Contig 010068:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001L20Sequence217010068 (4)
JMSF002E04Sequence344016669gb|EYU33195.1|4e-61hypothetical protein MIMGU_mgv1a002911mg [Erythranthe guttata]714010068 (4)ref|XP_009764849.1|7e-55PREDICTED: ankyrin repeat-containing protein At3g12360-like [Nicotiana sylvestr
JMSF034G01Sequence730002343 (2)ref|XP_009600985.1|1e-82PREDICTED: ankyrin repeat-containing protein At3g12360-like [Nicotiana tomentos755010068 (4)ref|XP_009600985.1|1e-52PREDICTED: ankyrin repeat-containing protein At3g12360-like [Nicotiana tomentos
JMSF043A14Sequence485002343 (2)ref|XP_004239763.1|2e-40PREDICTED: ankyrin repeat-containing protein At3g12360 [Solanum lycopersicum]637010068 (4)emb|CDP21519.1|3e-17unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002E04+ GGCGAGACAAAGGCTGAAAGGAGAGTGATAGAGATTATAANCAAGTTGAT
rJMSF034G01+ GGCTGAAAGGAGAGTGATAGAGATTATAAACAAGTTGAT
                      ____________________________________________________________
consensus GGCGAGACAAAGGCTGAAAGGAGAGTGATAGAGATTATAAACAAGTTGAT
 
. : . : . : . : . : . :
rJMSF002E04+ GTGGCTGGCTTCTGTGTGTACTTCAGTAGCATTCATGGCCTCGTCTTATATAGTGGTTGG
rJMSF034G01+ GTGGCTGGCTTCTGTGTGTACTTCAGTAGCATTCATGGCCTCGTCTTATATAGTGGTTGG
                      ____________________________________________________________
consensus GTGGCTGGCTTCTGTGTGTACTTCAGTAGCATTCATGGCCTCGTCTTATATAGTGGTTGG
 
. : . : . : . : . : . :
rJMSF002E04+ GCGCAAATTTGAGTGGGCTGCTATCTTGGTTACGGTTGTAGGTGGCAGTATAATGG-CCG
rJMSF034G01+ GCGCAAATTTGAGTGGGCTGCTATCTTGGTTACGGTTGTAGGTGGCAGTATAATGG-CCG
rJMSF043A14+ GGTTACGGTTGTAGGTGGCAGTATAATGGCCCG
                      ____________________________________________________________
consensus GCGCAAATTTGAGTGGGCTGCTATCTTGGTTACGGTTGTAGGTGGCAGTATAATGG-CCG
 
. : . : . : . : . : . :
rJMSF002E04+ GGGTTCTTGGAACCATGACATATTATGTTGTGAGGTCTAGGAGAATCAGGTCGACGAGGA
rJMSF034G01+ GGGTTCTTGGAACCATGACATATTATGTTGTGAGGTCTAGGAGAATCAGGTCGACGAGGA
rJMSF043A14+ GGGTTCTTGGAACCATGACATATTATGTTGTGAGGTCTAGGAGAATCAGGTCGACGAGGA
                      ____________________________________________________________
consensus GGGTTCTTGGAACCATGACATATTATGTTGTGAGGTCTAGGAGAATCAGGTCGACGAGGA
 
. : . : . : . : . : . :
rJMSF001L20+ TCTAACT
rJMSF002E04+ AAAAAGAGAAGCACGCAAGGAGTGGCTCCAACTCATGGCTTCCCTCTGAGTTGTCTAACT
rJMSF034G01+ AAAAAGAGAAGCACGCAAGGAGTGGCTCCAACTCATGGCTTCCCTCTGAGTTGTCTAACT
rJMSF043A14+ AAAAAGAGAAGCACGCAAGGAGTGGCTCCAACTCATGGCTTCCCTCTGAGTTGTCTAACT
                      ____________________________________________________________
consensus AAAAAGAGAAGCACGCAAGGAGTGGCTCCAACTCATGGCTTCCCTCTGAGTTGTCTAACT
 
. : . : . : . : . : . :
rJMSF001L20+ CAGATATNGACAGGATTTACGCCATCTGATNTGNGAAGCTCAAGANGAAGAGGGACTTAT
rJMSF002E04+ CAGATATTGACAGGATTTATGCCATCTGATCTGAGAAGCTCAAGATGAAGAGGGACTTAT
rJMSF034G01+ CAGATATTGACAGGATTTATGCCATCTGATCTGAGAAGCTCAAGATGAAGAGGGACTTAT
rJMSF043A14+ CAGATATTGACAGGATTTATGCCATCTGATCTGAGAAGCTCAAGATGAAGAGGGACTTAT
                      ____________________________________________________________
consensus CAGATATTGACAGGATTTATGCCATCTGATCTGAGAAGCTCAAGATGAAGAGGGACTTAT
 
