Contig 010053:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021N20Sequence673005072 (4)727010053 (4)ref|XP_011085020.1|6e-60PREDICTED: scarecrow-like protein 14 [Sesamum indicum] ref|XP_011085021.1| PREDI
JMSF040F02Sequence843010053 (4)ref|XP_011085020.1|4e-69PREDICTED: scarecrow-like protein 14 [Sesamum indicum] ref|XP_011085021.1| PREDI
JMSF040G02Sequence652005072 (4)852010053 (4)ref|XP_011085020.1|1e-74PREDICTED: scarecrow-like protein 14 [Sesamum indicum] ref|XP_011085021.1| PREDI
JMSF050H04Sequence682005072 (4)743010053 (4)ref|XP_011085020.1|2e-60PREDICTED: scarecrow-like protein 14 [Sesamum indicum] ref|XP_011085021.1| PREDI

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040G02+ GTGGTTGTGAACAG
                      ____________________________________________________________
consensus GTGGTTGTGAACAG
 
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rJMSF040G02+ TCCGAGAGATATTGTTTTGGAAGCTCATCCGGGAGTTGAATCCACACGTTTTTATACA-G
rJMSF040F02+ TTTGGAAGCTCATCCGGGAGTTGAATCCACACGTTTTTATACAGG
                      ____________________________________________________________
consensus TCCGAGAGATATTGTTTTGGAAGCTCATCCGGGAGTTGAATCCACACGTTTTTATACAGG
 
. : . : . : . : . : . :
rJMSF040G02+ GGGATTGTCAACGGTGCTTATAATTCCCCCTTCTTTATCACGCGGTTTCGAGAGGCTTTA
rJMSF050H04+ TCACGCGGTTTCGAGAGGCTTTA
rJMSF021N20+ TCACGCGGTTTCGAGAGGCTTTA
rJMSF040F02+ GGGATTGTCAACGGTGCTTATAATTCCCCCTTCTTTATCACGCGGTTTCGAGAGGCTTTA
                      ____________________________________________________________
consensus GGGATTGTCAACGGTGCTTATAATTCCCCCTTCTTTATCACGCGGTTTCGAGAGGCTTTA
 
. : . : . : . : . : . :
rJMSF040G02+ TTTCATTTCTCGTCTTTGTTTGACATGCTCGACACTAATGTTCCCCGCAATATCCACGAG
rJMSF050H04+ TTTCATTTCTCGTCNTTGTTTGACATGCTCGACACTAATGTTCCCCGCAATATCCACGAG
rJMSF021N20+ TTTCATTTCTCGTCTTTGTTTGACATGCTCGACACTAATGTTCCCCGCAATATCCACGAG
rJMSF040F02+ TTTCATTTCTCGTCTTTGTTTGACATGCTCGACACTAATGTTCCCCGCAATATCCACGAG
                      ____________________________________________________________
consensus TTTCATTTCTCGTCTTTGTTTGACATGCTCGACACTAATGTTCCCCGCAATATCCACGAG
 
. : . : . : . : . : . :
rJMSF040G02+ AGGATACTGATTGAGAAGACGATATTTGGGCAGGAAGCAAAGAACGTTATTGCGTGTGAA
rJMSF050H04+ AGGATACTGATTGAGAAGACGATATTTGGGCAGGAAGCAAAGAACGTTATTGCGTGTGAA
rJMSF021N20+ AGGATACTGATTGAGAAGACGATATTTGGGCAGGAAGCAAAGAACGTTATTGCGTGTGAA
rJMSF040F02+ AGGATACTGATTGAGAAGACGATATTTGGGCAGGAAGCAAAGAACGTTATTGCGTGTGAA
                      ____________________________________________________________
consensus AGGATACTGATTGAGAAGACGATATTTGGGCAGGAAGCAAAGAACGTTATTGCGTGTGAA
 
