Contig 009996:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009N01Sequence627009996 (2)gb|EYU27538.1|1e-126hypothetical protein MIMGU_mgv1a003312mg [Erythranthe guttata]
JMSF027O18Sequence667009346 (3)ref|XP_006346043.1|8e-80PREDICTED: uncharacterized protein LOC102581957 isoform X2 [Solanum tuberosum]771009996 (2)ref|XP_009592144.1|325PREDICTED: uncharacterized protein LOC104089037 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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JMFN009N01-                  GCAAGCCAGGAGACCTATGGGACATTGGGTGCTATTGTAAGAAGCCAAACAGG
                      ____________________________________________________________
consensus                    GCAAGCCAGGAGACCTATGGGACATTGGGTGCTATTGTAAGAAGCCAAACAGG
 
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JMFN009N01-           AAATCAACAAGTTGGTTTCCTCACAAACCGGCATGTTGCAGTTGATTTAGATTACCCAAA
                      ____________________________________________________________
consensus             AAATCAACAAGTTGGTTTCCTCACAAACCGGCATGTTGCAGTTGATTTAGATTACCCAAA
 
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JMFN009N01-           TCAAAAGATGTTTCACCCTTTGCCACCAACTCTTGGACCTGGCGTATATCTTGGTTCTGT
                      ____________________________________________________________
consensus             TCAAAAGATGTTTCACCCTTTGCCACCAACTCTTGGACCTGGCGTATATCTTGGTTCTGT
 
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JMFN009N01-           TGAGAGGGCTACATCTTTCATTAGAGATGACCTTTGGTATGGCATTTTTGCTGGCTTAAA
                      ____________________________________________________________
consensus             TGAGAGGGCTACATCTTTCATTAGAGATGACCTTTGGTATGGCATTTTTGCTGGCTTAAA
 
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JMFN009N01-           TCCAGAGACATTTGTAAGAGCAGACGGTGCATTCATTCCTTTCACAGATGATTTTGACAT
                      ____________________________________________________________
consensus             TCCAGAGACATTTGTAAGAGCAGACGGTGCATTCATTCCTTTCACAGATGATTTTGACAT
 
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JMFN009N01-           GACTGCAGTGACGACATCTGTGAAAGGCATTGGAGAGATAGGAGGTGTCAAGATCATAGA
                      ____________________________________________________________
consensus             GACTGCAGTGACGACATCTGTGAAAGGCATTGGAGAGATAGGAGGTGTCAAGATCATAGA
 
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JMFN009N01-           CTTGCAAGCCTCCATCAATAGTCTTATCGGGAAGCAGGTGATGAAGGTCGGAAGGAGTTC
                      ____________________________________________________________
consensus             CTTGCAAGCCTCCATCAATAGTCTTATCGGGAAGCAGGTGATGAAGGTCGGAAGGAGTTC
 
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JMFN009N01-           TGGTTTTACCACTGGGACTGTGTTGGCATATGCCCTTGAATATAACGATGAAAAGGGGAT
                      ____________________________________________________________
consensus             TGGTTTTACCACTGGGACTGTGTTGGCATATGCCCTTGAATATAACGATGAAAAGGGGAT
 
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JMFN009N01-           ATGCTTCTTAACTGACTTTCTGGTGGTCGGAGAGAACCAACAGACTTTTGACCTTGAAGG
rJMSF027O18+                  TAACTGACTTTCTGGTGGTCGGAGAGAACCAACAGACTTTTGACC-TGAAGG
                      ____________________________________________________________
consensus             ATGCTTCTTAACTGACTTTCTGGTGGTCGGAGAGAACCAACAGACTTTTGACCTTGAAGG
 
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JMFN009N01-           GGACAGTGGTAGCCTAATAATCTTAAAGGGTGAGAATGGGGAGAAAGCACGACCAGTCGG
rJMSF027O18+          GGACAGTGGTAGCCTAATAATCTTAAAGGGTGAGAATGGGGAGAAAGCACGACCAGTCGG
                      ____________________________________________________________
consensus             GGACAGTGGTAGCCTAATAATCTTAAAGGGTGAGAATGGGGAGAAAGCACGACCAGTCGG
 
