Contig 010146:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005F17-                                      TAATGTATTTTGTTTTAATTCTTTTTGTAGAA
                      ____________________________________________________________
consensus                                         TAATGTATTTTGTTTTAATTCTTTTTGTAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+                                                             TTTTTTTTCT
rJMFF005F17-          CTCATGAATTGCGGTCATAGTTTATTATGTGTAAGAAATATTCTGGAAATTTTTTTTTCT
                      ____________________________________________________________
consensus             CTCATGAATTGCGGTCATAGTTTATTATGTGTAAGAAATATTCTGGAAATTTTTTTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TCTCGCACATATATACAATTTTTTCCGAAAAACTAAATTGGATATATACGCATTTTTTTT
rJMFF005F17-          TCTCGCACATATATACAATTTTTTCCGAAAAACTAAATTCGATATATACACA-TTTTTTT
                      ____________________________________________________________
consensus             TCTCGCACATATATACAATTTTTTCCGAAAAACTAAATTGGATATATACGCATTTTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TGGAAAAACAAAAATTGAAATAGATAGATCAGAATTAACATTCTGGCTTTTTTTGGCTTT
rJMFF005F17-          TGGAAAAACAAAAATTGAAATAGATAGATCAGAATTAACATTCTGGCTTTTTTTGGCTTT
                      ____________________________________________________________
consensus             TGGAAAAACAAAAATTGAAATAGATAGATCAGAATTAACATTCTGGCTTTTTTTGGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           GACGCATAGAAATCAAAACCAAAATACATGGAAGAATGAACAAAAACAGAAAAATAATTT
rJMFF005F17-          GACGCATAGAAATCAAAACCAAAATACATGGAAGAATGAACAAAAACAGAAAAGTTTTTT
JMFF005F17+                                      ATGGAAGAATGAACAAAAACAGAAAAGTTTTTT
                      ____________________________________________________________
consensus             GACGCATAGAAATCAAAACCAAAATACATGGAAGAATGAACAAAAACAGAAAAGTTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TCGTATATATACTCCTGTATTCGAACATTAATGATTCAAATGTATATATGTACATTTTTT
rJMFF005F17-          TCGTATATATACTCCTGTATTCGAACATTAATGATTCGAATGTATATATGTACA-TTTTT
JMFF005F17+           TCGTATATATACTCCTGTATTCGAACATTAATGATTCGAATGTATATATGTACA-TTTTT
                      ____________________________________________________________
consensus             TCGTATATATACTCCTGTATTCGAACATTAATGATTCGAATGTATATATGTACA-TTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TTTCAAAAAGGAAAAATAAATAATCATCACTACCTTC-TTTTTTGCCGATCTGCCATTTT
rJMFF005F17-          TTTCAAAAAGGAAAAATAAATAATCATCACTACCTTCTTTTTTTGCCGATCTGCCA-TTT
JMFF005F17+           TTTCAAAAAGGAAAAATAAATAATCATCACTACCTTCTTTTTTTGCCGATCTGCCA-TTT
                      ____________________________________________________________
consensus             TTTCAAAAAGGAAAAATAAATAATCATCACTACCTTCTTTTTTTGCCGATCTGCCA-TTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TTTCCTCTCCGATCTGCGTCCTGCCGACGGTAGTTCTGTGCGATCGGCGTTCTGGCAGAA
rJMFF005F17-          TTTCCTCTCCGATCTGCGTCCTGCCAACGGTAGTTCTGTGCGATCGGCGTTCCGGCANAA
JMFF005F17+           TTTCCTCTCCGATCTGCGTCCTGCCAACGGTAGTTCTGTGCGATCGGCGTTCCGGCAGAA
                      ____________________________________________________________
consensus             TTTCCTCTCCGATCTGCGTCCTGCCAACGGTAGTTCTGTGCGATCGGCGTTCCGGCAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           GGCGGAGGCGCGGCGCTCCAGCAGAGGGCCGCGGCGGCATGTTGGGCCTT-GGGCGGTGG
rJMFF005F17-          GGCGGAGGCGCGGCGCTCCAGCANAGGGCCGCGGCGGCATGTTGTGCCTTGGGGTGGTGG
JMFF005F17+           GGCGGAGGCGCGGCGCTCCAGCAGAGGGCCGCGGCGGCATGTTGTGCCTT-GGGTGGTGG
                      ____________________________________________________________
consensus             GGCGGAGGCGCGGCGCTCCAGCAGAGGGCCGCGGCGGCATGTTGTGCCTT-GGGTGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TGTTCCTCCGTCGGATCCGGCCGTTCTGAAACTGACAAACAGACTATTCGCGTTGGGGTC
rJMFF005F17-          TGTTCCTCCGTCGGATCCGGCCGTTCTGAAACTGACAAACAGACTATTCGCGTTGGGGTC
JMFF005F17+           TGTTCCTCCGTCGGATCCGGCCGTTCTGAAACTGACAAACAGACTATTCGCGTTGGGGTC
                      ____________________________________________________________
consensus             TGTTCCTCCGTCGGATCCGGCCGTTCTGAAACTGACAAACAGACTATTCGCGTTGGGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053H10+           TCACTTCCCCCTCGGCGATTCAGC                                    
rJMFF005F17-          TCACTTCCCCCTCGGCGATTCAGCGAATGGGGACTGGCAAACAACCTTAGGCGTTGCAAT
JMFF005F17+           TCACTTCCCCCTCGGCGATTCAGCGAATGGGGACTGGCAAACAACCTTAGGCGTTGCAAT
                      ____________________________________________________________
consensus             TCACTTCCCCCTCGGCGATTCAGCGAATGGGGACTGGCAAACAACCTTAGGCGTTGCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005F17-          TTCTGCCTTCGATGATCCAATCTGATCGTCAGGTAAATCGCGATCATGGACGGTTGATGT
JMFF005F17+           TTCTGCCTTCGATGATCCAATCTGATCGTCAGGTAAATCGCGATCATGGACGGTTGATGT
                      ____________________________________________________________
consensus             TTCTGCCTTCGATGATCCAATCTGATCGTCAGGTAAATCGCGATCATGGACGGTTGATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005F17-          ATGTTGATCGCGATTTGGCTCCTTCGTCGC                              
JMFF005F17+           ATGTTGATCGCGATTTGGCTCCTTCGTCGCAACCAACGGTAATGGTTTTTTTTTGTTGAC
                      ____________________________________________________________
consensus             ATGTTGATCGCGATTTGGCTCCTTCGTCGCAACCAACGGTAATGGTTTTTTTTTGTTGAC