Contig 010126:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016B09Sequence609010126 (5)gb|AEA86345.1|3e-85non-intrinsic ABC protein [Solanum nigrum]
JMFF025C18Sequence582007957 (3)ref|XP_004234346.1|2e-39PREDICTED: ABC transporter B family member 28 [Solanum lycopersicum]768010126 (5)ref|XP_009787383.1|2e-124PREDICTED: ABC transporter B family member 28 isoform X2 [Nicotiana sylvestris]
JMFN005D20Sequence600010126 (5)ref|XP_009787383.1|1e-105PREDICTED: ABC transporter B family member 28 isoform X2 [Nicotiana sylvestris]
JMSF033L09Sequence661007957 (3)ref|XP_004234346.1|4e-28PREDICTED: ABC transporter B family member 28 [Solanum lycopersicum]717010126 (5)ref|XP_009787383.1|6e-120PREDICTED: ABC transporter B family member 28 isoform X2 [Nicotiana sylvestris]
JMSF047C03Sequence676007957 (3)ref|XP_006353380.1|3e-46PREDICTED: ABC transporter B family member 28-like [Solanum tuberosum]720010126 (5)ref|XP_009787383.1|1e-122PREDICTED: ABC transporter B family member 28 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN005D20-                                               TTGAGTATGAGGACAGTGGCATCA
                      ____________________________________________________________
consensus                                                 TTGAGTATGAGGACAGTGGCATCA
 
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JMFN005D20-           AGCTTGGGATTTTCAAATCTGTAAATGAGTCTGTAACTAGGATTGCAGTTTATGTCTCTT
                      ____________________________________________________________
consensus             AGCTTGGGATTTTCAAATCTGTAAATGAGTCTGTAACTAGGATTGCAGTTTATGTCTCTT
 
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JMFN005D20-           TGATGGCCTTATATTGTCTTGGAGGGAGCAAAGTAAAAGCTGGCGAACTATCTGTGGGAA
                      ____________________________________________________________
consensus             TGATGGCCTTATATTGTCTTGGAGGGAGCAAAGTAAAAGCTGGCGAACTATCTGTGGGAA
 
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JMFN005D20-           CTGTGGCTTCTTTTATTGGATACACGTTTACCTTGACTTTTGCAGTTCAAGGGCTTGTCA
                      ____________________________________________________________
consensus             CTGTGGCTTCTTTTATTGGATACACGTTTACCTTGACTTTTGCAGTTCAAGGGCTTGTCA
 
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JMFN005D20-           ATACCTTTGGAGATCTTCGTGTGGCTTTTGCCTCTGTGGATAGAATCAATTCTGTGTTGT
                      ____________________________________________________________
consensus             ATACCTTTGGAGATCTTCGTGTGGCTTTTGCCTCTGTGGATAGAATCAATTCTGTGTTGT
 
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JMFN005D20-           CTGGAGCTGAAATTGATGAAGCCCTTGCTTATGCCTTACACAAGGACATGAAACAGAAGA
                      ____________________________________________________________
consensus             CTGGAGCTGAAATTGATGAAGCCCTTGCTTATGCCTTACACAAGGACATGAAACAGAAGA
 
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JMFN005D20-           ATGCACATGATAAAAATTTTAGACTATTTGTGGATAATGGTTCTGATGGCATGCGGTCTA
                      ____________________________________________________________
consensus             ATGCACATGATAAAAATTTTAGACTATTTGTGGATAATGGTTCTGATGGCATGCGGTCTA
 
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JMFN005D20-           CAAATTTGGGATACATGTCATCCTTGAAATCTGGTAGTAATGTGCGAAGCCTTGCACAGT
                      ____________________________________________________________
consensus             CAAATTTGGGATACATGTCATCCTTGAAATCTGGTAGTAATGTGCGAAGCCTTGCACAGT
 
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JMFN005D20-           CTGGTGATATTTGTCTTGAAGATGTACATTTTTCTTATCCAGTGAGGCCTGATGTAGAAA
                      ____________________________________________________________
consensus             CTGGTGATATTTGTCTTGAAGATGTACATTTTTCTTATCCAGTGAGGCCTGATGTAGAAA
 
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JMFN005D20-           TCCTTAGTGGTCTGAATTTGACCCTAAAATGTGGGACAGTTACTGCCCTAGTGGGCCCCA
rJMSF047C03+                                     AATGTGGGACAGTTACTGCCCTAGTGGGCCCCA
rJMSF033L09+                                     AATGTGGGACAGTTACTGCCCTAGTGGGCCCCA
rJMFF025C18+                     CTGAATTTGACCNTAAAATGTGGGACAGTTACTGCCTTAGTGGGCCCCA
                      ____________________________________________________________
consensus             TCCTTAGTGGTCTGAATTTGACCCTAAAATGTGGGACAGTTACTGCCCTAGTGGGCCCCA
 
