Contig 010060:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005B21Sequence429010060 (9)emb|CDP03765.1|1e-79unnamed protein product [Coffea canephora]571010060 (9)ref|XP_008235643.1|1e-82PREDICTED: 60S ribosomal protein L14-1 [Prunus mume]
JMFF014D11Sequence571010060 (9)ref|XP_008235643.1|9e-83PREDICTED: 60S ribosomal protein L14-1 [Prunus mume]571010060 (9)ref|XP_008235643.1|9e-83PREDICTED: 60S ribosomal protein L14-1 [Prunus mume]
JMFF040E16Sequence571010060 (9)ref|XP_008235643.1|9e-83PREDICTED: 60S ribosomal protein L14-1 [Prunus mume]601010060 (9)emb|CDP03765.1|1e-59unnamed protein product [Coffea canephora]
JMFN009K16Sequence588010060 (9)ref|XP_008235643.1|1e-82PREDICTED: 60S ribosomal protein L14-1 [Prunus mume]
JMFN044F21Sequence576010060 (9)ref|XP_008235643.1|2e-82PREDICTED: 60S ribosomal protein L14-1 [Prunus mume]
JMSF041L21Sequence561010060 (9)ref|XP_004953139.1|9e-57PREDICTED: 60S ribosomal protein L14-1-like isoform X2 [Setaria italica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF040E16+ GTAATGAAAAAGGCGAAGTCTTTGCTTTAGGGACAAAA
JMFF014D11+ GTAATGAAAAAGGCGAAGTCTTTGCTTTAGGGACAAAA
rJMFF005B21- GTAATGAAAAAGGCGAAGTCTTTGCTTTAGGGACAAAA
rJMFF014D11- GTAATGAAAAAGGCGAAGTCTTTGCTTTAGGGACAAAA
rJMSF041L21- AGTCTTTGCTTTAGGGACAAAA
                      ____________________________________________________________
consensus GTAATGAAAAAGGCGAAGTCTTTGCTTTAGGGACAAAA
 
. : . : . : . : . : . :
JMFF040E16+ ATTAAAATTTCCAAATAAACAACACAAACTCAAAGCTTAGTGTAGCTAAGATCTCTCTCT
JMFF014D11+ ATTAAAATTTCCAAATAAACAACACAAACTCAAAGCTTAGTGTAGCTAAGATCTCTCTCT
rJMFF005B21- ATTAAAATTTCCAAATAAACAACACAAACTCAAAGCTTAGTGTAGCTAAGATCTCTCTCT
rJMFF014D11- ATTAAAATTTCCAAATAAACAACACAAACTCAAAGCTTAGTGTAGCTAAGATCTCTCTCT
rJMSF041L21- ATTAAAATTTCCAAATAAACAACACAAACTCAAAGCTTAGTGTAGCTAAGATCTCTCTCT
                      ____________________________________________________________
consensus ATTAAAATTTCCAAATAAACAACACAAACTCAAAGCTTAGTGTAGCTAAGATCTCTCTCT
 
. : . : . : . : . : . :
JMFF040E16+ ATCAAAAGTCTGGGTTATCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
JMFF014D11+ ATCAAAAGTCTGGGTTATCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
rJMFF005B21- ATCAAAAGTCTGGGTTATCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
JMFN009K16+ TCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
JMFN044F21+ TCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
rJMFF040E16- TCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
JMFF005B21+ GGCAAGCTCCTGTCTC
rJMFF014D11- ATCAAAAGTCTGGGTTATCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
rJMSF041L21- ATCAAAAGTCTGGGTTATCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
                      ____________________________________________________________
consensus ATCAAAAGTCTGGGTTATCAGGCAGTGCTCTCCTTCTTAAGCTTGGCAAGCTCCTGTCTC
 
. : . : . : . : . : . :
JMFF040E16+ ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
JMFF014D11+ ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
rJMFF005B21- ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
JMFN009K16+ ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
JMFN044F21+ ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
rJMFF040E16- ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
JMFF005B21+ ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
rJMFF014D11- ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
rJMSF041L21- ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
                      ____________________________________________________________
consensus ACAACTCCAGCTTTCTTGATTTTTGCCAGCATAATCTTAAACCTGTCAAAGTCATTGAGG
 
. : . : . : . : . : . :
JMFF040E16+ CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
JMFF014D11+ CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
rJMFF005B21- CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
JMFN009K16+ CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
JMFN044F21+ CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
rJMFF040E16- CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
JMFF005B21+ CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
rJMFF014D11- CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
rJMSF041L21- CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
                      ____________________________________________________________
consensus CCAGCCCTCCTCTTTTGCACGATCAACTTCCTCCCCCATGAGCTGTTCTCCCACTTGCTC
 
. : . : . : . : . : . :
JMFF040E16+ TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
JMFF014D11+ TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
rJMFF005B21- TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
JMFN009K16+ TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
JMFN044F21+ TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
rJMFF040E16- TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
JMFF005B21+ TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
rJMFF014D11- TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
rJMSF041L21- TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTCTTTTTTTGGCACTCTTTTAAT
                      ____________________________________________________________
consensus TTCACATCAGCAGCCTCCATAGCAGCGATCAAAGTCTTC-TTTTTCGGCACTCTTTTAAT
 
. : . : . : . : . : . :
JMFF040E16+ GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
JMFF014D11+ GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
rJMFF005B21- GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
JMFN009K16+ GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
JMFN044F21+ GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
rJMFF040E16- GTCAATGGTGATGTCTAGTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
JMFF005B21+ GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
rJMFF014D11- GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
rJMSF041L21- GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
                      ____________________________________________________________
consensus GTCAATGGTGATGTCT-GTGAGTGTAAGCCTCTTAAAGTTCATTTGGCTCCTAACCATGT
 
. : . : . : . : . : . :
JMFF040E16+ CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
JMFF014D11+ CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
rJMFF005B21- CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
JMFN009K16+ CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
JMFN044F21+ CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
rJMFF040E16- CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
JMFF005B21+ CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
rJMFF014D11- CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
rJMSF041L21- CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
                      ____________________________________________________________
consensus CTGGAGCATCAACAAGGGCCCTGTTCTGATCGATAACATCGACAATGACGACAAGCTTGC
 
. : . : . : . : . : . :
JMFF040E16+ CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
JMFF014D11+ CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
rJMFF005B21- CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
JMFN009K16+ CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
JMFN044F21+ CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
rJMFF040E16- CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
JMFF005B21+ CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
rJMFF014D11- CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
rJMSF041L21- CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
                      ____________________________________________________________
consensus CATAGTCCTTTCCGTAGTTGACAAGGGCAACCCTCCCGATCTCCACGTACCTCTTGAACG
 
. : . : . : . : . : . :
JMFF040E16+ GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGAGGCC
JMFF014D11+ GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGAGGCC
rJMFF005B21- GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGA
JMFN009K16+ GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAG
JMFN044F21+ GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTT
rJMFF040E16- GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGAGGCC
JMFF005B21+ GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGA
rJMFF014D11- GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGAGGCC
rJMSF041L21- GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGAGGCCGAAGC
                      ____________________________________________________________
consensus GCATTTTTGGCAATCCGAATGAGCAGAACGGGGCGATGCAGGTTGAGCTGAGGCCGAAGC