| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN007G09 | Sequence | 538 | 009998 (6) | ref|XP_004250405.1| | 1e-34 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | |||||
| JMFN018O13 | Sequence | 607 | 009998 (6) | ref|XP_004250405.1| | 9e-51 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | |||||
| JMSF029B16 | Sequence | 655 | 000802 (7) | ref|XP_009794293.1| | 2e-40 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 682 | 009998 (6) | ref|XP_004250405.1| | 2e-30 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont |
| JMSF035N21 | Sequence | 681 | 000802 (7) | ref|XP_009794293.1| | 3e-47 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 255 | 009998 (6) | |||
| JMSF037I24 | Sequence | 648 | 000802 (7) | ref|XP_009794293.1| | 3e-42 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 660 | 009998 (6) | ref|XP_004250405.1| | 2e-30 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont |
| JMSF045K09 | Sequence | 731 | 021178 | ref|XP_009768382.1| | 4e-51 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 796 | 009998 (6) | ref|XP_004250405.1| | 4e-58 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont |
This contig is upended
. : . : . : . : . : . :
rJMSF045K09+ GTCGGGGACAAGCTTAGGG
____________________________________________________________
consensus GTCGGGGACAAGCTTAGGG
. : . : . : . : . : . :
JMFN018O13- CCGCCATAAATTTCACGCTATGTGTGTCGATGCTTGGCTAACATCGTGGA
rJMSF045K09+ TTCTGCCATGCCGCCATAAATTTCACGCTATGTGTGTCGATGCTTGGCTAACATCGTGGA
____________________________________________________________
consensus TTCTGCCATGCCGCCATAAATTTCACGCTATGTGTGTCGATGCTTGGCTAACATCGTGGA
. : . : . : . : . : . :
rJMSF037I24+ CGT
JMFN018O13- GAACTTTCTGCCCGGTTTGTAAACGCGACGCTAGAACCAGCACCGGTGATCCACCGGCGT
rJMSF045K09+ GAACTTTCTGCCCGGTTTGTAAACGCGACGCTAGAACCAGCACCGGTGATCCACCGGCGT
____________________________________________________________
consensus GAACTTTCTGCCCGGTTTGTAAACGCGACGCTAGAACCAGCACCGGTGATCCACCGGCGT
. : . : . : . : . : . :
rJMSF037I24+ CAGAGTCTACACCGTTGCTTTCATCGAGTGCTTCTCTATCGTCAATGGGATCTGTTCGAT
JMFN018O13- CAGAGTCTACACCGTTGCTTTCATCGAGTGCTTCTCTATCGTCAATGGGATCTGTTCGAT
rJMSF045K09+ CAGAGTCTACACCGTTGCTTTCATCGAGTGCTTCTCTATCGTCAATGGGATCTGTTCGAT
rJMSF029B16+ TCGTCAATGGGATCTGTTCGAT
____________________________________________________________
consensus CAGAGTCTACACCGTTGCTTTCATCGAGTGCTTCTCTATCGTCAATGGGATCTGTTCGAT
. : . : . : . : . : . :
rJMSF037I24+ CATCGTTAGCATCATCGTCGGCAATACAAATACGGTCCCCCTCGTCGTCCCGACCCCCTT
JMFN018O13- CATCGTTAGCATCATCGTCGGCAATACAAATACGGTCCCCCTCGTCGTCCCGACCCCCTT
rJMSF045K09+ CATCGTTAGCATCATCGTCGGCAATACAAATACGGTCCCCCTCGTCGTCCCGACCCCCTT
