Contig 010095:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF048L06Sequence689010095 (2)ref|XP_009607571.1|120PREDICTED: uncharacterized protein LOC104101767 [Nicotiana tomentosiformis]780010095 (2)ref|XP_009607571.1|120PREDICTED: uncharacterized protein LOC104101767 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048L06- GAAGTGGA
                      ____________________________________________________________
consensus GAAGTGGA
 
. : . : . : . : . : . :
JMSF048L06- GGGAAAAGTTAGATGAGCAGCAACAGGCCAACAGCCATGTCTTTCTCTGAGCAGGCAGTC
rJMSF048L06+ GGGAAAAGTTAGATGAGCAGCAACAGGCCAACAGCCATGTCTTTCTCTGAGCAGGCAGTC
                      ____________________________________________________________
consensus GGGAAAAGTTAGATGAGCAGCAACAGGCCAACAGCCATGTCTTTCTCTGAGCAGGCAGTC
 
. : . : . : . : . : . :
JMSF048L06- CTTTCCTATCACCTCTGATCTACTCGATCTTCTACTTTGCCAAATCTCCATTATCAATTC
rJMSF048L06+ CTTTCCTATCACCTCTGATCTACTCGATCTTCTACTTTGCCAAATCTCCATTATCAATTC
                      ____________________________________________________________
consensus CTTTCCTATCACCTCTGATCTACTCGATCTTCTACTTTGCCAAATCTCCATTATCAATTC
 
. : . : . : . : . : . :
JMSF048L06- TCAGCTTGCAGCCATGGCTAGGATTACTCCAACTCATCTAACCCTCCATAACAATCTTTC
rJMSF048L06+ TCAGCTTGCAGCCATGGCTAGGATTACTCCAACTCATCTAACCCTCCATAACAATCTTTC
                      ____________________________________________________________
consensus TCAGCTTGCAGCCATGGCTAGGATTACTCCAACTCATCTAACCCTCCATAACAATCTTTC
 
. : . : . : . : . : . :
JMSF048L06- CTTCTTGCCATTTTCACCCACGGCCACACTTTTCATCACCATTTTAGCAATCTTGGCTGT
rJMSF048L06+ CTTCTTGCCATTTTCACCCACGGCCACACTTTTCATCACCATTTTAGCAATCTTGGCTGT
                      ____________________________________________________________
consensus CTTCTTGCCATTTTCACCCACGGCCACACTTTTCATCACCATTTTAGCAATCTTGGCTGT
 
. : . : . : . : . : . :
JMSF048L06- GCTCTCAACTGTAGTCTTCTTATGCGGCGCTCACCGAGCAATATTCACATCAACTAGAGG
rJMSF048L06+ GCTCTCAACTGTAGTCTTCTTATGCGGCGCTCACCGAGCAATATTCACATCAACTAGAGG
                      ____________________________________________________________
consensus GCTCTCAACTGTAGTCTTCTTATGCGGCGCTCACCGAGCAATATTCACATCAACTAGAGG
 
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JMSF048L06- CAATAACGTTGAGAAGAAGAAGAAGAAGAAGAACTGTGTGCGGCTGGGTGGCAAAAATCC
rJMSF048L06+ CAATAACGTTGAGAAGAAGAAGAAGAAGAAGAACTGTGTGCGGCTGGGTGGCAAAAATCC
                      ____________________________________________________________
consensus CAATAACGTTGAGAAGAAGAAGAAGAAGAAGAACTGTGTGCGGCTGGGTGGCAAAAATCC
 
. : . : . : . : . : . :
JMSF048L06- GGCGGGGCTTCATAGCAGTAAGGCACTGTTGATGGCGAAACTGATATCTTGGAGGAAAGT
rJMSF048L06+ GGCGGGGCTTCATAGCAGTAAGGCACTGTTGATGGCGAAACTGATATCTTGGAGGAAAGT
                      ____________________________________________________________
consensus GGCGGGGCTTCATAGCAGTAAGGCACTGTTGATGGCGAAACTGATATCTTGGAGGAAAGT
 
. : . : . : . : . : . :
JMSF048L06- CCAGTATGAAGAAGAAGAAGAGGAAGATGAAGATGATTGTAGTGATGGTGATGAGCAACC
rJMSF048L06+ CCAGTATGAAGAAGAAGAAGAGGAAGATGAAGATGATTGTAGTGATGGTGATGAGCAACC
                      ____________________________________________________________
consensus CCAGTATGAAGAAGAAGAAGAGGAAGATGAAGATGATTGTAGTGATGGTGATGAGCAACC
 
. : . : . : . : . : . :
JMSF048L06- GATATGGAAGAGGACTATCATTAAAGGCGAGAAATGCCGTCCGTTGGATTTTTCCGGCAA
rJMSF048L06+ GATATGGAAGAGGACTATCATTAAAGGCGAGAAATGCCGTCCGTTGGATTTTTCCGGCAA
                      ____________________________________________________________
consensus GATATGGAAGAGGACTATCATTAAAGGCGAGAAATGCCGTCCGTTGGATTTTTCCGGCAA
 
. : . : . : . : . : . :
JMSF048L06- GATTTTGTATGATTCCAATGGAAACATGATTGCAGCAGACTGATCGAAGAACATATTCAA
rJMSF048L06+ GATTTTGTATGATTCCAATGGAAACATGATTGCAGCAGACTGATCGAAGAACATATTCAA
                      ____________________________________________________________
consensus GATTTTGTATGATTCCAATGGAAACATGATTGCAGCAGACTGATCGAAGAACATATTCAA
 
. : . : . : . : . : . :
JMSF048L06- GTTCAACAACTACTTCCTTTCTTTAGTCTCTTGATTTGTTTCTAATTGTTTCTGATACAG
rJMSF048L06+ GTTCAACAACTACTTCCTTTCTTTAGTCTCTTGATTTGTTTCTAATTGTTTCTGATACAG
                      ____________________________________________________________
consensus GTTCAACAACTACTTCCTTTCTTTAGTCTCTTGATTTGTTTCTAATTGTTTCTGATACAG
 
. : . : . : . : . : . :
JMSF048L06- TATGTATAACTTGATGACGAT
rJMSF048L06+ TATGTATAACTTGATGACGATGATTTCATTTATTTTGTGTTTGGAATTTCTTGTTTGGGT
                      ____________________________________________________________
consensus TATGTATAACTTGATGACGATGATTTCATTTATTTTGTGTTTGGAATTTCTTGTTTGGGT
 
. : . : . : . : . : . :
rJMSF048L06+ GCAATGCTGCGCTAAGCCATTTGTGGTTGCTACATCTTCTGACCGTGTAGATGAAGTAAA
                      ____________________________________________________________
consensus GCAATGCTGCGCTAAGCCATTTGTGGTTGCTACATCTTCTGACCGTGTAGATGAAGTAAA