Contig 009979:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004C19Sequence329013464 (3)ref|XP_006346399.1|3e-29PREDICTED: U-box domain-containing protein 26-like [Solanum tuberosum]355009979 (4)ref|XP_008226124.1|4e-07PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67
JMSF017C18Sequence452006540 (5)ref|XP_011007635.1|2e-18PREDICTED: cysteine-rich receptor-like protein kinase 10 [Populus euphratica]760009979 (4)gb|EYU34172.1|4e-57hypothetical protein MIMGU_mgv1a025876mg, partial [Erythranthe guttata]
JMSF025E21Sequence654006540 (5)gb|KJB34790.1|7e-35hypothetical protein B456_006G083900 [Gossypium raimondii]779009979 (4)gb|EYU34172.1|2e-56hypothetical protein MIMGU_mgv1a025876mg, partial [Erythranthe guttata]
JMSF048M19Sequence660006540 (5)gb|KJB34798.1|3e-41hypothetical protein B456_006G084300 [Gossypium raimondii]654009979 (4)gb|EYU34172.1|6e-33hypothetical protein MIMGU_mgv1a025876mg, partial [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017C18+ CTT
                      ____________________________________________________________
consensus CTT
 
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rJMSF017C18+ CGCATTGTACATCACGATGTCAAAGCTAGTAAAATTTTGCTAGATGTAGATTTGAACCCA
rJMSF025E21+ CGCATTGTACATCACGATGTCAAAGCTAGTAAAATTTTGCTAGATGTAGATTTGAACCCA
                      ____________________________________________________________
consensus CGCATTGTACATCACGATGTCAAAGCTAGTAAAATTTTGCTAGATGTAGATTTGAACCCA
 
. : . : . : . : . : . :
rJMSF017C18+ AAAATAACAGATTTTTACATTGCCCGGTTGTTTTCTTTGGATGAAACTCACTGTGAAGAC
rJMSF025E21+ AAAATAACAGATTTTTACATTGCCCGGTTGTTTTCTTTGGATGAAACTCACTGTGAAGAC
                      ____________________________________________________________
consensus AAAATAACAGATTTTTACATTGCCCGGTTGTTTTCTTTGGATGAAACTCACTGTGAAGAC
 
. : . : . : . : . : . :
rJMSF017C18+ AAAGCTTTGGCGGGAACTCTTGGATATATGGCACCAGAATATCTATTGTGGCGTGAACTT
rJMSF025E21+ AAAGCTTTGGCGGGAACTCTTGGATATATGGCACCAGAATATCTATTGTGGCGTGAACTT
                      ____________________________________________________________
consensus AAAGCTTTGGCGGGAACTCTTGGATATATGGCACCAGAATATCTATTGTGGCGTGAACTT
 
. : . : . : . : . : . :
rJMSF017C18+ TCTGTTAAATCAGACGTATATAGTTTTGGAGTGTTAATCTTGGAAATTATAAGTGGACAA
rJMSF025E21+ TCTGTTAAATCAGACGTATATAGTTTTGGAGTGTTAATCTTGGAAATTATAAGTGGACAA
                      ____________________________________________________________
consensus TCTGTTAAATCAGACGTATATAGTTTTGGAGTGTTAATCTTGGAAATTATAAGTGGACAA
 
. : . : . : . : . : . :
rJMSF017C18+ AGATGTTTGGATTATAATAGACCCTTGGCAAATTCTGAGGATCATATGGGATACCTTGCA
rJMSF025E21+ AGATGTTTGGATTATAATAGACCCTTGGCAAATTCTGAGGATCATATGGGATACCTTGCA
                      ____________________________________________________________
consensus AGATGTTTGGATTATAATAGACCCTTGGCAAATTCTGAGGATCATATGGGATACCTTGCA
 
. : . : . : . : . : . :
rJMSF017C18+ AGTTATGCTTGGACACATTGGAAAAATGGGTGTTCTTCAAATGTGATGGATCCCATGTTA
rJMSF048M19+ GCTTGGACACATCGGAAAAATGGGTGTTCTTCAAATGNGATGGATCCCATGCTA
rJMSF025E21+ AGTTATGCTTGGACACATTGGAAAAATGGGTGTTCTTCAAATGTGATGGATCCCATGTTA
                      ____________________________________________________________
consensus AGTTATGCTTGGACACATTGGAAAAATGGGTGTTCTTCAAATGTGATGGATCCCATGTTA
 
. : . : . : . : . : . :
rJMSF017C18+ AGACGAATATCAAGTCCAGTGGATGATATAATTAAATGCATCCAAATTGCTTTGCTGTGT
rJMSF048M19+ AGANGAATATCAAGTCCAGTGGATGNTATAATTAAANGCNTCCAAATNGCTTTGCTGTGT
rJMSF004C19+ T
rJMSF025E21+ AGACGAATATCAAGTCCAGTGGATGATATAATTAAATGCATCCAAATTGCTTTGCTGTGT
                      ____________________________________________________________
consensus AGACGAATATCAAGTCCAGTGGATGATATAATTAAATGCATCCAAATTGCTTTGCTGTGT
 