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JMFN009N01-           GATCATATGGGGTGGAACTGCAAATAGGGGTAGG                          
rJMSF027O18+          GATCATATGGGGTGGAACTGCAAATAGGGGTAGGCTTAAATTAAAAGTTGGCCAACCGCC
                      ____________________________________________________________
consensus             GATCATATGGGGTGGAACTGCAAATAGGGGTAGGCTTAAATTAAAAGTTGGCCAACCGCC
 
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rJMSF027O18+          AGAGAACTGGACTAGTGGGGTTGACCTGGGACGTTTGCTCAAATTCCTTGAACTTGATCT
                      ____________________________________________________________
consensus             AGAGAACTGGACTAGTGGGGTTGACCTGGGACGTTTGCTCAAATTCCTTGAACTTGATCT
 
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rJMSF027O18+          CATCACAACCGAGGAAGCTTTGAAAGTTGCAGTACAGGAACAACGAGTTGCTTCAGCAAC
                      ____________________________________________________________
consensus             CATCACAACCGAGGAAGCTTTGAAAGTTGCAGTACAGGAACAACGAGTTGCTTCAGCAAC
 
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rJMSF027O18+          AATGGTGGGCTCCACAGTGGGCGATTCTTCGCCTCCCGATGTGATGCTCCTAAAGGACAA
                      ____________________________________________________________
consensus             AATGGTGGGCTCCACAGTGGGCGATTCTTCGCCTCCCGATGTGATGCTCCTAAAGGACAA
 
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rJMSF027O18+          AATGGAGCCCTTGGGACTTCATATCCAACCGATTCCAATCGAAGATCCTGCTGGTAGTGG
                      ____________________________________________________________
consensus             AATGGAGCCCTTGGGACTTCATATCCAACCGATTCCAATCGAAGATCCTGCTGGTAGTGG
 
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rJMSF027O18+          CCCCGATATAAACTCATCTCCAGTGGAAGCTGCATTTAACATCGAAGATGGAGGGGTGAA
                      ____________________________________________________________
consensus             CCCCGATATAAACTCATCTCCAGTGGAAGCTGCATTTAACATCGAAGATGGAGGGGTGAA
 
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rJMSF027O18+          CTTGGGTCCCAGTATCGAACACCAATTCATTCCAAGCTTCAATGGGCGATCACCGCTCCA
                      ____________________________________________________________
consensus             CTTGGGTCCCAGTATCGAACACCAATTCATTCCAAGCTTCAATGGGCGATCACCGCTCCA
 
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rJMSF027O18+          TTCTGTCGAAGATCAACATGACAGGCCAGTGGTTTATCAGAACCTCTCAGCTCTAAGGAG
                      ____________________________________________________________
consensus             TTCTGTCGAAGATCAACATGACAGGCCAGTGGTTTATCAGAACCTCTCAGCTCTAAGGAG
 
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rJMSF027O18+          TGGCTCTGATCATGAAGAGATTGGCTTTTCTCTGCAGCTGGGAGGCCATGCATCCAAGAG
                      ____________________________________________________________
consensus             TGGCTCTGATCATGAAGAGATTGGCTTTTCTCTGCAGCTGGGAGGCCATGCATCCAAGAG
 
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rJMSF027O18+          GAGACGTTCTGAACCTCCTTCTACCCCCAGTAAAGAAGAACAAAAATGAAATTGCCATTT
                      ____________________________________________________________
consensus             GAGACGTTCTGAACCTCCTTCTACCCCCAGTAAAGAAGAACAAAAATGAAATTGCCATTT
 
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rJMSF027O18+          CATAATTATTTGTTTCAACTTATGTTGTTTGCTTGGGACTCAAGTAGGAGTGCAAGACTC
                      ____________________________________________________________
consensus             CATAATTATTTGTTTCAACTTATGTTGTTTGCTTGGGACTCAAGTAGGAGTGCAAGACTC