Contig 009995:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022C01Sequence479009380 (5)720009995 (2)ref|XP_009757672.1|2e-25PREDICTED: uncharacterized protein LOC104210445 isoform X5 [Nicotiana sylvestri
JMSF027N20Sequence673009380 (5)ref|XP_009757655.1|3e-08PREDICTED: uncharacterized protein LOC104210445 isoform X2 [Nicotiana sylvestri662009995 (2)

Alignment

This contig is upended


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rJMFF022C01+                                               CAAGGAAAATGCTGGCAACAGAG
                      ____________________________________________________________
consensus                                                  CAAGGAAAATGCTGGCAACAGAG
 
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rJMFF022C01+          AGGATACCGAGAAGATTGCTGAAATCAAGGCCAGCCATGGTGAAGAATTGGTTGGTGCGA
                      ____________________________________________________________
consensus             AGGATACCGAGAAGATTGCTGAAATCAAGGCCAGCCATGGTGAAGAATTGGTTGGTGCGA
 
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rJMFF022C01+          AAATTAGAGTTTGGTGGCCAATGGACCAAGAGTTTTACGAGGGTGAGGTTTCTTCTTTTG
                      ____________________________________________________________
consensus             AAATTAGAGTTTGGTGGCCAATGGACCAAGAGTTTTACGAGGGTGAGGTTTCTTCTTTTG
 
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rJMFF022C01+          ACCCTGTGAAGAAACGGCACAAGGTTGTTTATGCTGATGGTGATATAGAAAAGTTGAATC
                      ____________________________________________________________
consensus             ACCCTGTGAAGAAACGGCACAAGGTTGTTTATGCTGATGGTGATATAGAAAAGTTGAATC
 
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rJMFF022C01+          TTGCTAAGGAACTATGGGAAATGAGTACAGAGATTCCTTCCAACGAAGATCATGAAGCAG
                      ____________________________________________________________
consensus             TTGCTAAGGAACTATGGGAAATGAGTACAGAGATTCCTTCCAACGAAGATCATGAAGCAG
 
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rJMFF022C01+          ATCCTCCGGTTTCATCAGCTATGGATGGGAGGAAGAAAAGAAAAGGCGACTCTTCAAGAA
rJMSF027N20+                                                                    AA
                      ____________________________________________________________
consensus             ATCCTCCGGTTTCATCAGCTATGGATGGGAGGAAGAAAAGAAAAGGCGACTCTTCAAGAA
 
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rJMFF022C01+          AACAAAAGCCCGCCATTTCAGCAACAAAAAGGTCTAGACGCAAAGTACAAGGAGGCAGTG
rJMSF027N20+          AACAAAAGCCCGCCATTTCAGCAACAAAAAGGTCTAGACGCAAAGTACAAGGAGGCAGTG
                      ____________________________________________________________
consensus             AACAAAAGCCCGCCATTTCAGCAACAAAAAGGTCTAGACGCAAAGTACAAGGAGGCAGTG
 
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rJMFF022C01+          GCGGCGTGACTGCAAAATCTCCTAAGCCCGACGACTTCTGGGTTGCAGATGAAGCGAACG
rJMSF027N20+          GCGGCGTGACTGCAAAATCTCCTAAGCCCGACGACTTCTGGGTTGCAGATGAAGCGAACG
                      ____________________________________________________________
consensus             GCGGCGTGACTGCAAAATCTCCTAAGCCCGACGACTTCTGGGTTGCAGATGAAGCGAACG
 
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rJMFF022C01+          ACAACACAGCTACGCAAGGCGAGCAGCCAGGTAACGATGAAAACACTCCTCCACACAAGG
rJMSF027N20+          ACAACACAGCTACGCAAGGCGAGCAGCCAGGTAACGATGAAAACACTCCTCCACACAAGG
                      ____________________________________________________________
consensus             ACAACACAGCTACGCAAGGCGAGCAGCCAGGTAACGATGAAAACACTCCTCCACACAAGG
 
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rJMFF022C01+          AAGAGACTGAAGCTCCTGTAGAGCCATTGGAAACCGTCAACCCGGGCGAAACCCCTACGG
rJMSF027N20+          AAGAGACTGAAGCTCCTGTAGAGCCATTGGAAACCGTCAACCCGGGCGAAACCCCTACGG
                      ____________________________________________________________
consensus             AAGAGACTGAAGCTCCTGTAGAGCCATTGGAAACCGTCAACCCGGGCGAAACCCCTACGG
 
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rJMFF022C01+          CTGTTGCTTGAGCGAGAATACACTAATTTGCGGGGACTAAGACCAGAGAAAGCCTACCCA
rJMSF027N20+          CTGTTGCTTGAGCGAGAATACACTAATTTGCGGGGACTAAGACCAGAGAAAGCCTACCCA
                      ____________________________________________________________
consensus             CTGTTGCTTGAGCGAGAATACACTAATTTGCGGGGACTAAGACCAGAGAAAGCCTACCCA
 
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rJMFF022C01+          AATCATTGATGAGAGGGTGATTAGAGTAGAAAAATGAAGTGGCAAAAATACACTGAGTGT
rJMSF027N20+          AATCATTGATGAGAGGGTGATTAGAGTAGAAAAATGAAGTGGCAAAAATACACTGAGTGT
                      ____________________________________________________________
consensus             AATCATTGATGAGAGGGTGATTAGAGTAGAAAAATGAAGTGGCAAAAATACACTGAGTGT
 
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rJMFF022C01+          GTAAAACTTGTTCTTCTTCACCCCATACAAT                             
rJMSF027N20+          GTAAAACTTGTTCTTCTTCACCCCATACAATAGAAGAAGCGTATTTGCTTGTATTGTGTA
                      ____________________________________________________________
consensus             GTAAAACTTGTTCTTCTTCACCCCATACAATAGAAGAAGCGTATTTGCTTGTATTGTGTA
 
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rJMSF027N20+          ACCTTTTTCTTTTTAAATGTAGTCTTGTTTCGATGTTGTTCTTATTAACAATGAAGTCGG
                      ____________________________________________________________
consensus             ACCTTTTTCTTTTTAAATGTAGTCTTGTTTCGATGTTGTTCTTATTAACAATGAAGTCGG
 
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rJMSF027N20+          ATTAGTCAGTGATGGATATATTGGAAATATATGGCCTAATAATAGGGATCCGGGTCTAGG
                      ____________________________________________________________
consensus             ATTAGTCAGTGATGGATATATTGGAAATATATGGCCTAATAATAGGGATCCGGGTCTAGG
 
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rJMSF027N20+          AGTGCATAGCCCGAGCGCTCGAGGCCCAGAATGATGGGCCTTGACCTAGCCTCACGGGCC
                      ____________________________________________________________
consensus             AGTGCATAGCCCGAGCGCTCGAGGCCCAGAATGATGGGCCTTGACCTAGCCTCACGGGCC
 
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rJMSF027N20+          CACTAGGGGGGCCTCGACTTAGTCTTGTGGCCTACCATGACTTTAGGGGAGTTTGTGGCT
                      ____________________________________________________________
consensus             CACTAGGGGGGCCTCGACTTAGTCTTGTGGCCTACCATGACTTTAGGGGAGTTTGTGGCT