clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF032J21 | Sequence | 633 | 010109 (6) | ref|XP_010325349.1| | 9e-46 | PREDICTED: protein ABIL2-like isoform X2 [Solanum lycopersicum] | 628 | 010109 (6) | ref|XP_009629169.1| | 2e-07 | PREDICTED: protein ABIL2-like isoform X1 [Nicotiana tomentosiformis] ref|XP_0096 |
JMSF038F17 | Sequence | 670 | 010109 (6) | ref|XP_010325349.1| | 3e-55 | PREDICTED: protein ABIL2-like isoform X2 [Solanum lycopersicum] | 960 | 010109 (6) | ref|XP_009629169.1| | 4e-67 | PREDICTED: protein ABIL2-like isoform X1 [Nicotiana tomentosiformis] ref|XP_0096 |
JMSF051K15 | Sequence | 635 | 010109 (6) | ref|XP_010325349.1| | 1e-53 | PREDICTED: protein ABIL2-like isoform X2 [Solanum lycopersicum] | 777 | 010109 (6) | ref|XP_009629169.1| | 6e-21 | PREDICTED: protein ABIL2-like isoform X1 [Nicotiana tomentosiformis] ref|XP_0096 |
This contig is upended
. : . : . : . : . : . :
JMSF051K15- GAAGCTTTACCCTCTT
JMSF032J21- GAAGCTTTACCCTCTT
JMSF038F17- GAAGCTTTACCCTCTT
____________________________________________________________
consensus GAAGCTTTACCCTCTT
. : . : . : . : . : . :
JMSF051K15- CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
JMSF032J21- CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
JMSF038F17- CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
rJMSF038F17+ CTGAATTAGNTC
____________________________________________________________
consensus CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
. : . : . : . : . : . :
JMSF051K15- ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
JMSF032J21- ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCA--ACAGAACAAACATTACTGACA
JMSF038F17- ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
rJMSF038F17+ ATCANGAAAGNAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
____________________________________________________________
consensus ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
. : . : . : . : . : . :
JMSF051K15- GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
JMSF032J21- GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
JMSF038F17- GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
rJMSF038F17+ GNTTGAAGGATTTGAAGAATNTGAGGAAACAGTTTTACTCGGNTGCAGAATATTTTGAAG
____________________________________________________________
consensus GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
. : . : . : . : . : . :
JMSF051K15- TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
JMSF032J21- TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
JMSF038F17- TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
rJMSF038F17+ TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
____________________________________________________________
consensus TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
. : . : . : . : . : . :
JMSF051K15- GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
JMSF032J21- GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
JMSF038F17- GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
rJMSF038F17+ GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
____________________________________________________________
consensus GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
. : . : . : . : . : . :
JMSF051K15- TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
JMSF032J21- TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
JMSF038F17- TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
rJMSF038F17+ TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
rJMSF051K15+ TTGGATGAAAAAGTTGGTGAA-TTTNTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
____________________________________________________________
consensus TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
. : . : . : . : . : . :
JMSF051K15- AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
JMSF032J21- AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
JMSF038F17- AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
rJMSF038F17+ AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
rJMSF051K15+ AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
____________________________________________________________
consensus AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
. : . : . : . : . : . :
JMSF051K15- TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
JMSF032J21- TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
JMSF038F17- TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
rJMSF038F17+ TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
rJMSF032J21+ TTGTATCAATCCAGGTTCAGATGTGGATACAG
rJMSF051K15+ TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
____________________________________________________________
consensus TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
. : . : . : . : . : . :
JMSF051K15- TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
JMSF032J21- TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
JMSF038F17- TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
rJMSF038F17+ TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
rJMSF032J21+ TGTCTGATTTAGGNAANTCANACNGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
rJMSF051K15+ TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
____________________________________________________________
consensus TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
. : . : . : . : . : . :
JMSF051K15- GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
JMSF032J21- GGGACGAAATGCATCANAACCAGCACCACCAACTCCAGCAAGGNTTTCTAGCAACAAAAA
JMSF038F17- GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
rJMSF038F17+ GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
rJMSF032J21+ GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
rJMSF051K15+ GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
____________________________________________________________
consensus GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
. : . : . : . : . : . :
JMSF051K15- CAAAAGAGCATCCTACCTT
JMSF032J21- CAAAAGAGCATCCTACCTT
JMSF038F17- CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTA
rJMSF038F17+ CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
rJMSF032J21+ CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
rJMSF051K15+ CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
____________________________________________________________
consensus CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
. : . : . : . : . : . :
rJMSF038F17+ CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
rJMSF032J21+ CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
rJMSF051K15+ CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
____________________________________________________________
consensus CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
. : . : . : . : . : . :
rJMSF038F17+ CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGACTCAAGCGCTCTGAATCATACA
rJMSF032J21+ CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGANTCAAGCGCTCTGAATCATACA
rJMSF051K15+ CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGACTCAAGCGCTCTGAATCATACA
____________________________________________________________
consensus CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGACTCAAGCGCTCTGAATCATACA
. : . : . : . : . : . :
rJMSF038F17+ TTCACAGATCACCCCCTTTCAGTCCCTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
rJMSF032J21+ TTCACAGATCACCCCCTTTCAGTCCNTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
rJMSF051K15+ TTCACAGATCACCCCCTTTCAGTCCCTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
____________________________________________________________
consensus TTCACAGATCACCCCCTTTCAGTCCCTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
. : . : . : . : . : . :
rJMSF038F17+ GGACAATTTCACTGCCCACAAAGCCTGCAAAACCTACTTCACAGAATATGAAGAAACTGC
rJMSF032J21+ GGACAATTTCACTGCCCACAAAGCCTGCAAAACNTACTTCACAGAATATGAAGAAACTGC
rJMSF051K15+ GGACAATTTCACTGCCCACAAAGCCTGCAAAACCTACTTCACAGAATATGAAGAAACTGC
____________________________________________________________
consensus GGACAATTTCACTGCCCACAAAGCCTGCAAAACCTACTTCACAGAATATGAAGAAACTGC
. : . : . : . : . : . :
rJMSF038F17+ AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
rJMSF032J21+ AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
rJMSF051K15+ AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
____________________________________________________________
consensus AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
. : . : . : . : . : . :
rJMSF038F17+ AAGCTAAGGATATTGAGATATTTCACAGTCTTGTAATTT
rJMSF032J21+ AAGCTAAGGATATTGAGATATTTCACAGTCTNGTAATTTTACACAAAATTCTTAAATAAA
rJMSF051K15+ AAGCTAAGGATATTGAGATATTTCACAGTCTTATAATTTTACACAAAATTCTTAAATAAA
____________________________________________________________
consensus AAGCTAAGGATATTGAGATATTTCACAGTCTTGTAATTTTACACAAAATTCTTAAATAAA
. : . : . : . : . : . :
rJMSF032J21+ GCAACTTAAAGAATTTCATTCATATTCTTGTATTTTAAGTTTACATCTGAACC
rJMSF051K15+ GCAACTTAAAGAATTTCATTCATATTCTTGTATTTTAAGTTTACATCTGAACCCTGTGCT
____________________________________________________________
consensus GCAACTTAAAGAATTTCATTCATATTCTTGTATTTTAAGTTTACATCTGAACCCTGTGCT