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JMFN005D20-           GTGGCGCTGGGAAAAGTACTGTAGTACAGCTACTAG                        
rJMSF047C03+          GTGGCGCTGGGAAAAGTACTGTAGTACAGCTACTAGCACGTTTCTATGAGCCAACCAAGG
rJMSF033L09+          GTGGCGCTGGGAAAAGTACTGTAGTACAGCTACTAGCACGTTTCTATGAGCCAACCAAGG
rJMFF025C18+          GTGGCGCTGGGAAAAGTACTGTAGTACAGCTACTAGCACGTTTCTATGAGCCAACCAAGG
                      ____________________________________________________________
consensus             GTGGCGCTGGGAAAAGTACTGTAGTACAGCTACTAGCACGTTTCTATGAGCCAACCAAGG
 
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rJMSF047C03+          GTCGCATTACTGTTGCAGGAGAAGATTTGCGAACATTTGATAAGAGTGAATGGGCACGTG
rJMSF033L09+          GTCGCATTACTGTTGCAGGAGAAGATTTGCGAACATNTGATAAGAGTGAATGGGCACGTG
rJMFF025C18+          GTCGCATTACTGTTGCAGGAGAAGATTTGCGAACATTTGATAAGAGTGAATGGGCACGTG
rJMCP016B09-                                                             GGGCACGTG
                      ____________________________________________________________
consensus             GTCGCATTACTGTTGCAGGAGAAGATTTGCGAACATTTGATAAGAGTGAATGGGCACGTG
 
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rJMSF047C03+          CTGTGTCTCTAGTGAATCAAGAACCTGTTCTTTTCTCGGTATCTGTTGGGGAGAATATTG
rJMSF033L09+          CTGTGTCTCTAGTGAATCAAGAACCTGTTCTTTTCTCGGTATCTGTTGGGGAGAATATTG
rJMFF025C18+          CTGTGTCTCTAGTGAATCAAGAACCTGTTCTTTTCTCGGTATCTGTTGGGGAGAATATTG
rJMCP016B09-          gacTGTCTCatGTGAATCAAGAACgaGTTCTTTTCTCGGTATCTGTTGGGGAGAATATTG
                      ____________________________________________________________
consensus             CTGTGTCTCTAGTGAATCAAGAACCTGTTCTTTTCTCGGTATCTGTTGGGGAGAATATTG
 
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rJMSF047C03+          CATATGGTCTCCCAGATAAGGATGTATCCAAGGATGATGTGATAAAGGCAGCAAAAGCTG
rJMSF033L09+          CATATGGTCTCCCAGATAAGGATGTATCCAAGGATGATGTGATAAAGGCAGCAAAAGCTG
rJMFF025C18+          CATATGGTCTCCCAGATAAGGATGTATCCAAGGATGATGTGATAAAGGCAGCAAAAGCTG
rJMCP016B09-          CATATGGTCTCCCActaAAGGATGTATCCAAGGATGATGTGATAAAGGCAGCAAAAGCTG
                      ____________________________________________________________
consensus             CATATGGTCTCCCAGATAAGGATGTATCCAAGGATGATGTGATAAAGGCAGCAAAAGCTG
 
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rJMSF047C03+          CAAATGCTCATGAATTCATAGTTTCATTGCCACAGGGTTACGATACATTGGTTGGTGAGC
rJMSF033L09+          CAAATGCTCATGAATTCATAGTTTCATTGCCACAGGGTTACGATACATTGGTTGGTGAGC
rJMFF025C18+          CAAATGCTCATGAATTCATAGTTTCATTGCCACAGGGTTACGATACATTGGTTGGTGAGC
rJMCP016B09-          CAAATGCTCATGAATTgtTAGaTTCAaacCCACAGGGTTACctTACAaacGTTGGTGAGC
                      ____________________________________________________________
consensus             CAAATGCTCATGAATTCATAGTTTCATTGCCACAGGGTTACGATACATTGGTTGGTGAGC
 
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rJMSF047C03+          GTGGGGGATTGTTAAGTGGTGGACAGAGGCAGAGGATTGCCATTGCCAGAGCTTTGCTCA
rJMSF033L09+          GTGGGGGATTGTTAAGTGGTGGACAGAGGCAGAGGATTGCCATTGCCAGAGCTTTGCTCA
rJMFF025C18+          GTGGGGGATTGTTAAGTGGTGGACAGAGGCAGAGGATTGCCATTGCCAGAGCTTTGCTCA
rJMCP016B09-          GTGGGGGAaacTTAAGTGGTGGACAGAGGCAGAGGATTGCCAaacggAGAGCTTTGCTCA
                      ____________________________________________________________
consensus             GTGGGGGATTGTTAAGTGGTGGACAGAGGCAGAGGATTGCCATTGCCAGAGCTTTGCTCA
 
