Contig 010037:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037D09Sequence629010037 (2)dbj|BAG55006.1|7e-127adenylate isopentenyltransferase [Ipomoea nil]781010037 (2)dbj|BAG55006.1|4e-137adenylate isopentenyltransferase [Ipomoea nil]

Alignment

This contig is upended


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JMSF037D09-                                             GTCAAATATATTCACCTCAAAGAGAA
                      ____________________________________________________________
consensus                                               GTCAAATATATTCACCTCAAAGAGAA
 
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JMSF037D09-           CACTTCCCATTCTTTGCAATTTTATGTGTCCATTTGTCGTGAAATATATAAATTGAGTGA
                      ____________________________________________________________
consensus             CACTTCCCATTCTTTGCAATTTTATGTGTCCATTTGTCGTGAAATATATAAATTGAGTGA
 
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JMSF037D09-           AACATTATGAGTATGAGATTTGCGCCGACATTTATGTGCAAACAAAAATTGCCTTTGCTG
                      ____________________________________________________________
consensus             AACATTATGAGTATGAGATTTGCGCCGACATTTATGTGCAAACAAAAATTGCCTTTGCTG
 
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JMSF037D09-           CACATGCCCAATGGCGGCGGGATTGACCTGAAAATTCTGCACCGCCCGCAGAAGGAGAAG
                      ____________________________________________________________
consensus             CACATGCCCAATGGCGGCGGGATTGACCTGAAAATTCTGCACCGCCCGCAGAAGGAGAAG
 
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JMSF037D09-           GTTGTGGTGGTGATGGGGGCGACCGGCGCCGGAAAGTCGAGACTCTCCGTCGACCTCGCA
                      ____________________________________________________________
consensus             GTTGTGGTGGTGATGGGGGCGACCGGCGCCGGAAAGTCGAGACTCTCCGTCGACCTCGCA
 
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JMSF037D09-           ACCCGATTCTCGGCGGAGATAGTGAACGCGGACAAAATGCAGGTGTACCAGGGATTTGAC
                      ____________________________________________________________
consensus             ACCCGATTCTCGGCGGAGATAGTGAACGCGGACAAAATGCAGGTGTACCAGGGATTTGAC
 
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JMSF037D09-           GTGCTCACTAACAAGGTCACCGACGAGGAAGCCGGCGGCGTACCGCACCATCTGCTAGGG
                      ____________________________________________________________
consensus             GTGCTCACTAACAAGGTCACCGACGAGGAAGCCGGCGGCGTACCGCACCATCTGCTAGGG
 
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JMSF037D09-           ATAATCGACCCCGAGAAGGATTTCACGGCGAAGAATTTCTGCAACGCGGCGTCGCGCTGC
                      ____________________________________________________________
consensus             ATAATCGACCCCGAGAAGGATTTCACGGCGAAGAATTTCTGCAACGCGGCGTCGCGCTGC
 
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JMSF037D09-           ATCAAGTCGATTGCCGGACGCGGGAGGCTCCCGATGATCGCCGGCGGGTCGAATTCGTTC
rJMSF037D09+                                GGAGGCTCCCGATGATCGCCGGCGGGTCGAATTCGTTC
                      ____________________________________________________________
consensus             ATCAAGTCGATTGCCGGACGCGGGAGGCTCCCGATGATCGCCGGCGGGTCGAATTCGTTC
 
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JMSF037D09-           ATTGAGGCGCTCGTTGAAGACGAGGATTCCAAGATGAAGTCGAAGTACGATTGGTGTTTT
rJMSF037D09+          ATTGAGGCGCTCGTTGAAGACGAGGATTCCAAGATGAAGTCGAAGTACGATTGGTGTTTT
                      ____________________________________________________________
consensus             ATTGAGGCGCTCGTTGAAGACGAGGATTCCAAGATGAAGTCGAAGTACGATTGGTGTTTT
 
