Contig 010024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008N14Sequence560010024 (4)
JMFN015C09Sequence554010024 (4)
JMSF034A22Sequence587010024 (4)530010024 (4)

Alignment

This contig is upended


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JMFN015C09+                                   GGAAAAGGAAAAAACGGGAAGTGATATGCCACATCC
JMFN008N14+                                   GGAAAAGGAAAAAACGGGAAGTGATATGCCACATCC
JMSF034A22+                        NTTTTTTTTTAGGAAAAGGAAAAAACGGGAAGTGATATGCCACATCC
                      ____________________________________________________________
consensus                          NTTTTTTTTTAGGAAAAGGAAAAAACGGGAAGTGATATGCCACATCC
 
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JMFN015C09+           ACCTCAATGCGGATGCACAGGCTAGTCTGAACAAAACATACTATTCATATCCTTACAACC
JMFN008N14+           ACCTCAATGCGGATGCACAGGCTAGTCTGAACAAAACATACTATTCATATCCTTACAACC
JMSF034A22+           ACCTCAATGCGGATGCACAGGCTAGTCTGAACAAAACATACTATTCATATCCTTACAACC
rJMSF034A22-                    GGATGCACAGGCTAGTCTGAACAAAACATACTATTCATATCCTTACAACC
                      ____________________________________________________________
consensus             ACCTCAATGCGGATGCACAGGCTAGTCTGAACAAAACATACTATTCATATCCTTACAACC
 
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JMFN015C09+           ATGACACACAGGCCCAAAACACTAACTGATCAGTCCAAGGGAGCTACACTAACAACCCGA
JMFN008N14+           ATGACACACAGGCCCAAAACACTAACTGATCAGTCCAAGGGAGCTACACTAACAACCCGA
JMSF034A22+           ATGACACACAGGCCCAAAACACTAACTGATCAGTCCAAGGGAGCTACACTAACAACCCGA
rJMSF034A22-          ATGACACACAGGCCCAAAACACTAACTGATCAGTCCAAGGGAGCTACACTAACAACCCGA
                      ____________________________________________________________
consensus             ATGACACACAGGCCCAAAACACTAACTGATCAGTCCAAGGGAGCTACACTAACAACCCGA
 
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JMFN015C09+           CAGCTAACGCGCTCGCCATAAGCTACTCAAGCCCACTGACTATCGGAGAGACGTCGACCG
JMFN008N14+           CAGCTAACGCGCTCGCCATAAGCTACTCAAGCCCACTGACTATCGGAGAGACGTCGACCG
JMSF034A22+           CAGCTAACGCGCTCGCCATAAGCTACTCAAGCCCACTGACTATCGGAGAGACGTCGACCG
rJMSF034A22-          CAGCTAACGCGCTCGCCATAAGCTACTCAAGCCCACTGACTATCGGAGAGACGTCGACCG
                      ____________________________________________________________
consensus             CAGCTAACGCGCTCGCCATAAGCTACTCAAGCCCACTGACTATCGGAGAGACGTCGACCG
 
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JMFN015C09+           TCACCGCCAGAGAAAAGCTGCCACCTTACTTGCTCCGAGGTTGCCGTAGGAACGTCGAAG
JMFN008N14+           TCACCGCCAGAGAAAAGCTGCCACCTTACTTGCTCCGAGGTTGCCGTAGGAACGTCGAAG
JMSF034A22+           TCACCGCCAGAGAAAAGCTGCCACCTTACTTGCTCCGAGGTTGCCGTAGGAACGTCGAAG
rJMSF034A22-          TCACCGCCAGAGAAAAGCTGCCACCTTACTTGCTCCGAGGTTGCCGTAGGAACGTCGAAG
                      ____________________________________________________________
consensus             TCACCGCCAGAGAAAAGCTGCCACCTTACTTGCTCCGAGGTTGCCGTAGGAACGTCGAAG
 
