Contig 010033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012N17Sequence430009457 (3)ref|XP_009797320.1|2e-23PREDICTED: uncharacterized protein LOC104243766 isoform X1 [Nicotiana sylvestri800010033 (3)ref|XP_009797328.1|5e-38PREDICTED: uncharacterized protein LOC104243766 isoform X2 [Nicotiana sylvestri
JMSF036G22Sequence563009457 (3)ref|XP_006347864.1|4e-45PREDICTED: ankyrin repeat domain-containing protein 12-like [Solanum tuberosum]784010033 (3)ref|XP_009797328.1|1e-41PREDICTED: uncharacterized protein LOC104243766 isoform X2 [Nicotiana sylvestri
JMSF044A12Sequence504009457 (3)ref|XP_006347864.1|1e-37PREDICTED: ankyrin repeat domain-containing protein 12-like [Solanum tuberosum]551010033 (3)ref|XP_009797328.1|1e-28PREDICTED: uncharacterized protein LOC104243766 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012N17+ CGGANGGCATTCCTTACCAAAACCGAGATCCGT
rJMSF036G22+ CCGT
                      ____________________________________________________________
consensus CGGANGGCATTCCTTACCAAAACCGAGATCCGT
 
. : . : . : . : . : . :
rJMSF012N17+ TAGGAGAAGGCATCATAAATCATCAAGAAGTAATGATGATGCTGGAAATTTTGAAGATGC
rJMSF036G22+ TAGGAGAAGGCATCATAAATCATCAAGAAGTAATGATGATGCTGGAAATTTTGAAGATGC
                      ____________________________________________________________
consensus TAGGAGAAGGCATCATAAATCATCAAGAAGTAATGATGATGCTGGAAATTTTGAAGATGC
 
. : . : . : . : . : . :
rJMSF012N17+ TAGGGTTGTGAATAGAAGTAATCGAAGAAGGGAACATTCAAAAACAGGGCTACAGGTCTT
rJMSF036G22+ TAGGGTTGTGAATAGAAGTAATCGAGGAAGGGAACATTCAAAAACAGGGCTACAGGTCTT
                      ____________________________________________________________
consensus TAGGGTTGTGAATAGAAGTAATCGAGGAAGGGAACATTCAAAAACAGGGCTACAGGTCTT
 
. : . : . : . : . : . :
rJMSF012N17+ GCTTGATGATAGGCACCACCAAAGAGATGACGAGGAAAGGGTGATAGATAAACTCTTGAT
rJMSF036G22+ GCTTGATGATAGGCACCACCAAAGAGATGACGAGGAAAGGGTGATAGATAAACTCTTGAT
                      ____________________________________________________________
consensus GCTTGATGATAGGCACCACCAAAGAGATGACGAGGAAAGGGTGATAGATAAACTCTTGAT
 
. : . : . : . : . : . :
rJMSF012N17+ GCACTACAGTAAGAAATCATCCAACTATGACATAGAAAAGTTAAGGAAAAAGCCAGAAAC
rJMSF044A12+ AGAAAAGTTAAGGAAAAAGCCAGAAAC
rJMSF036G22+ GCACTACAGTAAGAAATCATCCAACTATGACATAGAAAAGTTAAGGAAAAAGCCAGAAAC
                      ____________________________________________________________
consensus GCACTACAGTAAGAAATCATCCAACTATGACATAGAAAAGTTAAGGAAAAAGCCAGAAAC
 
. : . : . : . : . : . :
rJMSF012N17+ TCATGGTTCACACCCGAGAGGCAGTGATGCTGATAAAACCTTACATGAGAGGATCAGAAG
rJMSF044A12+ TCATGGTTCACACCCGAGAGGCAGTGATGCTGATAAAACCTTACATGAGAGGATCAGAAG
rJMSF036G22+ TCATGGTTCACACCCGAGAGGCAGTGATGCTGATAAAACCTTACATGAGAGGATCAGAAG
                      ____________________________________________________________
consensus TCATGGTTCACACCCGAGAGGCAGTGATGCTGATAAAACCTTACATGAGAGGATCAGAAG
 
. : . : . : . : . : . :
rJMSF012N17+ AGATGAATGTGAAATAAATTCTGATGTACCTCCACCACCTACAAGATCTATTTCTCTTCC
rJMSF044A12+ AGATGAATGTGAAATAAATTCTGATGTACCTCCACCACCTACAAGATCTATTTCTCTTCC
rJMSF036G22+ AGATGAATGTGAAATAAATTCTGATGTACCTCCACCACCTACAAGATCTATTTCTCTTCC
                      ____________________________________________________________
consensus AGATGAATGTGAAATAAATTCTGATGTACCTCCACCACCTACAAGATCTATTTCTCTTCC
 
