Contig 010124:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP004H03Sequence523010124 (4)
JMCP011A08Sequence234010124 (4)
JMCP011D05Sequence523010124 (4)
JMCP012H09Sequence412010124 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP011A08+ GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
rJMCP004H03+ GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
rJMCP011D05+ GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
                      ____________________________________________________________
consensus GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
 
. : . : . : . : . : . :
rJMCP011A08+ TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
rJMCP004H03+ TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
rJMCP012H09+ aaacatCCCAAGagaacgttcgaTATgacattggtccacAGcaatcacTCTaagattac
rJMCP011D05+ TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
                      ____________________________________________________________
consensus TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
 
. : . : . : . : . : . :
rJMCP011A08+ GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
rJMCP004H03+ GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
rJMCP012H09+ acttaGGtatagtgACCgaaGAaact-caacGAGAACTTGtaaTact-ccactggggcta
rJMCP011D05+ GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
                      ____________________________________________________________
consensus GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
 
. : . : . : . : . : . :
rJMCP011A08+ GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
rJMCP004H03+ GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
rJMCP012H09+ ctcaACCTaga-ctcgtactaTagggagaaaaacctAtCTTTCCCCCagaagacaaacat
rJMCP011D05+ GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
                      ____________________________________________________________
consensus GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
 
. : . : . : . : . : . :
rJMCP011A08+ GTTGACTCACC
rJMCP004H03+ GTTGACTCACCAACACCTAAGCCCGAACCGAAAAAGAGGAAAAAGTGCAAGGCCTCATAC
rJMCP012H09+ GaactgTCAggAAgtggatAGCCCGAACCGAAAAAGAGGAAAAAcTGCAAGGCCTCATAg
rJMCP011D05+ GTTGACTCACCAACACCTAAGCCCGAACCGAAAAAGAGGAAAAAGTGCAAGGCCTCATAC
                      ____________________________________________________________
consensus GTTGACTCACCAACACCTAAGCCCGAACCGAAAAAGAGGAAAAAGTGCAAGGCCTCATAC
 
. : . : . : . : . : . :
rJMCP004H03+ TCTTCTCTTGATAGCTCCCTCGTCCGGTCCACGCGGCCTCAACTAGGGTCACAGGATTGG
rJMCP012H09+ agTTCTCTacAatcgaCCgagcTCCGGTCCACGCGGCCTgttgatGGGTCACAcct-acc
rJMCP011D05+ TCTTCTCTTGATAGCTCCCTCGTCCGGTCCACGCGGCCTCAACTAGGGTCACAGGATTGG
                      ____________________________________________________________
consensus TCTTCTCTTGATAGCTCCCTCGTCCGGTCCACGCGGCCTCAACTAGGGTCACAGGATTGG
 
. : . : . : . : . : . :
rJMCP004H03+ GAGGATATTAAAGGTCTACTTAGTCTTGGCGTagaGACTTACCCTCCTAAACTTGAGGAT
rJMCP012H09+ GAGGATATTAAAGGagaACaatcaggccgcgaggggggggggggTggatttgaactGGAT
rJMCP011D05+ GAGGATATTAAAGGTCTACTTAGTCTTGGCGTTCTGACTTACCCTCCTAAACTTGAGGAT
                      ____________________________________________________________
consensus GAGGATATTAAAGGTCTACTTAGTCTTGGCGTTCTGACTTACCCTCCTAAACTTGAGGAT
 
. : . : . : . : . : . :
rJMCP004H03+ AATAagagaGACCCACTCCTCGATAAATATTTTGGGGTCTACCTTCTGTCGCTACAGGTT
rJMCP012H09+ AAatagagacACCCtgTCCTCGATAAATAT
rJMCP011D05+ AATATCTCTGACCCACTCCTCGATAAATATTTTGGGGTCTACCTTCTGTCGCTACAGGTT
                      ____________________________________________________________
consensus AATATCTCTGACCCACTCCTCGATAAATATTTTGGGGTCTACCTTCTGTCGCTACAGGTT
 
. : . : . : . : . : . :
rJMCP004H03+ GGGTTGCAGTTTCCCCTTCATAGGTTTGTGATAGACTTTATGAACTTCTACGAGATAGCC
rJMCP011D05+ GGGTTGCAGTTTCCCCTTCATAGGTTTGTGATAGACTTTATGAACTTCTACGAGATAGCC
                      ____________________________________________________________
consensus GGGTTGCAGTTTCCCCTTCATAGGTTTGTGATAGACTTTATGAACTTCTACGAGATAGCC