rJMSF029B16+ CATCGTTAGCATCATCGTCGGCAATACAAATACGGTCCCCCTNGTNGTCCCGACCCCCTT
____________________________________________________________
consensus CATCGTTAGCATCATCGTCGGCAATACAAATACGGTCCCCCTCGTCGTCCCGACCCCCTT
. : . : . : . : . : . :
rJMSF037I24+ CACGACCTCAATCAATCTCCAGCACACCTTACACCCACCGCCATTCACTTCAGTCCTACA
JMFN018O13- CACGACCTCAATCAATCTCCAGCACACCTTACACCCACCGCCATTCACTTCAGTCCTACA
rJMSF045K09+ CACGACCTCAATCAATCTCCAGCACACCTTACACCCACCGCCATTCACTTCAGTCCTACA
JMFN007G09- GACCTCAATCAATCTCCAGCACACCTTACACCCACCGCCATTCACTTCAGTCCTACA
rJMSF029B16+ CACGACCTCAATCAATNTCCAGCACACCTTACACCCACCGCCATTCACTTCAGTCCTACA
____________________________________________________________
consensus CACGACCTCAATCAATCTCCAGCACACCTTACACCCACCGCCATTCACTTCAGTCCTACA
. : . : . : . : . : . :
rJMSF037I24+ TCCAATCACCCCATCTTACCGCAAGCCGGAGCTCGGTGGACCTCAGAAACGCATCATCTT
JMFN018O13- TCCAATCACCCCATCTTACCGCAAGCCGGAGCTCGGTGGACCTCAGAAACGCATCATCTT
rJMSF045K09+ TCCAATCACCCCATCTTACCGCAAGCCGGAGCTCGGTGGACCTCAGAAACGCATCATCTT
JMFN007G09- TCCAATCACCCCATCTTACCGCAAGCCGGAGCTCGGTGGACCTCAGAAACGCATCATCTT
rJMSF029B16+ TCCAATCACCCCATNTTACCGCAAGCCGGAGCTCGGTGGACCTCAGAAACGCATCATTTT
____________________________________________________________
consensus TCCAATCACCCCATCTTACCGCAAGCCGGAGCTCGGTGGACCTCAGAAACGCATCATCTT
. : . : . : . : . : . :
rJMSF037I24+ CACAACGATCCCGCGCTTCTTACCTCGTTTCGCCTCAGAATCATTCCCTAGGCGGCTACC
JMFN018O13- CACAACGATCCCGCGCTTCTTACCTCGTTTCGCCTCAGAATCATTCCCTAGGCGGCTACC
rJMSF045K09+ CACAACGATCCCGCGCTTCTTACCTCGTTTCGCCTCAGAATCATTCCCTAGGCGGCTACC
JMFN007G09- CACAACGATCCCGCGCTTCTTACCTCGTTTCGCCTCAGAATCATTCCCTAGGCGGCTACC
rJMSF029B16+ CACAACGATCCCGCGCTTNTTACCTCGTTTCGCCTCAGAATCATTCCCTAGGCGGNTACC
____________________________________________________________
consensus CACAACGATCCCGCGCTTCTTACCTCGTTTCGCCTCAGAATCATTCCCTAGGCGGCTACC
. : . : . : . : . : . :
rJMSF037I24+ CTTCCATGTCGCCTCTTAACTCGAGATACATGTCTCCATACATTCCAAGCCCGGGGGGCA
JMFN018O13- CTTCCATGTCGCCTCTTAACTCGAGATACATGTCTCCATACATTCCAAGCCCGGGGGGCA
rJMSF045K09+ CTTCCATGTCGCCTCTTAACTCGAGATACATGTCTCCATACATTCCAAGCCCGGGGGGCA
JMFN007G09- CTTCCATGTCGCCTCTTAACTCGAGATACATGTCTCCATACATTCCAAGCCCGGGGGGCA
rJMSF029B16+ CTTCCANGTCGCCTNTTAACTCGAGATACATGTNTCCATACATTCCAAGCCCGGGGGGCA
____________________________________________________________
consensus CTTCCATGTCGCCTCTTAACTCGAGATACATGTCTCCATACATTCCAAGCCCGGGGGGCA
. : . : . : . : . : . :
rJMSF037I24+ ATGCTTCAACAAGTTACCTCGGCTCCTCTAGTCGGCACCCGAACCCACTGCGGCCGAGCG
JMFN018O13- ATGCTTCAACAAGTTACCTCGGCTCCTCTAGTCGGCACCCGAACCCACTGCGGCCGAGCG
rJMSF045K09+ ATGCTTCAACAAGTTACCTCGGCTCCTCTAGTCGGCACCCGAACCCACTGCGGCCGAGCG
JMFN007G09- ATGCTTCAACAAGTTACCTCGGCTCCTCTAGTCGGCACCCGAACCCACTGCGGCCGAGCG