. : . : . : . : . : . :
rJMSF001L20+ TGGCAACAATTGAAGTAAAATCATAGGAATTTAAGAATGTGTTCNGTCTCANNTAAAAGT
rJMSF002E04+ TGGCAACAATTGAAGTAAAATCATAGGAATTTAAGAATGTGTTCTGTCTCAACTAAAAGT
rJMSF034G01+ TGGCAACAATTGAAGTAAAATCATAGGAATTTAAGAATGTGTTCTGTCTCAACTAAAAGT
rJMSF043A14+ TGGCAACAATTGAAGTAAAATCATAGGAATTTAAGAATGTGTTCTGTCTCAACTAAAAGT
                      ____________________________________________________________
consensus TGGCAACAATTGAAGTAAAATCATAGGAATTTAAGAATGTGTTCTGTCTCAACTAAAAGT
 
. : . : . : . : . : . :
rJMSF001L20+ NTTNACTGTTAGNGAGGNTNCACANNTATNTNTNATATATNATATGCTCGAANATAGAGA
rJMSF002E04+ CTTAACTGTTAGTGAGGCTACACATTTATATTTTATATATTATATGCTCGAAAATAGAGA
rJMSF034G01+ CTTAACTGTTAGTGAGGCTACACATTTATATTTTATATATTATATGCTCGAAAATAGAGA
rJMSF043A14+ CTTAACTGTTAGTGAGGCTACACATTTATATTTTATATATTATATGCTCGAAAATAGAGA
                      ____________________________________________________________
consensus CTTAACTGTTAGTGAGGCTACACATTTATATTTTATATATTATATGCTCGAAAATAGAGA
 
. : . : . : . : . : . :
rJMSF001L20+ GGGAAACATGAAGGATCCACC
rJMSF002E04+ GGGAAACATGAAGGATCCACCCTCCTCCTCGGCTTTTCTGATCAATTAGCCCATAACATG
rJMSF034G01+ GGGAAACATGAAGGATCCACCCTCCTCCTCGGCTTTTCTGATCAATTAGCCCATAACATG
rJMSF043A14+ GGGAAACATGAAGGATCCACCCTCCTCCTCGGCTTTTCTGATCAATTAGCCCATAACATG
                      ____________________________________________________________
consensus GGGAAACATGAAGGATCCACCCTCCTCCTCGGCTTTTCTGATCAATTAGCCCATAACATG
 
. : . : . : . : . : . :
rJMSF002E04+ TTTAGCGGCTTCCTGTTTGGTGGAATGGAGGAGATGATCAGTTGTTGCTTTCTGTTAACT
rJMSF034G01+ TTTAGCGGCTTCCTGTTTGGTGGAATGGAGGAGATGATCAGTTGTTGCTTTCTGTTAACT
rJMSF043A14+ TTTAGCGGCTTCCTGTTTGGTGGAATGGAGGAGATGATCAGTTGTTGCTTTCTGTTAACT
                      ____________________________________________________________
consensus TTTAGCGGCTTCCTGTTTGGTGGAATGGAGGAGATGATCAGTTGTTGCTTTCTGTTAACT
 
. : . : . : . : . : . :
rJMSF002E04+ CTTCTAATTTCAGAGGATTTCCTTGAGAACCTGCACCCAGGAGGCAGGAATGAAACATAT
rJMSF034G01+ CTTCTAATTTCAGAGGATTTCCTTGAGAACCTGCACCCAGGAGGCAGGAATGAAACATAT
rJMSF043A14+ CTTCTAATTTCAGAGGATTTCCTTGAGAACCTGCACCCAGGAGGCAGGAATGAAACATAT
                      ____________________________________________________________
consensus CTTCTAATTTCAGAGGATTTCCTTGAGAACCTGCACCCAGGAGGCAGGAATGAAACATAT
 
. : . : . : . : . : . :
rJMSF002E04+ TGTCAGATTAGCTAATATTTACTGTCAAGTTACAGACTTGGAAAATATGTATATTTTGTT
rJMSF034G01+ TGTCAGATTAGCTAATATTTACTGTCAAGTTACAGACTTGGAAAATATGTATATTTTGTT
rJMSF043A14+ TGTCAGATTAGCTAATATTTACTGTCAAGTTACAGACTTGGAAAATATGTATATTTTGTT
                      ____________________________________________________________
consensus TGTCAGATTAGCTAATATTTACTGTCAAGTTACAGACTTGGAAAATATGTATATTTTGTT
 
. : . : . : . : . : . :
rJMSF034G01+ TGAAATCATGGTCTCATGAATGCAATTCTACCTT
rJMSF043A14+ TGAAATCATGGTCTCATGAATGCAATTCTACCTTTGAAATGAGGATTGTGTAAAAATGCA
                      ____________________________________________________________
consensus TGAAATCATGGTCTCATGAATGCAATTCTACCTTTGAAATGAGGATTGTGTAAAAATGCA