Contig 010083:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008E09+                                                             AATGTAAGA
                      ____________________________________________________________
consensus                                                                AATGTAAGA
 
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rJMSF008E09+          CTGTAAGTTATCTTTTCACATTGATCTCTGATTGACTTTTGATGTCTTGATTTTGTTGTG
                      ____________________________________________________________
consensus             CTGTAAGTTATCTTTTCACATTGATCTCTGATTGACTTTTGATGTCTTGATTTTGTTGTG
 
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rJMSF008E09+          AAAGTGCTGTTGTTCTTTTCAGAATATAGACAAACTACAAGAAGTCGACAGCCCAGTTTT
                      ____________________________________________________________
consensus             AAAGTGCTGTTGTTCTTTTCAGAATATAGACAAACTACAAGAAGTCGACAGCCCAGTTTT
 
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rJMSF008E09+          AATTATCCATGTAAGAAACATCTCTTTCCTCAATTTTATATATATTTTGTTACATTTGTG
rJMSF045H23+                                          ATTTTATATATATTTTGTTACATTTGTG
                      ____________________________________________________________
consensus             AATTATCCATGTAAGAAACATCTCTTTCCTCAATTTTATATATATTTTGTTACATTTGTG
 
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rJMSF008E09+          ATGATTTTTTTCCTCGCTCCCTAGTTATTTACATATAGCCTGCCAAGAACACAATTAAAA
rJMSF045H23+          ATGATTTTTTTCCTCGCTCCCTAGTTATTTACATATAGCCTGCCAAGAACACAATTAAAA
                      ____________________________________________________________
consensus             ATGATTTTTTTCCTCGCTCCCTAGTTATTTACATATAGCCTGCCAAGAACACAATTAAAA
 
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rJMSF008E09+          ACTACAAAAATCATGAAAGGAAAAGCATCACAACTTATGGTTTGAGTCATTTGACTAATA
rJMSF045H23+          ACTACAAAAATCATGAAAGGAAAAGCATCACAACTTATGGTTTGAGTCATTTGACTAATA
                      ____________________________________________________________
consensus             ACTACAAAAATCATGAAAGGAAAAGCATCACAACTTATGGTTTGAGTCATTTGACTAATA
 
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rJMSF008E09+          GAGAGTAAATGAAATGGGAGATTTAGTAAACAGAGTTGGTGATAAAGGTAGGATTCTGGG
rJMSF045H23+          GAGAGTAAATGAAATGGGAGATTTAGTAAACAGAGTTGGTGATAAAGGTAGGATTCTGGG
                      ____________________________________________________________
consensus             GAGAGTAAATGAAATGGGAGATTTAGTAAACAGAGTTGGTGATAAAGGTAGGATTCTGGG
 
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rJMSF008E09+          ATGGCAGTTGCTGCGATGTTACCTAACAACACCTGACGTTTTTGACCTATTGACTAGTGT
rJMSF045H23+          ATGGCAGTTGCTGCGATGTTACCTAACAACACCTGACGTTTTTGACCTATTGACTAGTGT
                      ____________________________________________________________
consensus             ATGGCAGTTGCTGCGATGTTACCTAACAACACCTGACGTTTTTGACCTATTGACTAGTGT
 
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rJMSF008E09+          AAGGACAATGTAGTATCCAGTCATATGATCTTAGTTCTTGAGCCGATTCTTTACTGTCAA
rJMSF045H23+          AAGGACAATGTAGTATCCAGTCATATGATCTTAGTTCTTGAGCCGATTCTTTACTGTCAA
                      ____________________________________________________________
consensus             AAGGACAATGTAGTATCCAGTCATATGATCTTAGTTCTTGAGCCGATTCTTTACTGTCAA
 
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rJMSF008E09+          GAAGAAGACATGTGCGGGTTACTAATTTGGATCAAGGTTGCTGAAGAAGAAAGCGAAGGT
rJMSF045H23+          GAAGAAGACATGTGCGGGTTACTAATTTGGATCAAGGTTGCTGAAGAAGAAAGCGAAGGT
                      ____________________________________________________________
consensus             GAAGAAGACATGTGCGGGTTACTAATTTGGATCAAGGTTGCTGAAGAAGAAAGCGAAGGT
 
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rJMSF008E09+          TGTGAAAGCATCTTGATTCATTAGTCATCTCAGTTGTATGCCCCTCCAACTGCTAAATCG
rJMSF045H23+          TGTGAAAGCATCTTGATTCATTAGTCATCTCAGTTGTATGCCCCTCCAACTGCTAAATCG
                      ____________________________________________________________
consensus             TGTGAAAGCATCTTGATTCATTAGTCATCTCAGTTGTATGCCCCTCCAACTGCTAAATCG
 
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rJMSF008E09+          ATTCGAAGACATTATAAGCAATGTTTGAGCTTTGTCTGAATGATTTAGTGCATTGGTTCT
rJMSF045H23+          ATTCGAAGACATTATAAGCAATGTTTGAGCTTTGTCTGAATGATTTAGTGCATTGGTTCT
                      ____________________________________________________________
consensus             ATTCGAAGACATTATAAGCAATGTTTGAGCTTTGTCTGAATGATTTAGTGCATTGGTTCT
 
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rJMSF008E09+          CATTATCCATCTTGATCAAGTGTACCAATTAAATGTAGGTAATATTATGTTGTATGATGT
rJMSF045H23+          CATTATCCATCTTGATCAAGTGTACCAATTAAATGTAGGTAATATTATGTTGTATGATGT
                      ____________________________________________________________
consensus             CATTATCCATCTTGATCAAGTGTACCAATTAAATGTAGGTAATATTATGTTGTATGATGT
 
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rJMSF008E09+          GTCCCAATCCCCACAAATCTTTCTAGTTGTC                             
rJMSF045H23+          GTCCCAATCCCCACAAATCTTTCTAGTTGTCCTTTAANCTTTGGAAACTTTGTATACCAT
                      ____________________________________________________________
consensus             GTCCCAATCCCCACAAATCTTTCTAGTTGTCCTTTAANCTTTGGAAACTTTGTATACCAT