rJMSF029B16+ ANGCTTCAACAAGTTACCTNGGCTCCTNTAGTCGGCACCCGAACCCNCTGCGGCCGAGNG
____________________________________________________________
consensus ATGCTTCAACAAGTTACCTCGGCTCCTCTAGTCGGCACCCGAACCCACTGCGGCCGAGCG
. : . : . : . : . : . :
rJMSF037I24+ ACTCCTATACGAGCTTTTCTCCATTCGCTTCGGCTCAGTCCCTCCCGGGTTGTGAGTAGG
JMFN018O13- ACTCCTATACGAGCTTTTCTCCATTCGCTTCNGCTCAGTCCCTCCCGGGTTGTGAGTAGG
rJMSF035N21+ TCCTATACGAGCTTTTNTCCATTCGCTTNGGNTCAGTCCCTCCCGGGNTGNGANTAGG
rJMSF045K09+ ACTCCTATACGAGCTTTTCTCCATTCGCTTCGGCTCAGTCCCTCCCGGGTTGTGAGTAGG
JMFN007G09- ACTCCTATACGAGCTTTTCTCCATTCGCTTCGGCTCAGTCCCTCCCGGGTTGTGAGTAGG
rJMSF029B16+ ACTCCTATACGAGCTTTTNTCCATTCGNTTNGGCTCAGTCCCTCCCGGGTTGTGAGTAGG
____________________________________________________________
consensus ACTCCTATACGAGCTTTTCTCCATTCGCTTCGGCTCAGTCCCTCCCGGGTTGTGAGTAGG
. : . : . : . : . : . :
rJMSF037I24+ GACTTCGCTGATCCTGTAGAACGAAGAACAGATGGCAAGACGAGATTGGGATTTGTACAT
JMFN018O13- GACTTCGCTGATCCTGT
rJMSF035N21+ GACTTNGCTGATCCTGTAGAACGAAGAACAGATGGCAAGACGNGATTGGGATTTGNACAT
rJMSF045K09+ GACTTCGCTGATCCTGTAGAACGAAGAACAGATGGCAAGACGAGATTGGGATTTGTACAT
JMFN007G09- GACTTCGCTGATCCTGTAGAACGAAGAACAGATGGCAAGACGAGATTGGGATTTGTACAT
rJMSF029B16+ GACTTCGCTGATCCTGTAGAACGAAGAACAGATGGCAAGACGAGATTGGGATTTGTACAT
____________________________________________________________
consensus GACTTCGCTGATCCTGTAGAACGAAGAACAGATGGCAAGACGAGATTGGGATTTGTACAT
. : . : . : . : . : . :
rJMSF037I24+ TACAGCATGATAATGTGTGGTTTTTGTTCTGTATTGTAGTTTTGATGTTTATGTTGAGAT
rJMSF035N21+ TACAGCANGATAANGTGNGGNTTTTGTTCTGTATTGNAGTTTTGANGNTTATGTTGAGAT
rJMSF045K09+ TACAGCATGATAATGTGTGGTTTTTGTTCTGTATTGTAGTTTTGATGTTTATGTTGAGAT
JMFN007G09- TACAGCATGATAATGTGTGGTTTTTGTTCTGTATTGTAGTTTTGATGTTTATGTTGAGAT
rJMSF029B16+ TACAGCATGATAATGTGTGGTTTTTGTTCTGTATTGTAGTTTTGANGTTTATGTTGAGAT
____________________________________________________________
consensus TACAGCATGATAATGTGTGGTTTTTGTTCTGTATTGTAGTTTTGATGTTTATGTTGAGAT
. : . : . : . : . : . :
rJMSF037I24+ TTGTCTGGTGCACATTGCTTTCCCCTTTCCTGTTGGGTTGATTGATTATTTAGA
rJMSF035N21+ TTGTTTGGNGCNCATTGCTTTCCCCTTTCCNGTTGGGNTGATTGNTTATTTA
rJMSF045K09+ TTGTCTGGTGCACATTGCTTTCCCCTTTCCTGTTGGGTTGATTGATTATTTAGA
JMFN007G09- TTGTCTGGTGCACATTGCTTTCCCCTTTCCTGTTGGGTTGATTGATTATTTAGATGT
rJMSF029B16+ TTGTNTGGTGCACATTGCTTTCCCCTTTCCTGTTGGGTTGATTGATTATTTAGANGTTTC
____________________________________________________________
consensus TTGTCTGGTGCACATTGCTTTCCCCTTTCCTGTTGGGTTGATTGATTATTTAGATGTTTC
. : . : . : . : . : . :
rJMSF029B16+ TAACTATAATTTGTACATATAGCTGACCTTTCAGATTTCAACTCTTCATGCAATTTTTTT
____________________________________________________________
consensus TAACTATAATTTGTACATATAGCTGACCTTTCAGATTTCAACTCTTCATGCAATTTTTTT