. : . : . : . : . : . :
rJMSF017C18+ GTTCAAGAAAAGGCTGAAGATAGACCAACAATGGGAGAAGTTGTTCAAATGCTAAGTAAC
rJMSF048M19+ GTTCANGAAAAGGCTGAAGATAGACCAACAATGGGAGAAGTNGTTCAAATGCTAAGTAAC
rJMSF004C19+ GTTCAAGAAAAGGCTGAAGATAGACCAACAATGGGAGAAGTTGTTCAAATGCTAAGTAAC
rJMSF025E21+ GTTCAAGAAAAGGCTGAAGATAGACCAACAATGGGAGAAGTTGTTCAAATGCTAAGTAAC
                      ____________________________________________________________
consensus GTTCAAGAAAAGGCTGAAGATAGACCAACAATGGGAGAAGTTGTTCAAATGCTAAGTAAC
 
. : . : . : . : . : . :
rJMSF017C18+ TTATCAATGAGCCTTCCAATACCCTCAACTCCTGGATATTTTTGTCGTATCAAAAATTCA
rJMSF048M19+ TTATCAATGAGCCTTCCAATACCCTCAACTCCTGGATATTTTTGTCGTATCAAAAANTCA
rJMSF004C19+ TTATCAATGAGCCTTCCAATACCCTCAACTCCTGGATATTTTTGTCGTATCAAAAATTCA
rJMSF025E21+ TTATCAATGAGCCTTCCAATACCCTCAACTCCTGGATATTTTTGTCGTATCAAAAATTCA
                      ____________________________________________________________
consensus TTATCAATGAGCCTTCCAATACCCTCAACTCCTGGATATTTTTGTCGTATCAAAAATTCA
 
. : . : . : . : . : . :
rJMSF017C18+ GATGATTTAGAGGGTTCAATCTATGAGATGTCAACTAGTGATGATGATGATGATTATGAT
rJMSF048M19+ GATGATTTAGAGGGTTCAATCTATGAGATGTCAACTAGTGATGATGATGATGATTATGAT
rJMSF004C19+ GATGATTTAGAGGGTTCAATCTATGAGATGTCAACTAGTGATGATGATGATGATTATGAT
rJMSF025E21+ GATGATTTAGAGGGTTCAATCTATGAGATGTCAACTAGTGATGATGATGATGATTATGAT
                      ____________________________________________________________
consensus GATGATTTAGAGGGTTCAATCTATGAGATGTCAACTAGTGATGATGATGATGATTATGAT
 
. : . : . : . : . : . :
rJMSF017C18+ TATCGCCCCAGATAGCTTCCCA-ACTGATACCCAACTCATCAATCCAACCACATATTGCG
rJMSF048M19+ TATCGCCCCAGATAGCTTCCCACACTGATACCCAACTCATCAATCCAACCACATATTGCG
rJMSF004C19+ TATCGCCCCAGATAGCTTCCCA-ACTGATACCCAACTCATCAATCCAACCACATATTGCG
rJMSF025E21+ TATCGCCCCAGATAGCTTCCCA-ACTGATACCCAACTCATCAATCCAACCACATATTGCG
                      ____________________________________________________________
consensus TATCGCCCCAGATAGCTTCCCA-ACTGATACCCAACTCATCAATCCAACCACATATTGCG
 
. : . : . : . : . : . :
rJMSF017C18+ CTTGCTTTGATTTTGGCTTTGTATTGTTTTCCAATTCTGATATTTGTTTTTAGGTAAATC
rJMSF048M19+ CTTGCTTCGATTTTGGCTTTGTATTGTTTTCCAATTCTGATATTTGTTTNTAGGTAAATC
rJMSF004C19+ CTTGCTTTGATTTTGGCTTTGTATTGTTTTCCAATTCTGATATTTGTTTTTAGGTAAATC
rJMSF025E21+ CTTGCTTTGATTTTGGCTTTGTATTGTTTTCCAATTCTGATATTTGTTTTTAGGTAAATC
                      ____________________________________________________________
consensus CTTGCTTTGATTTTGGCTTTGTATTGTTTTCCAATTCTGATATTTGTTTTTAGGTAAATC
 
. : . : . : . : . : . :
rJMSF017C18+ GAATCTTTTGTTCATTTTACTTTCGTACT
rJMSF048M19+ GAATCNTTTGTTCATNNTACTTTCGTACTTAAATACGATTCACTCACATC
rJMSF004C19+ GAATCTNTTGTTCATTTTACTTTCGTACTTAAATACGATTCACTCACATC
rJMSF025E21+ GAATCTTTTGTTCATTTTACTTTCGTACTTAAATACGATTCACTCACATCACATGTCCTT
                      ____________________________________________________________
consensus GAATCTTTTGTTCATTTTACTTTCGTACTTAAATACGATTCACTCACATCACATGTCCTT