGGTTCAGTAGCATTAATAGCTTTTGGTTCCGCAACAGTCC
JMFF009G24+ GAACAGCATCGAGCAAAAGAGGTTCAGTAGCATTAATAGCTTTTGGTTCCGCAACAGTCC
                      ____________________________________________________________
consensus GAACAGCATCGAGCAAAAGAGGTTCAGTAGCATTAATAGCTTTTGGTTCCGCAACAGTCC
 
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JMSF028O11+ CTCCAACGGAGCAATAGATTCTTGGTTTGAAGTTAGAGCGAGAAGGAGAAGAATTGAGGG
JMFF009G24+ CTCCAACGGAGCAATAGATTCTTGGTTTGAAGTTAGAGCGAGAAGGAGAAGAATTGAGGG
                      ____________________________________________________________
consensus CTCCAACGGAGCAATAGATTCTTGGTTTGAAGTTAGAGCGAGAAGGAGAAGAATTGAGGG
 
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JMSF028O11+ TGGCCTTAGCGGAAACAGAGATTGCCGAGAAAGATGGAGCTGAGATGTGAATGCAAGACA
JMFF009G24+ TGGCCTTAGCGGAAACAGAGATTGCCGAGAAAGATGGAGCTGAGATGTGAATGCAAGACA
                      ____________________________________________________________
consensus TGGCCTTAGCGGAAACAGAGATTGCCGAGAAAGATGGAGCTGAGATGTGAATGCAAGACA
 
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JMSF028O11+ TTTTTTTGTGGCATGAAATTCTTTAGCAAACTGCAAGGGAGTTTTGTCTGGGCATGAAAT
JMFF009G24+ TTTTTTTGTGGCATGAAATTCTTTAGCAAACTGCAAGGGAGTTTTGTCTGGGCATGAAAT
                      ____________________________________________________________
consensus TTTTTTTGTGGCATGAAATTCTTTAGCAAACTGCAAGGGAGTTTTGTCTGGGCATGAAAT
 
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JMSF028O11+ TTCTTAGCATCTCAAGACATTAAAAAAAATTCAGGAACCTT
JMFF009G24+ TTCTTAGCATCTCAAGACATTAAAAAAAATTCAGGAACCTTCGACAAGAAAGGGGATTTT
                      ____________________________________________________________
consensus TTCTTAGCATCTCAAGACATTAAAAAAAATTCAGGAACCTTCGACAAGAAAGGGGATTTT