Contig 010101:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF049L12Sequence654003897 (2)ref|XP_009799354.1|4e-73PREDICTED: magnesium transporter MRS2-4-like [Nicotiana sylvestris] ref|XP_00979747010101 (2)ref|XP_009602807.1|5e-99PREDICTED: magnesium transporter MRS2-4 [Nicotiana tomentosiformis]
JMSF050L12Sequence516003532 (4)631010101 (2)ref|XP_009602807.1|6e-99PREDICTED: magnesium transporter MRS2-4 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050L12+ GTGAGAGATGAAAT
rJMSF049L12+ ACGGGTACAAAAGGTGAGAGATGAAAT
                      ____________________________________________________________
consensus ACGGGTACAAAAGGTGAGAGATGAAAT
 
. : . : . : . : . : . :
rJMSF050L12+ CGAACACCTTTTAGATGATAACGAAGACATGGCCCATTTGTACTTGACTAGGAAATGGAT
rJMSF049L12+ CGAACACCTTTTAGATGATAACGAAGACATGGCCCATTTGTACTTGACTAGGAAATGGAT
                      ____________________________________________________________
consensus CGAACACCTTTTAGATGATAACGAAGACATGGCCCATTTGTACTTGACTAGGAAATGGAT
 
. : . : . : . : . : . :
rJMSF050L12+ TCATAATCAACAACCTGAAGCTCTATTATTGGGAACTACTGCCTCAAATGCAATTAACCC
rJMSF049L12+ TCATAATCAACAACCTGAAGCTCTATTATTGGGAACTACTGCCTCAAATGCAATTAACCC
                      ____________________________________________________________
consensus TCATAATCAACAACCTGAAGCTCTATTATTGGGAACTACTGCCTCAAATGCAATTAACCC
 
. : . : . : . : . : . :
rJMSF050L12+ AGTCGTGCCTAATCTTCGAAGGCTTAGTTCAATCAGAAGTGGAAGCTTTGTTAGCAACTT
rJMSF049L12+ AGTCGTGCCTAATCTTCGAAGGCTTAGTTCAATCAGAAGTGGAAGCTTTGTTAGCAACTT
                      ____________________________________________________________
consensus AGTCGTGCCTAATCTTCGAAGGCTTAGTTCAATCAGAAGTGGAAGCTTTGTTAGCAACTT
 
. : . : . : . : . : . :
rJMSF050L12+ TTTAAATGATGATGTGGAAGATCTGGAGATGTTGCTGGAGGCTTACTTCATGCAGTTGGA
rJMSF049L12+ TTTAAATGATGATGTGGAAGATCTGGAGATGTTGCTGGAGGCTTACTTCATGCAGTTGGA
                      ____________________________________________________________
consensus TTTAAATGATGATGTGGAAGATCTGGAGATGTTGCTGGAGGCTTACTTCATGCAGTTGGA
 
. : . : . : . : . : . :
rJMSF050L12+ AGGCACCCGTAATAAGATATTATCTGTGCGCGAGTACATAGATGACACGGAGGACTACGT
rJMSF049L12+ AGGCACCCGTAATAAGATATTATCTGTGCGCGAGTACATAGATGACACGGAGGACTACGT
                      ____________________________________________________________
consensus AGGCACCCGTAATAAGATATTATCTGTGCGCGAGTACATAGATGACACGGAGGACTACGT
 
. : . : . : . : . : . :
rJMSF050L12+ CAACATCCAGCTGGACAATCAACGAAACGAACTGATTCAACTACAGCTGATACTGACCAT
rJMSF049L12+ CAACATCCAGCTGGACAATCAACGAAACGAACTGATTCAACTACAGCTGATACTGACCAT
                      ____________________________________________________________
consensus CAACATCCAGCTGGACAATCAACGAAACGAACTGATTCAACTACAGCTGATACTGACCAT
 
. : . : . : . : . : . :
rJMSF050L12+ CGCATCATTTGCCATAGCTGTGGAGACCTTGGTCGCGGGTTGGTTTGGCATGAACATCCA
rJMSF049L12+ CGCATCATTTGCCATAGCTGTGGAGACCTTGGTCGCGGGTTGGTTTGGCATGAACATCCA
                      ____________________________________________________________
consensus CGCATCATTTGCCATAGCTGTGGAGACCTTGGTCGCGGGTTGGTTTGGCATGAACATCCA
 
. : . : . : . : . : . :
rJMSF050L12+ TTGTGTTCTATACGATATTGATGGGATATTTTGGCCATTCGTTGGCGGTATGACAGCTGC
rJMSF049L12+ TTGTGTTCTATACGATATTGATGGGATATTTTGGCCATTCGTTGGCGGTATGACAGCTGC
                      ____________________________________________________________
consensus TTGTGTTCTATACGATATTGATGGGATATTTTGGCCATTCGTTGGCGGTATGACAGCTGC
 
. : . : . : . : . : . :
rJMSF050L12+ TTGTATAATTCTCTTCTTTATCATGCTAGGNTACGCCAGATGGAAGAAGCTACTCGGCTC
rJMSF049L12+ TTGTATAATTCTCTTCTTTATCATGCTAGGCTACGCCAGATGGAAGAAGCTACTCGGCTC
                      ____________________________________________________________
consensus TTGTATAATTCTCTTCTTTATCATGCTAGGCTACGCCAGATGGAAGAAGCTACTCGGCTC
 
. : . : . : . : . : . :
rJMSF050L12+ ATAAACGCCTCCTCACACGCTTAGTTCCACGTTATNTNTATCACCGANCCATGCCAAACT
rJMSF049L12+ ATAAACGCCTCCTCACACGCTTAGTTCCACGTTATCTCTATCACCGATCCATGCCAAACT
                      ____________________________________________________________
consensus ATAAACGCCTCCTCACACGCTTAGTTCCACGTTATCTCTATCACCGATCCATGCCAAACT
 
. : . : . : . : . : . :
rJMSF050L12+ TTCCTGTCATGAAATCA
rJMSF049L12+ TTCCTGTCATGAAATCATGATAGCTTTAAAGCCAACAAGTTATGTTATTTCATGTGAAAT
                      ____________________________________________________________
consensus TTCCTGTCATGAAATCATGATAGCTTTAAAGCCAACAAGTTATGTTATTTCATGTGAAAT
 
. : . : . : . : . : . :
rJMSF049L12+ TGTATTTATCCCCACAATCCCCATCATTCCATGTGCAACTTGACAGCCTAACATTCCATA
                      ____________________________________________________________
consensus TGTATTTATCCCCACAATCCCCATCATTCCATGTGCAACTTGACAGCCTAACATTCCATA