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rJMSF047C03+          AGGATGCCCCAATCCTAATTCTTGATGAGGCCACTAGTGCATTGGATACTGTTAGTGAGC
rJMSF033L09+          AGGATGCCCCAATCCTAATTCTTGATGAGGCCACTAGTGCATTGGATACTGTTAGTGAGC
rJMFF025C18+          AGGATGCCCCAATCCTAATTCTTGATGAGGCCACTAGTGCATTGGATACTGTTAGTGAGC
rJMCP016B09-          AGGATGCCCCAATCCTAATTCTTGATGAGGCCACTAGTGCATTGGATACTGTTAGTGAGC
                      ____________________________________________________________
consensus             AGGATGCCCCAATCCTAATTCTTGATGAGGCCACTAGTGCATTGGATACTGTTAGTGAGC
 
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rJMSF047C03+          GTCTAGTCCAGGATGCGTTGAACCAGTTAATGAAGGGAAGAACAACATTAGTGATTGCTC
rJMSF033L09+          GTCTAGTCCAGGATGCGTTGAACCAGTTAATGAAGGGAAGAACAACATTAGTGATTGCTC
rJMFF025C18+          GTCTAGTCCAGGATGCGTTGAACCAGTTAATGAAGGGAAGAACAACATTAGTGATTGCTC
rJMCP016B09-          GTCTAGTCCAGGATGCGTTGAACCAGTTAATGAAGGGAAGAACAACATTAGTGATTGCTC
                      ____________________________________________________________
consensus             GTCTAGTCCAGGATGCGTTGAACCAGTTAATGAAGGGAAGAACAACATTAGTGATTGCTC
 
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rJMSF047C03+          ATAGATTGAGCACTGTTCAGAATGCAGATGTGATTGCTGTTTGTTGTGATGGAAAGATTG
rJMSF033L09+          ATAGATTGAGCACTGTTCAGAATGCAGATGTGATTGCTGTTTGTTGTGATGGAAAGATTG
rJMFF025C18+          ATAGATTGAGCACTGTTCAGAATGCAGATGTGATTGCTGTTTGTTGTGATGGAAAGATTG
rJMCP016B09-          ATAGATTGAGCACTGTTCAGAATGCAGATGTGATTGCTGTTTGTTGTGATGGAAAGATTG
                      ____________________________________________________________
consensus             ATAGATTGAGCACTGTTCAGAATGCAGATGTGATTGCTGTTTGTTGTGATGGAAAGATTG
 
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rJMSF047C03+          CAGAGCTGGGGACACATTTTGAGTTGTTGGAAAGGAAGGGTCAATATGCTTCTCTCGTCG
rJMSF033L09+          CAGAGCTGGGGACACATTTTGAGTTGTTGGAAAGGAAGGGTCAATATGTTTCTCTCGTCG
rJMFF025C18+          CAGAGCTGGGGACACATTTTGAGTTGTTGGAAAGGAAGGGTCAATATGCTTCTCTCGTCG
rJMCP016B09-          CAGAGCTGGGGACACATTTTGAGTTGTTGGAAAGGAAGGGTCAATATGCTTCTCTCGTCG
                      ____________________________________________________________
consensus             CAGAGCTGGGGACACATTTTGAGTTGTTGGAAAGGAAGGGTCAATATGCTTCTCTCGTCG
 
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rJMSF047C03+          CCTCTCAGAGACTTGCTTTCGACTGATTTTATTTTATTTTTATAATCGCATATATCATGT
rJMSF033L09+          CCTCTCAGAGACTTGCTTTCGACTGATTTTATTTTATTTTTATAATCGCATATATCATGT
rJMFF025C18+          CCTCTCAGAGACTTGCTTTCGACTGATTTTATTTTATTTTTATAATCGCATATATCATGT
rJMCP016B09-          CCTCTCAGAGACTTGCTTTCGACTGATTTTATTTTATTTTTATAATCGCATATATCATGT
                      ____________________________________________________________
consensus             CCTCTCAGAGACTTGCTTTCGACTGATTTTATTTTATTTTTATAATCGCATATATCATGT
 
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rJMSF047C03+          GACAACTGAACTTATATAACTGCC                                    
rJMSF033L09+          GACAACTGAACTTATATAACTGCC                                    
rJMFF025C18+          GACAACTGAACTTATATAACTGCCACTGCACTTATAGATTAACTATAAAATANAAAA   
rJMCP016B09-          GACAACTGAACTTATATAACTGCCACTGCACTTATAGATTAACTATAAAATATAAAAAGA
                      ____________________________________________________________
consensus             GACAACTGAACTTATATAACTGCCACTGCACTTATAGATTAACTATAAAATATAAAAAGA