| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002H08 | Sequence | 560 | 010132 (5) | ref|XP_009784151.1| | 8e-16 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana sylvestris] | 748 | 003932 (6) | ref|XP_009626129.1| | 4e-104 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana tomentosiformis] |
| JMSF002P18 | Sequence | 235 | 010132 (5) | 713 | 003932 (6) | ref|XP_009626129.1| | 8e-99 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana tomentosiformis] | |||
| JMSF003P18 | Sequence | 222 | 010132 (5) | 483 | 003932 (6) | ref|XP_009626129.1| | 2e-39 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana tomentosiformis] | |||
| JMSF010J14 | Sequence | 448 | 010132 (5) | ref|XP_009784151.1| | 6e-04 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana sylvestris] | 740 | 003932 (6) | ref|XP_009626129.1| | 5e-103 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana tomentosiformis] |
| JMSF010K14 | Sequence | 444 | 010132 (5) | ref|XP_009784151.1| | 6e-04 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana sylvestris] | 767 | 003932 (6) | ref|XP_009626129.1| | 3e-107 | PREDICTED: ferrochelatase-2, chloroplastic [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF010K14+ CAGTGTG
JMSF010J14+ TTTGCAGTGTG
____________________________________________________________
consensus TTTGCAGTGTG
. : . : . : . : . : . :
JMSF010K14+ CAGTGTAGAGACAATCCTCCAAATACATGGCTTTTGTTTGCAGCTGACTTGGAACAAATG
JMSF010J14+ CAGTGTAGAGACAATCCTCCAAATACATGGCTTTTGTTTGCAGCTGACTTGGAACAAATG
____________________________________________________________
consensus CAGTGTAGAGACAATCCTCCAAATACATGGCTTTTGTTTGCAGCTGACTTGGAACAAATG
. : . : . : . : . : . :
JMSF010K14+ CTTACAGATGCCTCATGAGAACTACAATTCATTTGGCTTTCTCCATATGAGAGGTTTAAG
JMSF010J14+ CTTACAGATGCCTCATGAGAACTACAATTCATTTGGCTTTCTCCATATGAGAGGTTTAAG
____________________________________________________________
consensus CTTACAGATGCCTCATGAGAACTACAATTCATTTGGCTTTCTCCATATGAGAGGTTTAAG
. : . : . : . : . : . :
JMSF010K14+ GTAGGAGTCAATCTAGTCTGAGGGCAAGAGAAGGAAGAAGACGAAACGTTGGTTCTGAAA
JMSF010J14+ GTAGGAGTCAATCTAGTCTGAGGGCAAGAGAAGGAAGAAGACGAAACGTTGGTTCTGAAA
JMFF002H08+ AAGGAAGAAGACGAAACGTTGGTTCTGAAA
____________________________________________________________
consensus GTAGGAGTCAATCTAGTCTGAGGGCAAGAGAAGGAAGAAGACGAAACGTTGGTTCTGAAA
. : . : . : . : . : . :
JMSF010K14+ CTGCGGAGATTCATCCTGGAAACGACGGTAGAGCTCGCGACTGCGTCCATTTTACGATCT
JMSF010J14+ CTGCGGAGATTCATCCTGGAAACGACGGTAGAGCTCGCGACTGCGTCCATTTTACGATCT
JMSF002P18+ CT
JMFF002H08+ CTGCGGAGATTCATCCTGGAAACGACGGTAGAGCTCGCGACTGCGTCCATTTTACGATCT
____________________________________________________________
consensus CTGCGGAGATTCATCCTGGAAACGACGGTAGAGCTCGCGACTGCGTCCATTTTACGATCT
. : . : . : . : . : . :
JMSF010K14+ TCTACACACACACAGCGATCGAATGCAGTCTCTTATACGCAGAGAAAAAAGAAGATGAAA
JMSF010J14+ TCTACACACACACAGCGATCGAATGCAGTCTCTTATACGCAGAGAAAAAAGAAGATGAAA
JMSF002P18+ TCTACACACACACAGCGATCGAATGCAGTCTCTTATACGCAGAGAAAAAAGAAGATGAAA
JMSF003P18+ ACAGCGATCGAATGCAGTCTCTTATACGCAGAGAAAAAAGAAGATGAAA
JMFF002H08+ TCTACACACACACAGCGATCGAATGCAGTCTCTTATACGCAGAGAAAAAAGAAGATGAAA
____________________________________________________________
consensus TCTACACACACACAGCGATCGAATGCAGTCTCTTATACGCAGAGAAAAAAGAAGATGAAA
. : . : . : . : . : . :
JMSF010K14+ AAAATGAGTATTGAATACAATAGGGTTTAGAGTTTTAGGTGAAGTTGGTGAGTCAAAGAA
JMSF010J14+ AAAATGAGTATTGAATACAATAGGGTTTAGAGTTTTAGGTGAAGTTGGTGAGTCAAAGAA
JMSF002P18+ AAAATGAGTATTGAATACAATAGGGTTTAGAGTTTTAGGTGAAGTTGGTGAGTCAAAGAA
JMSF003P18+ AAAATGAGTATTGAATACAATAGGGTTTAGAGTTTTAGGTGAAGTTGGTGAGTCAANGAA
JMFF002H08+ AAAATGAGTATTGAATACAATAGGGTTTAGAGTTTTAGGTGAAGTTGGTGAGTCAAAGAA
____________________________________________________________
consensus AAAATGAGTATTGAATACAATAGGGTTTAGAGTTTTAGGTGAAGTTGGTGAGTCAAAGAA
. : . : . : . : . : . :
JMSF010K14+ AGGAGAAAACGGAAAAGACTTGTTCAAGAATGGAGGCTTAAGCGTGTAGAGTGTTCCAAA
JMSF010J14+ AGGAGAAAACGGAAAAGACTTGTTCAAGAATGGAGGCTTAAGCGTGTAGAGTGTTCCAAA
JMSF002P18+ AGGAGAAAACGGAAAAGACTTGTTCAAGAATGGAGGCTTAAGCGTGTAGAGTGTTCCAAA
JMSF003P18+ AGGAGAAANCGGAAANGACTTGTTCAAGAATGGAGGCTTAAGCGTGTAGAGTGTTCCAAA
JMFF002H08+ AGGAGAAAACGGAAAAGACTTGTTCAAGAATGGAGGCTTAAGCGTGTAGAGTGTTCCAAA
____________________________________________________________
consensus AGGAGAAAACGGAAAAGACTTGTTCAAGAATGGAGGCTTAAGCGTGTAGAGTGTTCCAAA
. : . : . : . : . : . :
JMSF010K14+ CGCGCCACCGCCTT
JMSF010J14+ CGCGCCACCGCCTT
JMSF002P18+ CGCGCCACCGCCTTTCTTGGAAAGTGGTTGCGTCGGCTCCCTCTTAAACTTC
JMSF003P18+ CGCGCCACCNCCTTTCTTGGAAAGTGGTTGCGTCGGCTCCCTNTTAAACTTC
JMFF002H08+ CGCGCCACCGCCTTTCTTGGAAAGTGGTTGCGTCGGCTCCCTCTTAAACTTCAACAAATT
____________________________________________________________
consensus CGCGCCACCGCCTTTCTTGGAAAGTGGTTGCGTCGGCTCCCTCTTAAACTTCAACAAATT