Contig 010116: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF052N13+ TTGNCANCGANTGAAGATGCTGNCTTGAAGGCCAGAATGA
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consensus TTGNCANCGANTGAAGATGCTGNCTTGAAGGCCAGAATGA
. : . : . : . : . : . :
rJMSF052N13+ ATTTNGAAGAAGNAGTAGGCAATGTGNAGCTCTTAACTTGTTGTGAACAAATTGTTATGA
____________________________________________________________
consensus ATTTNGAAGAAGNAGTAGGCAATGTGNAGCTCTTAACTTGTTGTGAACAAATTGTTATGA
. : . : . : . : . : . :
rJMSF052N13+ AGTGCAATTATCAAGGTGACAATGTACAACTTTAAGATGGGTGCAAGAGATGCATCCTCC
____________________________________________________________
consensus AGTGCAATTATCAAGGTGACAATGTACAACTTTAAGATGGGTGCAAGAGATGCATCCTCC
. : . : . : . : . : . :
rJMSF052N13+ ACTGCTCCTTTGAAGCTTGCCTGGCTGGTACCACATGGGAAACAAACGGCTCTCTCACCG
____________________________________________________________
consensus ACTGCTCCTTTGAAGCTTGCCTGGCTGGTACCACATGGGAAACAAACGGCTCTCTCACCG
. : . : . : . : . : . :
rJMSF052N13+ TTTCACATAGCAACAAGAATCATCCTCACTTGGATATAATTACTTCTGAAGCACATACTA
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consensus TTTCACATAGCAACAAGAATCATCCTCACTTGGATATAATTACTTCTGAAGCACATACTA
. : . : . : . : . : . :
rJMSF052N13+ GTTAAATGGCGGTTGTCATTGCAGAATGCGCCTCATGATCATCATCTTCGTCTGCATCTT
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consensus GTTAAATGGCGGTTGTCATTGCAGAATGCGCCTCATGATCATCATCTTCGTCTGCATCTT
. : . : . : . : . : . :
rJMSF052N13+ CATCACCGAAGTTTTGGTTTATCAAATCTTCCCTGGATCGGAGTACATTTTCATGCCAGT
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consensus CATCACCGAAGTTTTGGTTTATCAAATCTTCCCTGGATCGGAGTACATTTTCATGCCAGT
. : . : . : . : . : . :
rJMSF052N13+ TAAGGTGCTCCCGGCATACCCTGAAGGAACAACATATTGATATAGAGCATTCATATTCAT
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consensus TAAGGTGCTCCCGGCATACCCTGAAGGAACAACATATTGATATAGAGCATTCATATTCAT
. : . : . : . : . : . :
rJMSF035D02+ ATTGACAATGGACATCTCTAATATAAG
rJMSF052N13+ AAGCTTAATGGAGCAATGAAGAACGTGATACAAATTGACAATGGACATCTCTAATATAAG
____________________________________________________________
consensus AAGCTTAATGGAGCAATGAAGAACGTGATACAAATTGACAATGGACATCTCTAATATAAG
. : . : . : . : . : . :
rJMSF035D02+ ATGGATGCAGGAGGACTGGAGATGCATCATTCACTGCACTGTACTACTCTGTTTTCAAGT
rJMSF052N13+ ATGGATGCAGGAGGACTGGAGATGCATCATTCACTGCACTGTACTACTCTGTTTTCAAGT
____________________________________________________________
consensus ATGGATGCAGGAGGACTGGAGATGCATCATTCACTGCACTGTACTACTCTGTTTTCAAGT
. : . : . : . : . : . :
rJMSF035D02+ ACGCTTCTAATGAATTGTTAGGACAAATGATGATTTCTACTTGGTGGAATAAAAACTACT
rJMSF052N13+ ACGCTTCTAATGAATTGTTAGGACAAATGATGATTTCTACTTGGTGGAATAAAAACTACT
____________________________________________________________
consensus ACGCTTCTAATGAATTGTTAGGACAAATGATGATTTCTACTTGGTGGAATAAAAACTACT
. : . : . : . : . : . :
rJMSF035D02+ CTGTTTTGGATCAGGTATAAGATGAAGTCGTGCTAGCATCCGGATAAAACTTTTCTTTAC
rJMSF052N13+ CTGTTTTGGATCAGGTATAAGATGAAGTCGTGCTAGCATCCGGATAAAACTTTTCTTTAC
____________________________________________________________
consensus CTGTTTTGGATCAGGTATAAGATGAAGTCGTGCTAGCATCCGGATAAAACTTTTCTTTAC
. : . : . : . : . : . :
rJMSF035D02+ TTGACAGCAATTGAAGATGCTGNCTATGAAGGACGAGAATGAATTTTGGAAGAAGGAAGT
rJMSF052N13+ TTGACAGCAATTGAAGATGCTGACTATGAAGGACGAGAATGAATTTTGGAAGAAGGAAGT
____________________________________________________________
consensus TTGACAGCAATTGAAGATGCTGACTATGAAGGACGAGAATGAATTTTGGAAGAAGGAAGT
. : . : . : . : . : . :
rJMSF035D02+ AGGCAATGTGGAACCTCTTAGCTTGTTGTCAACAAATTATTATGAACTGCAATTAATCAA
rJMSF052N13+ AGGCAATGTGGAACCTCTTAGCTTGTTGTCAACAAATTATTATGAACTGCAATTAATCAA
____________________________________________________________
consensus AGGCAATGTGGAACCTCTTAGCTTGTTGTCAACAAATTATTATGAACTGCAATTAATCAA
. : . : . : . : . : . :
rJMSF035D02+ GGTGACAATGTACAACTGTAAGATGGGTGCAAGAGATGCATCCTTAGCTTCACTGCTCCT
rJMSF052N13+ ---GACAATGTACAACTGTAAGATGGGTGCAAGAGATGCATCCTTAGCTTCACTGCTCCT
____________________________________________________________
consensus GGTGACAATGTACAACTGTAAGATGGGTGCAAGAGATGCATCCTTAGCTTCACTGCTCCT
. : . : . : . : . : . :
rJMSF035D02+ TTGAACAATGATCAAGGATTNCACAGTATTTGCTGGT
rJMSF052N13+ TTGAACAATGATCAAGGATTACACAGTATTTGCTGGTGCAATTTGCAGTCATTCATAATC
____________________________________________________________
consensus TTGAACAATGATCAAGGATTACACAGTATTTGCTGGTGCAATTTGCAGTCATTCATAATC
. : . : . : . : . : . :
rJMSF052N13+ TTCTTCTTTTTTTGAAATTTGTAATTAAGGAATATGCAAATGTGTTTGTAAACATTCAAC
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consensus TTCTTCTTTTTTTGAAATTTGTAATTAAGGAATATGCAAATGTGTTTGTAAACATTCAAC