Contig 010111:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF001G12+                            CTATATAACCCGANCCCAACGCCCCCTAAATGATTTTTCGGA
                      ____________________________________________________________
consensus                               CTATATAACCCGANCCCAACGCCCCCTAAATGATTTTTCGGA
 
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rJMSF001G12+          GAAAAAAATTCTGGGTTTAAGCAGGATATGGAGCCTACATTAGTCCCTTTCTCAGAAACA
rJMSF051O06+                                                             TCAGAAACA
                      ____________________________________________________________
consensus             GAAAAAAATTCTGGGTTTAAGCAGGATATGGAGCCTACATTAGTCCCTTTCTCAGAAACA
 
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rJMSF001G12+          ACTGGCTTTCAGTGGTACGATGATGTTGGTGAATTTGCAGATCAAGGG-TTTTGTCCTAC
rJMSF051O06+          ACTGGCTTTCAGTGGTACGATGATG----TGAATTTGCAGATCAAGGGTTTTTGTCCTAC
                      ____________________________________________________________
consensus             ACTGGCTTTCAGTGGTACGATGATGTTGGTGAATTTGCAGATCAAGGGTTTTTGTCCTAC
 
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rJMSF001G12+          CTTATTACAAGGATTCAACGAGACAACCTGTTTGGTTCCCGATAAAGATTCAGATGTTGG
rJMSF051O06+          CTTATNACAAGGATTCAACGAGACAACCTGTTTGGTTCCCGATAAAGATTCAGATGTTGG
                      ____________________________________________________________
consensus             CTTATTACAAGGATTCAACGAGACAACCTGTTTGGTTCCCGATAAAGATTCAGATGTTGG
 
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rJMSF001G12+          CGATAGTTCGGGTGCAGCAAATAATCATAACGAAGGGCAATCAAACCATTCTAGCCATAC
rJMSF051O06+          CGATAGTTCGGGTGCAGCAAATAATCATAACGAAGGGCAATCAAACCATTCTAGCCATAC
                      ____________________________________________________________
consensus             CGATAGTTCGGGTGCAGCAAATAATCATAACGAAGGGCAATCAAACCATTCTAGCCATAC
 
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rJMSF001G12+          TGAAACCTTCCAAGTGCCTCATAAAGTTGCTCCTCGTGAGCTAAACAGCCGGGAAAGAGA
rJMSF051O06+          TGAAACCTTCCAAGTGCCTCATAAAGTTGCTCCTCGTGAGCTAAACAGCCGGGAAAGAGA
                      ____________________________________________________________
consensus             TGAAACCTTCCAAGTGCCTCATAAAGTTGCTCCTCGTGAGCTAAACAGCCGGGAAAGAGA
 
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rJMSF001G12+          GACAGCCATTTCTCGTTACAAGGAGAAAAAGAAAACCAGGAGATATGAGAAGCAAATTAG
rJMSF051O06+          GACAGCCATTTCTCGTTACAAGGAGAAAAAGAAAACCAGGAGATATGAGAAGCAAATTAG
                      ____________________________________________________________
consensus             GACAGCCATTTCTCGTTACAAGGAGAAAAAGAAAACCAGGAGATATGAGAAGCAAATTAG
 
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rJMSF001G12+          GTATGAATCAAGAAAAGTTCGCGCAGAGACTAGGATAAGAATCAAAGGGCGTTTTGCCAA
rJMSF051O06+          GTATGAATCAAGAAAAGTTCGCGCAGAGACTAGGATAAGAATCAAAGGGCGTTTTGCCAA
                      ____________________________________________________________
consensus             GTATGAATCAAGAAAAGTTCGCGCAGAGACTAGGATAAGAATCAAAGGGCGTTTTGCCAA
 
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rJMSF001G12+          GATAGATCAAAGAGATTCTGGTACTACGCGTTGATGTGTTCAAAGGTTGTTTTGTCAAGA
rJMSF051O06+          GATAGATCAAAGAGATTCTGGTACTACGCGTTGATGTGTTCAAAGGTTGTTTTGTCAAGA
                      ____________________________________________________________
consensus             GATAGATCAAAGAGATTCTGGTACTACGCGTTGATGTGTTCAAAGGTTGTTTTGTCAAGA
 
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rJMSF001G12+          ATTTAACAGCAAGTGAAGCTTGGGTAGATCATTGAGATGAGAATGTAAGTGTGAAGTACT
rJMSF051O06+          ATTTAACAGCAAGTGAAGCTTGGGTAGATCATTGAGATGAGAATGTAAGTGTGAAGTACT
                      ____________________________________________________________
consensus             ATTTAACAGCAAGTGAAGCTTGGGTAGATCATTGAGATGAGAATGTAAGTGTGAAGTACT
 
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rJMSF001G12+          TAGGTCTTTAAAGCAGGTGTTTATGTATAGTATAACTTGGTAAAACCAGAACATAGCTCT
rJMSF051O06+          TAGGTCTTTAAAGCAGGTGTTTATGTATAGTATAACTTGGTAAAACCAGAACATAGCTCT
                      ____________________________________________________________
consensus             TAGGTCTTTAAAGCAGGTGTTTATGTATAGTATAACTTGGTAAAACCAGAACATAGCTCT
 
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rJMSF001G12+          ATTAGATGTAAACTTTTAGTATGGAGTATTTGTTGTATCAATGTTGTGTCTTTGTAGCTG
rJMSF051O06+          ATTAGATGTAAACTTTTAGTATGGAGTATTTGTTGTATCAATGTTGTGTCTTTGTAGCTG
                      ____________________________________________________________
consensus             ATTAGATGTAAACTTTTAGTATGGAGTATTTGTTGTATCAATGTTGTGTCTTTGTAGCTG
 
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rJMSF001G12+          AGAATCACAGATAGATACAGATGAAAAT                                
rJMSF051O06+          AGAATCACAGATAGATACAGATGAAAATTTACTGTATTTACAGAATGCCAGCAAAAGTCT
                      ____________________________________________________________
consensus             AGAATCACAGATAGATACAGATGAAAATTTACTGTATTTACAGAATGCCAGCAAAAGTCT