. : . : . : . : . : . :
rJMSF040G02+ ACCGCGGAGAGGGTCGAGAGGCCCGAGACATACAAGCAATGGCACGTTAGGAACATGCGG
rJMSF050H04+ ACCGCGGAGAGGGTCGAGAGGCCCGAGACATACAAGCAATGGCACGTTAGGAACATGCGG
rJMSF021N20+ ACCGCGGAGAGGGTCGAGAGGCCCGAGACATACAAGCAATGGCACGTTAGGAACATGCGG
rJMSF040F02+ ACCGCGGAGAGGGTCGAGAGGCCCGAGACATACAAGCAATGGCACGTTAGGAACATGCGG
                      ____________________________________________________________
consensus ACCGCGGAGAGGGTCGAGAGGCCCGAGACATACAAGCAATGGCACGTTAGGAACATGCGG
 
. : . : . : . : . : . :
rJMSF040G02+ GCGGGATTTCTTCCACTTCCTTTGAACAAGGAGATCATGAAGATGTCCAGAGACCGGGCC
rJMSF050H04+ GCGGGATTTCTTCCACTTCCTTTGAACAAGGAGATCATGAAGATGTCCAGAGACCGGGCC
rJMSF021N20+ GCGGGATTTCTTCCACTTCCTTTGAACAAGGAGATCATGAAGATGTCCAGAGACCGGGCC
rJMSF040F02+ GCGGGATTTCTTCCACTTCCTTTGAACAAGGAGATCATGAAGATGTCCAGAGACCGGGCC
                      ____________________________________________________________
consensus GCGGGATTTCTTCCACTTCCTTTGAACAAGGAGATCATGAAGATGTCCAGAGACCGGGCC
 
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rJMSF040G02+ AAGGTATACAACAAGGATTTTGTAATTGATGAAGACGGGGAATGGCTTCTTCAAGGATGG
rJMSF050H04+ AAGGTATACAACAAGGATTTTGTAATTGATGAAGACGGGGAATGGCTTCTTCAAGGATGG
rJMSF021N20+ AAGGTATACAACAAGGATTTTGTAATTGATGAAGACGGGGAATGGCTTCTTCAAGGATGG
rJMSF040F02+ AAGGTATACAACAAGGATTTTGTAATTGATGAAGACGGGGAATGGCTTCTTCAAGGATGG
                      ____________________________________________________________
consensus AAGGTATACAACAAGGATTTTGTAATTGATGAAGACGGGGAATGGCTTCTTCAAGGATGG
 
. : . : . : . : . : . :
rJMSF040G02+ AAGGGACGCATTGTCTATGCACTTTCCTCCTGGAGATCCGCTTCTTGATTTTGCTTAAGA
rJMSF050H04+ AAGGGACGCATTGTCTATGCACTTTCCTCCTGGAGATCCGCTTCTTGATTTTGCTTAAGA
rJMSF021N20+ AAGGGACGCATTGTCTATGCACTTTCCTCCTGGAGATCCGCTTCTTGATTTTGCTTAAGA
rJMSF040F02+ AAGGGACGCATTGTCTATGCACTTTCCTCCTGGAGATCCGCTTCTTGATTTTGCTTAAGA
                      ____________________________________________________________
consensus AAGGGACGCATTGTCTATGCACTTTCCTCCTGGAGATCCGCTTCTTGATTTTGCTTAAGA
 
. : . : . : . : . : . :
rJMSF040G02+ TCGTCGTTCTATCTATCAACAAGAAGCATGCAAGCTCGACTAAGCTCATCTCTTCTTTTG
rJMSF050H04+ TCGTCGTTCTATCTATCAACAAGAAGCATGCAAGCTCGACTAAGCTCATCTCTTCTTTTG
rJMSF021N20+ TCGTCGTTCTATCTATCAACAAGAAGCATGCAAGCTCGACTAAGCTCATCTCTTCTTTTG
rJMSF040F02+ TCGTCGTTCTATCTATCAACAAGAAGCATGCAAGCTCGACTAAGCTCATCTCTTCTTTTG
                      ____________________________________________________________
consensus TCGTCGTTCTATCTATCAACAAGAAGCATGCAAGCTCGACTAAGCTCATCTCTTCTTTTG
 
