| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006H23 | Sequence | 581 | 010154 (4) | ref|XP_010262126.1| | 2e-78 | PREDICTED: transmembrane 9 superfamily member 4-like [Nelumbo nucifera] | 817 | 007137 (5) | ref|XP_006392684.1| | 2e-98 | hypothetical protein EUTSA_v100123151mg, partial [Eutrema salsugineum] gb|ESQ299 |
| JMSF005P13 | Sequence | 251 | 010154 (4) | ref|XP_004297557.1| | 82.8 | PREDICTED: transmembrane 9 superfamily member 7 [Fragaria vesca subsp. vesca] | |||||
| JMSF045O01 | Sequence | 713 | 010154 (4) | ref|XP_009762751.1| | 1e-120 | PREDICTED: transmembrane 9 superfamily member 4-like isoform X1 [Nicotiana sylv | 772 | 007137 (5) | dbj|BAF00815.1| | 3e-95 | putative multispanning membrane protein [Arabidopsis thaliana] |
| JMSF051G20 | Sequence | 666 | 010154 (4) | ref|XP_009762751.1| | 6e-101 | PREDICTED: transmembrane 9 superfamily member 4-like isoform X1 [Nicotiana sylv | 694 | 007137 (5) | dbj|BAF00815.1| | 1e-90 | putative multispanning membrane protein [Arabidopsis thaliana] |
This contig is upended
. : . : . : . : . : . :
JMSF045O01+ TCTTCTCATTCCACTCCTTGTACTCGTGA
____________________________________________________________
consensus TCTTCTCATTCCACTCCTTGTACTCGTGA
. : . : . : . : . : . :
JMSF045O01+ TTAATGCTGGTTGGTGTAACTTCAAATCCCACTATTCGAGCGGTGTCAGTTTCAGTATCC
JMSF051G20+ CAGTATCC
____________________________________________________________
consensus TTAATGCTGGTTGGTGTAACTTCAAATCCCACTATTCGAGCGGTGTCAGTTTCAGTATCC
. : . : . : . : . : . :
JMSF045O01+ TTGTGATACATGACTCTAAAGCTTAAGTGGTTATTGATGAAATATTTCTCCTCTTTACTC
JMSF051G20+ TTGTGATACATGACTCTAAAGCTTAAGTGGTTATTGATGAAATATTTCTCCTCTTTACTC
____________________________________________________________
consensus TTGTGATACATGACTCTAAAGCTTAAGTGGTTATTGATGAAATATTTCTCCTCTTTACTC
. : . : . : . : . : . :
JMSF045O01+ CCTGCATAGTTCCCCTTGAACCCAACACGAAAACCATGTTCGTGTATGGTTGACTGAGTT
JMSF051G20+ CCTGCATAGTTCCCCTTGAACCCAACACGAAAACCATGTTCGTGTATGGTTGACTGAGTT
JMFF006H23+ ACCCAACACGAAAACCATGTTCGTGTATGGTTGACTGAGTT
____________________________________________________________
consensus CCTGCATAGTTCCCCTTGAACCCAACACGAAAACCATGTTCGTGTATGGTTGACTGAGTT
. : . : . : . : . : . :
JMSF045O01+ CCATCCCGCTTTTGTCTAATTACAGCAACTGGAAGGTTATCCAAAATCATGTTAACCCTA
JMSF051G20+ CCATCCCGCTTTTGTCTAATTACAGCAACTGGAAGGTTATCCAAAATCATGTTAACCCTA
JMFF006H23+ CCATCCCGCTTTTGTCTAATTACAGCAACTGGAAGGTTATCCAAAATCATGTTAACCCTA
____________________________________________________________
consensus CCATCCCGCTTTTGTCTAATTACAGCAACTGGAAGGTTATCCAAAATCATGTTAACCCTA
. : . : . : . : . : . :
JMSF045O01+ TATTCATCATCAATTTTTTCTTTGAAGTTCTTTGCAGCTTCAGCATCAAGTTTTACTAGA
JMSF051G20+ TATTCATCATCAATTTTTTCTTTGAAGTTCTTTGCAGCTTCAGCATCAAGTTTTACTAGA
JMFF006H23+ TATTCATCATCAATTTTTTCTTTGAAGTTCTTTGCAGCTTCAGCATCAAGTTTTACTAGA
____________________________________________________________
consensus TATTCATCATCAATTTTTTCTTTGAAGTTCTTTGCAGCTTCAGCATCAAGTTTTACTAGA