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JMFN015C09+           GGGCAAACCAGTTGCTGTTTTGCCGAGCTCCACCATCTGTTCACACAAGCCATGCAGGTC
JMFN008N14+           GGGCAAACCAGTTGCTGTTTTGCCGAGCTCCACCATCTGTTCACACAAGCCATGCAGGTC
JMSF034A22+           GGGCAAACCAGTTGCTGTTTTGCCGAGCTCCACCATCTGTTCACACAAGCCATGCAGGTC
rJMSF034A22-          GGGCAAACCAGTTGCTGTTTTGCCGAGCTCCACCATCTGTTCACACAAGCCATGCAGGTC
                      ____________________________________________________________
consensus             GGGCAAACCAGTTGCTGTTTTGCCGAGCTCCACCATCTGTTCACACAAGCCATGCAGGTC
 
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JMFN015C09+           CGTCACCCGAGCTGCCGGTGGAGGGCTGTTGTGGTTGTCGTTGATGGACTGTTCGCTAAC
JMFN008N14+           CGTCACCCGAGCTGCCGGTGGAGGGCTGTTGTGGTTGTCGTTGATGGACTGTTCGCTAAC
JMSF034A22+           CGTCACCCGAGCTGCCGGTGGAGGGCTGTTGTGGTTGTCGTTGATGGACTGTTCGCTAAC
rJMSF034A22-          CGTCACCCGAGCTGCCGGTGGAGGGCTGTTGTGGTTGTCGTTGATGGACTGTTCGCTAAC
                      ____________________________________________________________
consensus             CGTCACCCGAGCTGCCGGTGGAGGGCTGTTGTGGTTGTCGTTGATGGACTGTTCGCTAAC
 
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JMFN015C09+           CGGAGAACCACAACACTGCCGCCGACTTGCTTGCTACGAGAACTACGCTGATCGCCGGAG
JMFN008N14+           CGGAGAACCACAACACTGCCGCCGACTTGCTTGCTACGAGAACTACGCTGATCGCCGGAG
JMSF034A22+           CGGAGAACCACAACACTGCCGCCGACTTGCTTGCTACGAGAACTACGCTGATCGCCGGAG
rJMSF034A22-          CGGAGAACCACAACACTGCCGCCGACTTGCTTGCTACGAGAACTACGCTGATCGCCGGAG
                      ____________________________________________________________
consensus             CGGAGAACCACAACACTGCCGCCGACTTGCTTGCTACGAGAACTACGCTGATCGCCGGAG
 
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JMFN015C09+           CTGCTAACGGTCTCCAAAGTTACTCACGATCAACCCTCACCACTGTAGGTCAAAGAAAGG
JMFN008N14+           CTGCTAACGGTCTCCAAAGTTACTCACGATCAACCCTCACCACTGTAGGTCAAAGAAAGG
JMSF034A22+           CTGCTAACGGTCTCCAAAGTTACTCACGATCAACCCTCACCACTGTAGGTCAAAGAAAGG
rJMSF034A22-          CTGCTAACGGTCTCCAAAGTTACTCACGATCAACCCTCACCACTGTAGGTCAAAGAAAGG
                      ____________________________________________________________
consensus             CTGCTAACGGTCTCCAAAGTTACTCACGATCAACCCTCACCACTGTAGGTCAAAGAAAGG
 
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JMFN015C09+           GAAAGAACACGGATGGCTTCGCTCACCTTTCGGATGGA                      
JMFN008N14+           GAAAGAACACGGATGGCTTCGCTCACCTTTCAGATGGA                      
JMSF034A22+           GAAAGAACACGGATGGCTTCGCTCACCTTTCGGATGGACAAGATGAGGCGGAAAACGGCC
rJMSF034A22-          GAAAGAACACGGATGGCTTCGCTCACCTTTCGGATGGACNAGATGAGGCGGAAAACGGCC
                      ____________________________________________________________
consensus             GAAAGAACACGGATGGCTTCGCTCACCTTTCGGATGGACAAGATGAGGCGGAAAACGGCC