. : . : . : . : . : . :
rJMSF040G02+ CAAGCTGAGGTGGCTAAGTGGATGCATAGATTGGTCATTTGGAAGTGCATCAACGACAAA
rJMSF050H04+ CAAGCTGAGGTGGCTAAGTGGATGCATAGATTGGTCATTTGGAAGTGCATCAACGACAAA
rJMSF021N20+ CAAGCTGAGGTGGCTAAGTGGATGCATAGATTGGTCATTTGGAAGTGCATCAACGACAAA
rJMSF040F02+ CAAGCTGAGGTGGCTAAGTGGATGCATAGATTGGTCATTTGGAAGTGCATCAACGACAAA
                      ____________________________________________________________
consensus CAAGCTGAGGTGGCTAAGTGGATGCATAGATTGGTCATTTGGAAGTGCATCAACGACAAA
 
. : . : . : . : . : . :
rJMSF040G02+ GACAACCAACCATCCACCCAAATATACGCACACCAGAAACAGAACCTAAACAGTCGCAAG
rJMSF050H04+ GACAACCAACCATCCACCCAAATATACGCACACCAGAAACAGAACCTAAACAGTCGCAAG
rJMSF021N20+ GACAACCAACCATCCACCCAAATATACGCACACCAGAAACAGAACCTAAACAGTCGCAAG
rJMSF040F02+ GACAACCAACCATCCACCCAAATATACGCACACCAGAAACAGAACCTAAACAGTCGCAAG
                      ____________________________________________________________
consensus GACAACCAACCATCCACCCAAATATACGCACACCAGAAACAGAACCTAAACAGTCGCAAG
 
. : . : . : . : . : . :
rJMSF040G02+ TATAGGAATTTGCATTGCATGTTTACATCTGTAAATACTTGCGACTTTTGCCAATGATAT
rJMSF050H04+ TATAGGAATTTGCATTGCATGTTTACATCTGTAAATACTTGCGACTTTTGCCAATGATAT
rJMSF021N20+ TATAGGAATTTGCATTGCATGTTTACATCTGTAAATACTTGCGACTTTTGCCAATGATAT
rJMSF040F02+ TATAGGAATTTGCATTGCATGTTTACATCTGTAAATACTTGCGACTTTTGCCAATGATAT
                      ____________________________________________________________
consensus TATAGGAATTTGCATTGCATGTTTACATCTGTAAATACTTGCGACTTTTGCCAATGATAT
 
. : . : . : . : . : . :
rJMSF040G02+ TTTAGTTGTATGTAAATATGAACCTTTTGTCAAGAGCATATATATCCAGAATCAGATCAA
rJMSF050H04+ TTTAGTTGTATGTAAATATGAACCTTTTGTCAAGAGCATATATATCCAGAATCAGATCAA
rJMSF021N20+ TTTAGTTGTATGTAAATATGAACCTTTTGTCAAGAGCATATATATCCAGAATCAGATCAA
rJMSF040F02+ TTTAGTTGTATGTAAATATGAACCTTTTGTCAAGAGCATATATATCCAGAATCAGATCAA
                      ____________________________________________________________
consensus TTTAGTTGTATGTAAATATGAACCTTTTGTCAAGAGCATATATATCCAGAATCAGATCAA
 
. : . : . : . : . : . :
rJMSF040G02+ AGCTCTGAATGGGTTATATCTGGCCTTTAGGTATTGAATCTTGGTTGTTATAAAAAGTA
rJMSF050H04+ AGCTCTGAATGGGTTATATCTGGCCTTTAGGTATTGAATCTTGGTTGTTATAAAAAGTA
rJMSF021N20+ AGCTCTGAATGGGTTATATCTGGCCTTTAGGTATTGAATCT
rJMSF040F02+ AGCTCTGAATGGGTTATATCTGGCCTTTAGGTATTGAATCTTGGTTGTTATAAAAAGTAC
                      ____________________________________________________________
consensus AGCTCTGAATGGGTTATATCTGGCCTTTAGGTATTGAATCTTGGTTGTTATAAAAAGTAC