Contig 010035:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020A08Sequence716010035 (4)gb|EYU19393.1|5e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]744010035 (4)gb|EYU19393.1|7e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]
JMSF036P07Sequence659010035 (4)gb|EYU19393.1|3e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]715010035 (4)gb|EYU19393.1|5e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF020A08- GGGGCTGCGATTCTGGAGGCAGTTCGAACAACAAT
JMSF036P07- GGGGGCTGCGATTCTGGAGGCAGTTCGAACAACAAT
                      ____________________________________________________________
consensus GGGGGCTGCGATTCTGGAGGCAGTTCGAACAACAAT
 
. : . : . : . : . : . :
JMSF020A08- CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
JMSF036P07- CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
rJMSF020A08+ CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
                      ____________________________________________________________
consensus CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
 
. : . : . : . : . : . :
JMSF020A08- CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
JMSF036P07- CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
rJMSF020A08+ CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
rJMSF036P07+ TTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
                      ____________________________________________________________
consensus CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
 
. : . : . : . : . : . :
JMSF020A08- TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
JMSF036P07- TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
rJMSF020A08+ TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
rJMSF036P07+ TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
                      ____________________________________________________________
consensus TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
 
. : . : . : . : . : . :
JMSF020A08- AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
JMSF036P07- AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
rJMSF020A08+ AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
rJMSF036P07+ AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
                      ____________________________________________________________
consensus AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
 
. : . : . : . : . : . :
JMSF020A08- AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
JMSF036P07- AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
rJMSF020A08+ AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
rJMSF036P07+ AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
                      ____________________________________________________________
consensus AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
 
. : . : . : . : . : . :
JMSF020A08- GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
JMSF036P07- GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
rJMSF020A08+ GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
rJMSF036P07+ GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
                      ____________________________________________________________
consensus GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
 
. : . : . : . : . : . :
JMSF020A08- CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
JMSF036P07- CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
rJMSF020A08+ CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
rJMSF036P07+ CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
                      ____________________________________________________________
consensus CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
 
. : . : . : . : . : . :
JMSF020A08- ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
JMSF036P07- ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
rJMSF020A08+ ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
rJMSF036P07+ ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
                      ____________________________________________________________
consensus ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
 
. : . : . : . : . : . :
JMSF020A08- CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
JMSF036P07- CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
rJMSF020A08+ CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
rJMSF036P07+ CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
                      ____________________________________________________________
consensus CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
 
. : . : . : . : . : . :
JMSF020A08- TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGA
JMSF036P07- TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
rJMSF020A08+ TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
rJMSF036P07+ TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
                      ____________________________________________________________
consensus TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
 
. : . : . : . : . : . :
JMSF036P07- TATCTG
rJMSF020A08+ TATCT-GCTGGTTTATGTTTGTGCAGAAAAACATGTTAAATATTCACTTTTACTATAATG
rJMSF036P07+ TATCTGGCTGGTTTATGTTTGTGCAGAAAAACATGTTAAATATTCACTTTTACTATAATG
                      ____________________________________________________________
consensus TATCTGGCTGGTTTATGTTTGTGCAGAAAAACATGTTAAATATTCACTTTTACTATAATG
 
. : . : . : . : . : . :
rJMSF020A08+ TTTTGAGAGAATATTGTATTTTCAATGGGTAGATATGAGGATATCATACATATTTGTAGA
rJMSF036P07+ TTTTGAGAGAATATTGTATTTTCAATGGGTAGATATGAGGATATCATACATATTTGTAGA
                      ____________________________________________________________
consensus TTTTGAGAGAATATTGTATTTTCAATGGGTAGATATGAGGATATCATACATATTTGTAGA
 
. : . : . : . : . : . :
rJMSF020A08+ TTTCTTATGACTCATATCTGTGTT
rJMSF036P07+ TTTCTTATGACTCATATCTGTGTTTGGAGTAAATACTCCCTCTCTCTACTGTACACACTG
                      ____________________________________________________________
consensus TTTCTTATGACTCATATCTGTGTTTGGAGTAAATACTCCCTCTCTCTACTGTACACACTG