. : . : . : . : . : . :
rJMSF012N17+ ACACGAACAACCTACTCCTTCAGAGACAAAAAAGGTTTACATGCGTGCCAATTCCTTTCA
rJMSF044A12+ ACACGAACAACCTACTCCTTCAGAGACAAAAAAGGTTTACATGCGTGCCAATTCNTTTCA
rJMSF036G22+ ACACGAACAACCTACTCCTTCAGAGACAAAAAAGGTTTACATGCGTGCCAATTCCTTTCA
                      ____________________________________________________________
consensus ACACGAACAACCTACTCCTTCAGAGACAAAAAAGGTTTACATGCGTGCCAATTCCTTTCA
 
. : . : . : . : . : . :
rJMSF012N17+ GCCTGACAACCAGGCACGTCATGTCCATCCAAAATTACCTGACTATGAAGATTTGGCTGC
rJMSF044A12+ GCCTGACAACCAGGCACGTCATGTCCATCCAAAATTACCTGACTATGAAGATTTGGCTGC
rJMSF036G22+ GCCTGACAACCAGGCACGTCATGTCCATCCAAAATTACCTGACTATGAAGATTTGGCTGC
                      ____________________________________________________________
consensus GCCTGACAACCAGGCACGTCATGTCCATCCAAAATTACCTGACTATGAAGATTTGGCTGC
 
. : . : . : . : . : . :
rJMSF012N17+ CCAATTTGCTGCCCTGAGAGGAATATGAAGGTGGCTGGCCATCTTGAGAGGAGAAACTAA
rJMSF044A12+ CCAATTTGCTGCCCTGAGAGGAATATGAAGGTGGCTGGCCATCTTGAGAGGAGAAACTAA
rJMSF036G22+ CCAATTTGCTGCCCTGAGAGGAATATGAAGGTGGCTGGCCATCTTGAGAGGAGAAACTAA
                      ____________________________________________________________
consensus CCAATTTGCTGCCCTGAGAGGAATATGAAGGTGGCTGGCCATCTTGAGAGGAGAAACTAA
 
. : . : . : . : . : . :
rJMSF012N17+ TCACTGATATTCCTTGTTGACCTCCAATCTTTGATTCTTTGGGTTCATGAGTTGTTATAA
rJMSF044A12+ TCACTGATATTCCTTGTTGACCTCCAATCTTTGATTCTTTGGGTTCATGAGTTGTTATAA
rJMSF036G22+ TCACTGATATTCCTTGTTGACCTCCAATCTTTGATTCTTTGGGTTCATGAGTTGTTATAA
                      ____________________________________________________________
consensus TCACTGATATTCCTTGTTGACCTCCAATCTTTGATTCTTTGGGTTCATGAGTTGTTATAA
 
. : . : . : . : . : . :
rJMSF012N17+ AGTGGCGCTAAAATCACAAACAAATACACGAGTACGACTTTCTTTCCTGAATCCGCATTC
rJMSF044A12+ AGTGGCGCTAAAATCACAAACAAATACACGAGTACGACTTTCTTTCCTGAATCCGCATTC
rJMSF036G22+ AGTGGCGCTAAAATCACAAACAAATACACGAGTACGACTTTCTTTCCTGAATCCGCATTC
                      ____________________________________________________________
consensus AGTGGCGCTAAAATCACAAACAAATACACGAGTACGACTTTCTTTCCTGAATCCGCATTC
 
. : . : . : . : . : . :
rJMSF012N17+ TTGAGTGTATAAGTATTGTTTACCATTCAGTTTTACTGATTGTAAAGTTGAACAGTTCAT
rJMSF044A12+ TTGAGTGTATAAGTATTGTTTACCATTCAGTTTTACTGATTGTAAAGTTGAACAGTTCAT
rJMSF036G22+ TTGAGTGTATAAGTATTGTTTACCATTCAGTTTTACTGATTGTAAAGTTGAACAGTTCAT
                      ____________________________________________________________
consensus TTGAGTGTATAAGTATTGTTTACCATTCAGTTTTACTGATTGTAAAGTTGAACAGTTCAT
 
. : . : . : . : . : . :
rJMSF012N17+ GTAACATTGTCCCCAATGTCATCTGTACTTGAGAGT
rJMSF044A12+ GTAACATTGTCCCCAATGTCATCTGTACTTGAGAGT
rJMSF036G22+ GTAACATTGTCCCCAATGTCATCTGTACTTGAGAGTTGAAATTGAGAATGTTCCACAGCT
                      ____________________________________________________________
consensus GTAACATTGTCCCCAATGTCATCTGTACTTGAGAGTTGAAATTGAGAATGTTCCACAGCT