. : . : . : . : . : . :
JMSF045O01+ CAAGCCACCTTGCAAGGCAACTCTTGCCTCATATTGAAAGTATAAACTGAGTTCTCTATC
JMSF051G20+ CAAGCCACCTTGCAAGGCAACTCTTGCCTCATATTGAAAGTATAAACTGAGTTCTCTATC
JMFF006H23+ CAAGCCACCTTGCAAGGCAACTCTTGCCTCATATTGAAAGTATAAACTGAGTTCTCTATC
____________________________________________________________
consensus CAAGCCACCTTGCAAGGCAACTCTTGCCTCATATTGAAAGTATAAACTGAGTTCTCTATC
. : . : . : . : . : . :
JMSF045O01+ CGATCACCTCGAAGAACCTCCCCCAAATTTTCCGCATTATTCATAATTTTGGTAGGCTTG
JMSF051G20+ CGATCACCTCGAAGAACCTCCCCCAAATTTTCTGCATTATTCATAATTTTGGTAGGCTTG
JMFF006H23+ CGATCACCTCGAAGAACCTCCCCCAAATTTTCTGCATTATTCATAATTTTGGTAGGCTTG
____________________________________________________________
consensus CGATCACCTCGAAGAACCTCCCCCAAATTTTCTGCATTATTCATAATTTTGGTAGGCTTG
. : . : . : . : . : . :
JMSF045O01+ CAATACTTCAGGAAATAATAGTCATACGGAAGCTGAGTCTTTGTGGAAGAAAGCTTGTTC
JMSF005P13+ ATAATAGTCATACGGAAGCTGAGTCTTTGTGGAAGAAAGCTTGTTC
JMSF051G20+ CAATACTTCAGGAAATAATAGTCATACGGAAGCTGAGTCTTTGTGGAAGAAAGCTTGTTC
JMFF006H23+ CAATACTTCAGGAAATAATAGTCATACGGAAGCTGAGTCTTTGTGGAAGAAAGCTTGTTC
____________________________________________________________
consensus CAATACTTCAGGAAATAATAGTCATACGGAAGCTGAGTCTTTGTGGAAGAAAGCTTGTTC
. : . : . : . : . : . :
JMSF045O01+ ACTTTAACAGCTAGTGGATTACCAGTTTGAAAATCTCGAGGAGCAACGCCGGGGAGGTAG
JMSF005P13+ ACTTTAACAGCTAGTGGATTACCAGTTTGAAAATCTCGAGGAGCAACGCCGGGGAGGTAG
JMSF051G20+ ACTTTAACAGCTAGTGGATTACCAGTTTGAAAATCTCGAGGAGCAACGCCGGGGAGGTAG
JMFF006H23+ ACTTTAACAGCTAGTGGATTACCAGTTTGAAAATCTCGAGGAGCAACGCCGGGGAGGTAG
____________________________________________________________
consensus ACTTTAACAGCTAGTGGATTACCAGTTTGAAAATCTCGAGGAGCAACGCCGGGGAGGTAG
. : . : . : . : . : . :
JMSF045O01+ AAGGATTGCGCAGACGATACGAGGAAGAACAGAAGCGAGACGATGGATATCGTGTTCACC
JMSF005P13+ AAGGATTGCGCAGACGATACGAGGAAGAACAGAAGCGAGACGATGGATATCGTGTTCACC
JMSF051G20+ AAGGATTGCGCAGACGATACGAGGAAGAACAGAAGCGAGACGATGGATATCGTGTTCACC
JMFF006H23+ AAGGATTGCGCAGACGATACGAGGAAGAACAGAAGCGAGACGATGGATATCGTGTTCACC
____________________________________________________________
consensus AAGGATTGCGCAGACGATACGAGGAAGAACAGAAGCGAGACGATGGATATCGTGTTCACC
. : . : . : . : . : . :
JMSF045O01+ CGACCCGACATCCTTCTGCCCGTTTCGAACCGATCCATTTCAGCACAATCAGAGCTAACA
JMSF005P13+ CGACCCGACATCCTTCTGCCCGTTTCGAACCGATCCATTTCAGCACAATCAGAGCTAACA
JMSF051G20+ CGACCCGACATCCTTCTGCCCGTTTCGAACCGATCCATTTCAGCACAATCAGAGCTAACA
JMFF006H23+ CGACCCGACATCCTTCTGCCCGTTTCGAACCGATCCATTTCAGCACAATCAGAGCTAACA
____________________________________________________________
consensus CGACCCGACATCCTTCTGCCCGTTTCGAACCGATCCATTTCAGCACAATCAGAGCTAACA
. : . : . : . : . : . :
JMSF045O01+ AGCGGAGAAGCACGGAAACAGT
JMSF005P13+ AGCGGAGAAGCACGGAAACAGT
JMSF051G20+ AGCGGAGAAGCACGGAAACAGTAGGAAGACCAGTGGAAACTGGAAAGGGGGTTTTAT
JMFF006H23+ AGCGGAGAAGCACGGAAACAGTAGGAAGACCAGTGGAAACTGGAAAGGGGGTTTTATGGC
____________________________________________________________
consensus AGCGGAGAAGCACGGAAACAGTAGGAAGACCAGTGGAAACTGGAAAGGGGGTTTTATGGC