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JMSF037D09-           ATCTGCGTCGACGTTGCGCTGCCGGTTCTGCATTCGTTCGTGTCGGANCGGGTTGATCGG
rJMSF037D09+          ATCTGCGTCGACGTTGCGCTGCCGGTTCTGCATTCGTTCGTGTCGGAGCGGGTTGATCGG
                      ____________________________________________________________
consensus             ATCTGCGTCGACGTTGCGCTGCCGGTTCTGCATTCGTTCGTGTCGGAGCGGGTTGATCGG
 
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JMSF037D09-           ATG                                                         
rJMSF037D09+          ATGGTGGAGAAGGGGATGATTGAGGAGGCGAGAGGCATGTTTAATCCGGCGAGCAGGGAT
                      ____________________________________________________________
consensus             ATGGTGGAGAAGGGGATGATTGAGGAGGCGAGAGGCATGTTTAATCCGGCGAGCAGGGAT
 
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rJMSF037D09+          TACTCTAAGGGATTACGTCGAGCAATTGGTATGCAGGAATTAGACCGGTACTTCCGCATT
                      ____________________________________________________________
consensus             TACTCTAAGGGATTACGTCGAGCAATTGGTATGCAGGAATTAGACCGGTACTTCCGCATT
 
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rJMSF037D09+          GAATCCGACGAGGAACACCGCGCGAGGCTACTGGAAGACGCCATTAACGACGTGAAGAAG
                      ____________________________________________________________
consensus             GAATCCGACGAGGAACACCGCGCGAGGCTACTGGAAGACGCCATTAACGACGTGAAGAAG
 
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rJMSF037D09+          AACACCAGAACACTAGCGTGCCGGCAGCTAGAGAAAATCAAGCGACTGAAGCACGTCAAG
                      ____________________________________________________________
consensus             AACACCAGAACACTAGCGTGCCGGCAGCTAGAGAAAATCAAGCGACTGAAGCACGTCAAG
 
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rJMSF037D09+          GGGTGGAAGATACACCGCCTGGACGCCACGGAGGCGTTCCTTAAGCGCGGCGGCAGTGAA
                      ____________________________________________________________
consensus             GGGTGGAAGATACACCGCCTGGACGCCACGGAGGCGTTCCTTAAGCGCGGCGGCAGTGAA
 
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rJMSF037D09+          GCGGATCAAGCGTGGGAGAATCTCGTGGTGGCGCCCGGCACCGCCATCCTCAACAGATTC
                      ____________________________________________________________
consensus             GCGGATCAAGCGTGGGAGAATCTCGTGGTGGCGCCCGGCACCGCCATCCTCAACAGATTC
 
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rJMSF037D09+          TTGCACAGCCATGCTAGCTCTGGCTCCTTGTTTTTCACCGCCAACAACCTTCTCATCCCG
                      ____________________________________________________________
consensus             TTGCACAGCCATGCTAGCTCTGGCTCCTTGTTTTTCACCGCCAACAACCTTCTCATCCCG
 
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rJMSF037D09+          CCTGCCGCCGCCCGAGCCACCGTCGCCGCAGCCGCAATTCACTAGATCCATAAAATCAAA
                      ____________________________________________________________
consensus             CCTGCCGCCGCCCGAGCCACCGTCGCCGCAGCCGCAATTCACTAGATCCATAAAATCAAA
 
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rJMSF037D09+          TTAATCAGGGAGCGGCTTATTAGCCTTCTTAATTGAGTCCAGTTAAATCCCAAGATGAGA
                      ____________________________________________________________
consensus             TTAATCAGGGAGCGGCTTATTAGCCTTCTTAATTGAGTCCAGTTAAATCCCAAGATGAGA
 
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rJMSF037D09+          CAGAATTTATCAGTACACACTTTGATCATCAATCAAATTAAGCATAATTCAATAACCTGC
                      ____________________________________________________________
consensus             CAGAATTTATCAGTACACACTTTGATCATCAATCAAATTAAGCATAATTCAATAACCTGC